prot_P-wetherbeei_contig17994.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig17994.2.1
Unique Nameprot_P-wetherbeei_contig17994.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length176
Homology
BLAST of mRNA_P-wetherbeei_contig17994.2.1 vs. uniprot
Match: A0A1Y0G8E0_9PROT (Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Sulfuriferula sp. AH1 TaxID=1985873 RepID=A0A1Y0G8E0_9PROT)

HSP 1 Score: 273 bits (698), Expect = 1.440e-91
Identity = 140/173 (80.92%), Postives = 154/173 (89.02%), Query Frame = 0
Query:    3 SIRILGIDPGLRVTGFGVIDKVGTRLTYVTSGCVKSGEGELPERIKVLLEGLSEVIAANRPDQSAIEKVFVNVNPQSTLLLGQARGAAICAAVLAGLPVAEYTALQVKQSVVGAGKAAKEQVQMMVKRLLSLAGDPSPDAADALACAICHAHAGQGLGAFPTKGRRMKDGRLV 175
            +IRILGIDPGLRVTGFGV++K+G RL YVTSGC++SGEGELP+R+KV+L GL EVIA N+P Q AIEKVFVNVNPQSTLLLGQARGAAICAAVL  LPVAEYTALQVKQSVVG G AAK+QVQ MVKRLL+L G PSPDAADALACAICHAH GQGLGA  T G RMK+GRL+
Sbjct:    4 TIRILGIDPGLRVTGFGVLEKIGNRLVYVTSGCIRSGEGELPQRLKVILAGLGEVIAVNQPQQVAIEKVFVNVNPQSTLLLGQARGAAICAAVLHDLPVAEYTALQVKQSVVGNGHAAKDQVQEMVKRLLNLPGVPSPDAADALACAICHAHGGQGLGALATAGYRMKNGRLI 176          
BLAST of mRNA_P-wetherbeei_contig17994.2.1 vs. uniprot
Match: A0A401JFB9_9PROT (Crossover junction endodeoxyribonuclease RuvC n=2 Tax=Sulfuriferula TaxID=1778653 RepID=A0A401JFB9_9PROT)

HSP 1 Score: 268 bits (684), Expect = 1.830e-89
Identity = 138/174 (79.31%), Postives = 151/174 (86.78%), Query Frame = 0
Query:    2 ESIRILGIDPGLRVTGFGVIDKVGTRLTYVTSGCVKSGEGELPERIKVLLEGLSEVIAANRPDQSAIEKVFVNVNPQSTLLLGQARGAAICAAVLAGLPVAEYTALQVKQSVVGAGKAAKEQVQMMVKRLLSLAGDPSPDAADALACAICHAHAGQGLGAFPTKGRRMKDGRLV 175
             SIRILGIDPGLR+TGFGVI+K G R+ Y+TSGC+KSGEGELPER+KV+L  L EVI  N+P Q A+EKVFVNVNPQSTLLLGQARGAAICAAVL  LPVAEYTALQVKQ+VVG G AAKEQVQ MVKRLL+L G PSPDAADALACAICHAH GQGLG F T G R+K+GRLV
Sbjct:    2 NSIRILGIDPGLRITGFGVIEKTGNRIQYLTSGCIKSGEGELPERLKVILLSLREVIQNNQPQQVAVEKVFVNVNPQSTLLLGQARGAAICAAVLEALPVAEYTALQVKQAVVGNGHAAKEQVQEMVKRLLNLPGVPSPDAADALACAICHAHGGQGLGGFATAGYRVKNGRLV 175          
BLAST of mRNA_P-wetherbeei_contig17994.2.1 vs. uniprot
Match: A0A7Y4S5U6_9PROT (Crossover junction endodeoxyribonuclease RuvC n=3 Tax=Sulfuriferula TaxID=1778653 RepID=A0A7Y4S5U6_9PROT)

HSP 1 Score: 267 bits (683), Expect = 2.600e-89
Identity = 137/173 (79.19%), Postives = 153/173 (88.44%), Query Frame = 0
Query:    3 SIRILGIDPGLRVTGFGVIDKVGTRLTYVTSGCVKSGEGELPERIKVLLEGLSEVIAANRPDQSAIEKVFVNVNPQSTLLLGQARGAAICAAVLAGLPVAEYTALQVKQSVVGAGKAAKEQVQMMVKRLLSLAGDPSPDAADALACAICHAHAGQGLGAFPTKGRRMKDGRLV 175
            +IRILGIDPGLRVTGFGVIDK+G RL YVTSGC+KSGEGELP+R+ V+L GL EVI+ ++P Q+A+EKVFVNVNPQSTLLLGQARGAAICAAVL  LPVAEYTALQVKQ+VVG G AAKEQVQ MVKRLL+L G PS DAADALACAICHAH GQGLGA  T G R+K+GRL+
Sbjct:    2 TIRILGIDPGLRVTGFGVIDKIGNRLVYVTSGCIKSGEGELPQRLGVILAGLDEVISLHQPQQAAVEKVFVNVNPQSTLLLGQARGAAICAAVLKNLPVAEYTALQVKQAVVGNGHAAKEQVQEMVKRLLNLPGVPSSDAADALACAICHAHGGQGLGALATAGYRVKNGRLI 174          
BLAST of mRNA_P-wetherbeei_contig17994.2.1 vs. uniprot
Match: A0A1F4AHP4_9PROT (Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_64_14 TaxID=1797482 RepID=A0A1F4AHP4_9PROT)

HSP 1 Score: 261 bits (667), Expect = 8.430e-87
Identity = 132/175 (75.43%), Postives = 150/175 (85.71%), Query Frame = 0
Query:    1 AESIRILGIDPGLRVTGFGVIDKVGTRLTYVTSGCVKSGEGELPERIKVLLEGLSEVIAANRPDQSAIEKVFVNVNPQSTLLLGQARGAAICAAVLAGLPVAEYTALQVKQSVVGAGKAAKEQVQMMVKRLLSLAGDPSPDAADALACAICHAHAGQGLGAFPTKGRRMKDGRLV 175
            A ++RILGIDPGLR+TGFGVIDK G RLTYVTSGC+++  G L ER+K +L+GL EVIA  RP+Q A+EKVFVNVNPQSTLLLGQARG AICAAV+ GLPV+EYTALQVKQ+VVG G AAK+QVQ MVKRLL LAGDP+PDAADALACAICHAH GQG+G   T G RM+ GRLV
Sbjct:    6 APAVRILGIDPGLRITGFGVIDKTGQRLTYVTSGCIRTPAGALSERLKAILDGLDEVIAGCRPEQVALEKVFVNVNPQSTLLLGQARGTAICAAVMHGLPVSEYTALQVKQAVVGKGHAAKDQVQEMVKRLLKLAGDPNPDAADALACAICHAHGGQGMGRLATAGYRMRRGRLV 180          
BLAST of mRNA_P-wetherbeei_contig17994.2.1 vs. uniprot
Match: A0A1G0BXM2_9PROT (Crossover junction endodeoxyribonuclease RuvC n=3 Tax=Betaproteobacteria TaxID=28216 RepID=A0A1G0BXM2_9PROT)

HSP 1 Score: 261 bits (666), Expect = 1.420e-86
Identity = 132/171 (77.19%), Postives = 150/171 (87.72%), Query Frame = 0
Query:    5 RILGIDPGLRVTGFGVIDKVGTRLTYVTSGCVKSGEGELPERIKVLLEGLSEVIAANRPDQSAIEKVFVNVNPQSTLLLGQARGAAICAAVLAGLPVAEYTALQVKQSVVGAGKAAKEQVQMMVKRLLSLAGDPSPDAADALACAICHAHAGQGLGAFPTKGRRMKDGRLV 175
            RILGIDPGLR+TGFG++DK G +L+YV SGC+K+ +GELPER+KV+L  LSEVIA +RPDQ+A+EKVFVNVNPQSTLLLGQARGAAICAAVLA LPVAEYTALQVKQ+VVG+G A KEQVQ MVKRLL L+G P  DAADALACAICHAH G GLGA  TKG R++ GRLV
Sbjct:   15 RILGIDPGLRITGFGILDKTGQQLSYVASGCIKTPDGELPERLKVILNSLSEVIAQHRPDQAAVEKVFVNVNPQSTLLLGQARGAAICAAVLANLPVAEYTALQVKQAVVGSGHAKKEQVQEMVKRLLKLSGTPGTDAADALACAICHAHGGLGLGALATKGFRVRHGRLV 185          
BLAST of mRNA_P-wetherbeei_contig17994.2.1 vs. uniprot
Match: A0A522X4L9_9PROT (Crossover junction endodeoxyribonuclease RuvC n=2 Tax=Nitrosomonadales TaxID=32003 RepID=A0A522X4L9_9PROT)

HSP 1 Score: 260 bits (665), Expect = 2.470e-86
Identity = 132/173 (76.30%), Postives = 151/173 (87.28%), Query Frame = 0
Query:    2 ESIRILGIDPGLRVTGFGVIDKVGTRLTYVTSGCVKSGEGELPERIKVLLEGLSEVIAANRPDQSAIEKVFVNVNPQSTLLLGQARGAAICAAVLAGLPVAEYTALQVKQSVVGAGKAAKEQVQMMVKRLLSLAGDPSPDAADALACAICHAHAGQGLGAFPTKGRRMKDGRL 174
             +IRILGIDPGLRVTGFGV+DKVG +L YV SGC+K+ +GELPER+KV+L  L EVIA ++P Q A+EKVFVNVNPQSTLLLGQARGAAICAAVLA LPV+EYTALQVKQ+VVG G A KEQVQ+MV+RLL+L+G P PDAADALACAICHAH G GLGA  TKG RM++GRL
Sbjct:   18 STIRILGIDPGLRVTGFGVLDKVGQQLVYVASGCIKTPDGELPERLKVILNSLGEVIAQHQPGQVAVEKVFVNVNPQSTLLLGQARGAAICAAVLANLPVSEYTALQVKQAVVGNGHADKEQVQLMVQRLLNLSGTPGPDAADALACAICHAHGGTGLGALATKGMRMRNGRL 190          
BLAST of mRNA_P-wetherbeei_contig17994.2.1 vs. uniprot
Match: A0A1F3WY67_9PROT (Crossover junction endodeoxyribonuclease RuvC n=2 Tax=Betaproteobacteria TaxID=28216 RepID=A0A1F3WY67_9PROT)

HSP 1 Score: 259 bits (662), Expect = 5.760e-86
Identity = 130/172 (75.58%), Postives = 149/172 (86.63%), Query Frame = 0
Query:    4 IRILGIDPGLRVTGFGVIDKVGTRLTYVTSGCVKSGEGELPERIKVLLEGLSEVIAANRPDQSAIEKVFVNVNPQSTLLLGQARGAAICAAVLAGLPVAEYTALQVKQSVVGAGKAAKEQVQMMVKRLLSLAGDPSPDAADALACAICHAHAGQGLGAFPTKGRRMKDGRLV 175
            +RILGIDPGLR+TGFGV+DKVG +L+YV SGC+K+ +GELPER+K +L+ L EVIA ++P Q A+EKVFVN+NPQSTL LGQARGAAICAAVLA LPVAEYTALQVKQ+VVG G A KEQVQ MVKRLL L+G PSPDAADALACA+CHAH GQGLG   T G RMK+GRLV
Sbjct:   14 VRILGIDPGLRITGFGVLDKVGQQLSYVASGCIKTPDGELPERLKAILDSLGEVIAQHQPQQVAVEKVFVNINPQSTLALGQARGAAICAAVLANLPVAEYTALQVKQAVVGNGHAKKEQVQEMVKRLLKLSGIPSPDAADALACAVCHAHGGQGLGVLATAGYRMKNGRLV 185          
BLAST of mRNA_P-wetherbeei_contig17994.2.1 vs. uniprot
Match: D9SCK9_GALCS (Crossover junction endodeoxyribonuclease RuvC n=11 Tax=Nitrosomonadales TaxID=32003 RepID=D9SCK9_GALCS)

HSP 1 Score: 257 bits (657), Expect = 3.940e-85
Identity = 132/173 (76.30%), Postives = 149/173 (86.13%), Query Frame = 0
Query:    3 SIRILGIDPGLRVTGFGVIDKVGTRLTYVTSGCVKSGEGELPERIKVLLEGLSEVIAANRPDQSAIEKVFVNVNPQSTLLLGQARGAAICAAVLAGLPVAEYTALQVKQSVVGAGKAAKEQVQMMVKRLLSLAGDPSPDAADALACAICHAHAGQGLGAFPTKGRRMKDGRLV 175
            SIRILGIDPGLR+TGFGVIDKVG +L YV SGC+K+  G+LPER+KV+L  L  VI  ++PDQ+A+EKVFVNVNPQSTLLLGQARGAAICAAVLA LPV EYTALQVKQ+VVG G A KEQVQ+MV+RLL L+G PSPDAADALACAICHAH G GLGA  TKG R++ GRLV
Sbjct:   18 SIRILGIDPGLRITGFGVIDKVGQQLHYVASGCIKTPAGDLPERLKVILNSLGVVITQHQPDQAAVEKVFVNVNPQSTLLLGQARGAAICAAVLANLPVGEYTALQVKQAVVGNGHADKEQVQLMVQRLLKLSGTPSPDAADALACAICHAHGGLGLGALATKGFRVRGGRLV 190          
BLAST of mRNA_P-wetherbeei_contig17994.2.1 vs. uniprot
Match: A0A2Z6GBN2_9PROT (Crossover junction endodeoxyribonuclease RuvC n=9 Tax=Bacteria TaxID=2 RepID=A0A2Z6GBN2_9PROT)

HSP 1 Score: 256 bits (655), Expect = 4.620e-85
Identity = 132/171 (77.19%), Postives = 148/171 (86.55%), Query Frame = 0
Query:    5 RILGIDPGLRVTGFGVIDKVGTRLTYVTSGCVKSGEGELPERIKVLLEGLSEVIAANRPDQSAIEKVFVNVNPQSTLLLGQARGAAICAAVLAGLPVAEYTALQVKQSVVGAGKAAKEQVQMMVKRLLSLAGDPSPDAADALACAICHAHAGQGLGAFPTKGRRMKDGRLV 175
            RILGIDPGLR+TGFGV+DK G +L+YV SGC+K+ +GELPER+KV+L  L EVIA ++P Q A+EKVFVNVNPQSTLLLGQARGAAICAAV A LPVAEYTALQVKQSVVG G AAKEQVQ MVKRLL+L+G PSPDAADALACAICHAH G GLG   TKG R+K GRL+
Sbjct:    4 RILGIDPGLRITGFGVLDKQGQQLSYVASGCIKTPDGELPERLKVILLSLGEVIALHQPQQVAVEKVFVNVNPQSTLLLGQARGAAICAAVSAHLPVAEYTALQVKQSVVGNGHAAKEQVQEMVKRLLNLSGTPSPDAADALACAICHAHGGMGLGGLATKGFRVKGGRLI 174          
BLAST of mRNA_P-wetherbeei_contig17994.2.1 vs. uniprot
Match: D5CMR6_SIDLE (Crossover junction endodeoxyribonuclease RuvC n=8 Tax=root TaxID=1 RepID=D5CMR6_SIDLE)

HSP 1 Score: 256 bits (655), Expect = 6.270e-85
Identity = 131/174 (75.29%), Postives = 149/174 (85.63%), Query Frame = 0
Query:    2 ESIRILGIDPGLRVTGFGVIDKVGTRLTYVTSGCVKSGEGELPERIKVLLEGLSEVIAANRPDQSAIEKVFVNVNPQSTLLLGQARGAAICAAVLAGLPVAEYTALQVKQSVVGAGKAAKEQVQMMVKRLLSLAGDPSPDAADALACAICHAHAGQGLGAFPTKGRRMKDGRLV 175
             SIRILGIDPGLR+TGFGV+DK G +L YV SGC+K+ +GELPER+KV+L  L EVIA ++P+Q A+EKVFVNVNPQSTLLLGQARGAAICAAV A LPVAEYTALQVKQ+VVG G A KEQVQ MV+RLL L+G PSPDAADALACAICHAH G G+GA  TKG R++ GRLV
Sbjct:   10 SSIRILGIDPGLRITGFGVVDKEGQQLHYVASGCIKTPDGELPERLKVILASLGEVIAQHKPEQVAVEKVFVNVNPQSTLLLGQARGAAICAAVQADLPVAEYTALQVKQAVVGNGHADKEQVQAMVQRLLKLSGTPSPDAADALACAICHAHGGMGMGALATKGFRVRKGRLV 183          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17994.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Y0G8E0_9PROT1.440e-9180.92Crossover junction endodeoxyribonuclease RuvC n=1 ... [more]
A0A401JFB9_9PROT1.830e-8979.31Crossover junction endodeoxyribonuclease RuvC n=2 ... [more]
A0A7Y4S5U6_9PROT2.600e-8979.19Crossover junction endodeoxyribonuclease RuvC n=3 ... [more]
A0A1F4AHP4_9PROT8.430e-8775.43Crossover junction endodeoxyribonuclease RuvC n=1 ... [more]
A0A1G0BXM2_9PROT1.420e-8677.19Crossover junction endodeoxyribonuclease RuvC n=3 ... [more]
A0A522X4L9_9PROT2.470e-8676.30Crossover junction endodeoxyribonuclease RuvC n=2 ... [more]
A0A1F3WY67_9PROT5.760e-8675.58Crossover junction endodeoxyribonuclease RuvC n=2 ... [more]
D9SCK9_GALCS3.940e-8576.30Crossover junction endodeoxyribonuclease RuvC n=11... [more]
A0A2Z6GBN2_9PROT4.620e-8577.19Crossover junction endodeoxyribonuclease RuvC n=9 ... [more]
D5CMR6_SIDLE6.270e-8575.29Crossover junction endodeoxyribonuclease RuvC n=8 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002176Crossover junction endodeoxyribonuclease RuvCPRINTSPR00696RSOLVASERUVCcoord: 63..79
score: 42.86
coord: 109..128
score: 57.86
coord: 7..20
score: 69.39
coord: 85..101
score: 52.94
coord: 140..152
score: 73.63
IPR002176Crossover junction endodeoxyribonuclease RuvCPFAMPF02075RuvCcoord: 6..152
e-value: 7.4E-53
score: 178.4
IPR002176Crossover junction endodeoxyribonuclease RuvCTIGRFAMTIGR00228TIGR00228coord: 6..157
e-value: 1.2E-56
score: 188.9
IPR002176Crossover junction endodeoxyribonuclease RuvCPANTHERPTHR30194CROSSOVER JUNCTION ENDODEOXYRIBONUCLEASE RUVCcoord: 5..156
IPR002176Crossover junction endodeoxyribonuclease RuvCHAMAPMF_00034RuvCcoord: 4..155
score: 46.212719
IPR002176Crossover junction endodeoxyribonuclease RuvCCDDcd16962RuvCcoord: 6..154
e-value: 1.87481E-73
score: 215.783
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 6..158
e-value: 4.8E-48
score: 165.1
IPR020563Crossover junction endodeoxyribonuclease RuvC, magnesium-binding sitePROSITEPS01321RUVCcoord: 115..149
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 5..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17994contigP-wetherbeei_contig17994:513..1040 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17994.2.1mRNA_P-wetherbeei_contig17994.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig17994 513..1040 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig17994.2.1 ID=prot_P-wetherbeei_contig17994.2.1|Name=mRNA_P-wetherbeei_contig17994.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=176bp
AESIRILGIDPGLRVTGFGVIDKVGTRLTYVTSGCVKSGEGELPERIKVL
LEGLSEVIAANRPDQSAIEKVFVNVNPQSTLLLGQARGAAICAAVLAGLP
VAEYTALQVKQSVVGAGKAAKEQVQMMVKRLLSLAGDPSPDAADALACAI
CHAHAGQGLGAFPTKGRRMKDGRLV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002176X-over_junc_endoDNase_RuvC
IPR036397RNaseH_sf
IPR020563X-over_junc_endoDNase_Mg_BS
IPR012337RNaseH-like_sf