prot_P-wetherbeei_contig17788.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig17788.2.1
Unique Nameprot_P-wetherbeei_contig17788.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length139
Homology
BLAST of mRNA_P-wetherbeei_contig17788.2.1 vs. uniprot
Match: A0A352KFV1_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A352KFV1_9PROT)

HSP 1 Score: 155 bits (391), Expect = 6.490e-46
Identity = 81/139 (58.27%), Postives = 104/139 (74.82%), Query Frame = 0
Query:    1 MNLLDQPIRRSRKMSMTSMIDVVFLLLIFFMLINTFGSTQVLRFATPAGERKSIEKDFSLAPVFIRADNSIDIDGKTFPVDALKGEMQKIKSRATEVTLMIVVEPGAKNQALIHVIEAARSTGLKNIAMKKLKDAEAIL 139
            M L ++PIR SR++++T +IDVVFLLLIFFML++TF  TQ+LRF TPAGER+S E+ F L PV + A  SI IDG+T   D LK EM+KI   A EVT++++ EPGAK Q LI  +EAARS G+ NIAMKK  DA ++L
Sbjct:    1 MALFEEPIRHSRRLTLTPLIDVVFLLLIFFMLVSTFSDTQILRFVTPAGERQSTEQQFELVPVLLSAKGSISIDGRTIAPDLLKLEMEKIAVAADEVTVVMIAEPGAKTQLLIAAVEAARSAGITNIAMKKEADARSLL 139          
BLAST of mRNA_P-wetherbeei_contig17788.2.1 vs. uniprot
Match: A0A2N3E0C6_9PROT (Biopolymer transporter ExbD n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-12 TaxID=2013658 RepID=A0A2N3E0C6_9PROT)

HSP 1 Score: 90.9 bits (224), Expect = 9.230e-21
Identity = 48/131 (36.64%), Postives = 80/131 (61.07%), Query Frame = 0
Query:    3 LLDQPIRRSRKMSMTSMIDVVFLLLIFFMLINTFGSTQVLRFATPAGERKSIEKDFSLAPVFIRADNSIDIDGKTFPVDALKGEMQKIKSRATEVTLMIVVEPGAKNQALIHVIEAARSTGLKNIAMKKLK 133
            + ++P+RR    S+T +IDVVFLLLIFFML  +F  TQ L   TPA    ++ KD  +  +++  D ++ IDGK     AL   ++++    T++T+ I+ E G++ QA +  +EAAR +G KN+   +++
Sbjct:    1 MFEEPVRRRGMASLTPLIDVVFLLLIFFMLTTSFLQTQSLAVVTPAPSADALPKDARVVEIWLMGDGTLRIDGKPVLRAALAEGVKEVIGERTDMTVTILAEKGSRTQAFVAAVEAARQSGAKNVGTARVE 131          
BLAST of mRNA_P-wetherbeei_contig17788.2.1 vs. uniprot
Match: A0A2N3C1S7_9PROT (Uncharacterized protein n=2 Tax=unclassified Alphaproteobacteria TaxID=33807 RepID=A0A2N3C1S7_9PROT)

HSP 1 Score: 88.6 bits (218), Expect = 1.230e-19
Identity = 49/132 (37.12%), Postives = 76/132 (57.58%), Query Frame = 0
Query:    2 NLLDQPIRRSRKMSMTSMIDVVFLLLIFFMLINTFGSTQVLRFATPAGERKSIEKDFSLAPVFIRADNSIDIDGKTFPVDALKGEMQKIKSRATEVTLMIVVEPGAKNQALIHVIEAARSTGLKNIAMKKLK 133
            ++ D+P R+    S+T +IDVVFLLLIFFML  +F  TQ L   TPA     + KD  +  +++  D SI IDGK     AL   +        ++T+ I+ E G++ QAL+  +EAAR +G K++   +++
Sbjct:   20 HMFDEPTRKRGMASLTPLIDVVFLLLIFFMLTTSFLQTQSLSVVTPAPSAADLPKDARVVEIWLNGDGSIAIDGKPIERAALTQGLNAAIGERKDITVTILAERGSRTQALVAAVEAARQSGAKSVGTARVE 151          
BLAST of mRNA_P-wetherbeei_contig17788.2.1 vs. uniprot
Match: A0A2E1Q736_9PROT (Uncharacterized protein n=4 Tax=Proteobacteria TaxID=1224 RepID=A0A2E1Q736_9PROT)

HSP 1 Score: 88.6 bits (218), Expect = 1.260e-19
Identity = 48/133 (36.09%), Postives = 78/133 (58.65%), Query Frame = 0
Query:    1 MNLLDQPIRRSRKMSMTSMIDVVFLLLIFFMLINTFGSTQVLRFATPAGERKSIEKDFSLAPVFIRADNSIDIDGKTFPVDALKGEMQKIKSRATEVTLMIVVEPGAKNQALIHVIEAARSTGLKNIAMKKLK 133
            +++ ++PIR+    S+T +IDVVFLLLIFFML  +F   Q L   TPA     + KD  +  +++  D SI IDG+     AL   ++       ++T+ I+ E G++ QAL+  +EAAR +G KN+   +++
Sbjct:   20 LSMFEEPIRKRGMASLTPLIDVVFLLLIFFMLTTSFLQEQSLSVVTPAPSADELPKDARVVEIWLNGDGSIAIDGEPVERAALSEGLKAAIGERKDITVTILAEKGSRTQALVSAVEAARESGAKNVGTARVE 152          
BLAST of mRNA_P-wetherbeei_contig17788.2.1 vs. uniprot
Match: A7HX65_PARL1 (Biopolymer transport protein ExbD/TolR n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) TaxID=402881 RepID=A7HX65_PARL1)

HSP 1 Score: 85.5 bits (210), Expect = 1.180e-18
Identity = 45/131 (34.35%), Postives = 76/131 (58.02%), Query Frame = 0
Query:    3 LLDQPIRRSRKMSMTSMIDVVFLLLIFFMLINTFGSTQVLRFATPAGERKSIEKDFSLAPVFIRADNSIDIDGKTFPVDALKGEMQKIKSRATEVTLMIVVEPGAKNQALIHVIEAARSTGLKNIAMKKLK 133
            + ++P+RR    S+T +IDVVFLLLIFFML  +F  TQ L   TPA     +  D  +  +++  D ++ +DGK     AL   +++      ++T+ I+ E G++ QAL+  +EAAR +G K +   +++
Sbjct:    1 MFEEPVRRRGMASLTPLIDVVFLLLIFFMLTTSFMQTQSLSVVTPAPSADELPTDARVVEIWLMGDGTLRLDGKPVERTALTASLREAIGERKDMTVTILAEKGSRTQALVAAVEAARQSGAKAVGTARVE 131          
BLAST of mRNA_P-wetherbeei_contig17788.2.1 vs. uniprot
Match: A0A2D4VIU1_9HYPH (Biopolymer transporter ExbD n=2 Tax=Parvibaculum TaxID=256616 RepID=A0A2D4VIU1_9HYPH)

HSP 1 Score: 85.5 bits (210), Expect = 1.270e-18
Identity = 45/129 (34.88%), Postives = 74/129 (57.36%), Query Frame = 0
Query:    5 DQPIRRSRKMSMTSMIDVVFLLLIFFMLINTFGSTQVLRFATPAGERKSIEKDFSLAPVFIRADNSIDIDGKTFPVDALKGEMQKIKSRATEVTLMIVVEPGAKNQALIHVIEAARSTGLKNIAMKKLK 133
            D P++R R MS+T +IDVVF LLIFFML  +F  TQ L   TPA ++K + +D  +  +++  D S+ +DG       L   ++      T++T+ I+ E  ++ Q L+  +EAAR  G  N+   +++
Sbjct:    6 DVPVKRRRMMSLTPLIDVVFQLLIFFMLTTSFLQTQALSVVTPAADQKELPEDARVVEIWLMGDGSLRVDGDPVSSAGLADAVRARIGERTDMTVTILAERDSRTQQLVRAVEAAREAGATNVGTARVE 134          
BLAST of mRNA_P-wetherbeei_contig17788.2.1 vs. uniprot
Match: A0A2D8RV27_9HYPH (Uncharacterized protein n=1 Tax=Parvibaculum sp. TaxID=2024848 RepID=A0A2D8RV27_9HYPH)

HSP 1 Score: 85.9 bits (211), Expect = 1.380e-18
Identity = 48/131 (36.64%), Postives = 75/131 (57.25%), Query Frame = 0
Query:    3 LLDQPIRRSRKMSMTSMIDVVFLLLIFFMLINTFGSTQVLRFATPAGERKSIEKDFSLAPVFIRADNSIDIDGKTFPVDALKGEMQKIKSRATEVTLMIVVEPGAKNQALIHVIEAARSTGLKNIAMKKLK 133
            + + P R+    S+T +IDVVFLLLIFFML  +F  TQ L   TPA   + + KD  +  +++  D SI IDG      AL   ++       ++T+ I+ E G++ QAL+  +EAAR +G KN+   +++
Sbjct:   21 MFEAPPRKRGMASLTPLIDVVFLLLIFFMLTTSFLQTQSLSVVTPAPSVEDLPKDARVVEIWLNGDGSIAIDGTPIERKALPEGLKTAIGERNDITVTILAEKGSRTQALVAAVEAARQSGAKNVGTARVE 151          
BLAST of mRNA_P-wetherbeei_contig17788.2.1 vs. uniprot
Match: A0A2A5ET18_9HYPH (Uncharacterized protein n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2A5ET18_9HYPH)

HSP 1 Score: 82.8 bits (203), Expect = 1.290e-17
Identity = 48/131 (36.64%), Postives = 77/131 (58.78%), Query Frame = 0
Query:    3 LLDQPIRRSRKMSMTSMIDVVFLLLIFFMLINTFGSTQVLRFATPAGERKSIEKDFSLAPVFIRADNSIDIDGKTFPVDALKGEMQKIKSRATEVTLMIVVEPGAKNQALIHVIEAARSTGLKNIAMKKLK 133
            + D P+ + R +S+T +IDVVFLLLIFFML  +F  TQ L   TPA   + +E D  +  V++ +D +  +DG+   ++ L   +++      E  + I+VE GA  Q LI  IEAAR+ G ++I   +++
Sbjct:    1 MFDVPVHKKRIVSLTPLIDVVFLLLIFFMLATSFIQTQALAVLTPAPSPEEVETDRHVVEVWVLSDGTHRLDGEVITLETLSDGIRRNLGGDPEAVVSILVEKGAAVQPLIGAIEAARNGGAQSIGTSRVE 131          
BLAST of mRNA_P-wetherbeei_contig17788.2.1 vs. uniprot
Match: A0A2N3E8V9_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-11 TaxID=2013657 RepID=A0A2N3E8V9_9PROT)

HSP 1 Score: 79.7 bits (195), Expect = 2.100e-16
Identity = 44/131 (33.59%), Postives = 72/131 (54.96%), Query Frame = 0
Query:    3 LLDQPIRRSRKMSMTSMIDVVFLLLIFFMLINTFGSTQVLRFATPAGERKSIEKDFSLAPVFIRADNSIDIDGKTFPVDALKGEMQKIKSRATEVTLMIVVEPGAKNQALIHVIEAARSTGLKNIAMKKLK 133
            + D+P+RR    S+T +IDVVFLLLIFFML  +F  TQ L   TPA     +  D  +  +++  D ++ +DG     + L   ++       ++T+ I+ E G+K QA +  IEAAR  G  ++   +++
Sbjct:    1 MFDEPVRRRNMASLTPLIDVVFLLLIFFMLTTSFLKTQSLSVVTPAPSADELPTDARVVEIWLMGDGTLRVDGTPVEREGLVEAVKAGIGARKDMTVTILAESGSKTQAFVSAIEAARQAGAHDVGTARVE 131          
BLAST of mRNA_P-wetherbeei_contig17788.2.1 vs. uniprot
Match: A0A2A4S8V0_9HYPH (Biopolymer transporter ExbD n=2 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2A4S8V0_9HYPH)

HSP 1 Score: 79.3 bits (194), Expect = 3.880e-16
Identity = 48/131 (36.64%), Postives = 75/131 (57.25%), Query Frame = 0
Query:    3 LLDQPIRRSRKMSMTSMIDVVFLLLIFFMLINTFGSTQVLRFATPA-GERKSIEKDFSLAPVFIRADNSIDIDGKTFPVDALKGEMQKIKSRATEVTLMIVVEPGAKNQALIHVIEAARSTGLKNIAMKKL 132
            L D+P+ R R +S+T +IDVVFLLLIFFML +TF  TQ L   TPA  E + ++ D  +  + + +D  + IDGKT  V  L+ +++       E  + ++ E  A  Q LI  ++AAR  G   ++  ++
Sbjct:   12 LFDEPVGRKRVLSLTPLIDVVFLLLIFFMLASTFMKTQTLTVITPAPDESEEVDTDRVVIELGVHSDGHLTIDGKTVLVGNLEDKLKARIKENPEAIVSVLAEKDALVQPLIWAVDAARRAGADTVSTSRV 142          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17788.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A352KFV1_9PROT6.490e-4658.27Uncharacterized protein n=1 Tax=Alphaproteobacteri... [more]
A0A2N3E0C6_9PROT9.230e-2136.64Biopolymer transporter ExbD n=1 Tax=Alphaproteobac... [more]
A0A2N3C1S7_9PROT1.230e-1937.12Uncharacterized protein n=2 Tax=unclassified Alpha... [more]
A0A2E1Q736_9PROT1.260e-1936.09Uncharacterized protein n=4 Tax=Proteobacteria Tax... [more]
A7HX65_PARL11.180e-1834.35Biopolymer transport protein ExbD/TolR n=1 Tax=Par... [more]
A0A2D4VIU1_9HYPH1.270e-1834.88Biopolymer transporter ExbD n=2 Tax=Parvibaculum T... [more]
A0A2D8RV27_9HYPH1.380e-1836.64Uncharacterized protein n=1 Tax=Parvibaculum sp. T... [more]
A0A2A5ET18_9HYPH1.290e-1736.64Uncharacterized protein n=1 Tax=Rhodobiaceae bacte... [more]
A0A2N3E8V9_9PROT2.100e-1633.59Uncharacterized protein n=1 Tax=Alphaproteobacteri... [more]
A0A2A4S8V0_9HYPH3.880e-1636.64Biopolymer transporter ExbD n=2 Tax=Rhodobiaceae b... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 125..139
NoneNo IPR availableGENE3D3.30.420.270coord: 61..129
e-value: 1.1E-5
score: 27.5
IPR003400Biopolymer transport protein ExbD/TolRPFAMPF02472ExbDcoord: 11..128
e-value: 1.4E-19
score: 70.6
IPR003400Biopolymer transport protein ExbD/TolRPANTHERPTHR30558EXBD MEMBRANE COMPONENT OF PMF-DRIVEN MACROMOLECULE IMPORT SYSTEMcoord: 10..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17788contigP-wetherbeei_contig17788:831..1247 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17788.2.1mRNA_P-wetherbeei_contig17788.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig17788 831..1250 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig17788.2.1 ID=prot_P-wetherbeei_contig17788.2.1|Name=mRNA_P-wetherbeei_contig17788.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=139bp
MNLLDQPIRRSRKMSMTSMIDVVFLLLIFFMLINTFGSTQVLRFATPAGE
RKSIEKDFSLAPVFIRADNSIDIDGKTFPVDALKGEMQKIKSRATEVTLM
IVVEPGAKNQALIHVIEAARSTGLKNIAMKKLKDAEAIL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003400ExbD