prot_P-wetherbeei_contig1767.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1767.1.1
Unique Nameprot_P-wetherbeei_contig1767.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length683
Homology
BLAST of mRNA_P-wetherbeei_contig1767.1.1 vs. uniprot
Match: A0A6H5K0L8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0L8_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 9.880e-24
Identity = 149/482 (30.91%), Postives = 198/482 (41.08%), Query Frame = 0
Query:    1 RELSCCSWCPDGNSFAAGFADGSYAVWDSNKSAAPLLRIDRTAAATASPLSAGGEETGPYCWIRTPVISLQWVPIPRGGXXXXXXSNCKLSGVTWGLVVAGGLQIDEPSEADGVSLLLSSPPPDDGAXXXXXXXXXWGPRSRSRSHKLSRAASSSKGIAPGTPQWQAAELPLASGNERLADVRIVSIGGGG--------------------LAEGDRAVEAAAAASNW-----ELTLVALVTSTRSVGGVGAALAAREQWADIVMCGARTAADGGFVARPPSPLPGHFSTAGAVTTVVSAGLRPAMDLVNFMSCTLEEPGRGSSSGGXXXXSTGAGDPPWLSGGGARWSRSVLAPRRDEALAVSELLVFGHADGALTFYEGSGPAAWGDPRLAVSMG--IEEEGPSTLVPMGAVPLGRWPGVSGEILGGGXXXXXXXXXXXXVTAVDVLVERDHDPRAA---LDACFVAAGLAGGAVAVLRL 452
             E++  +  P G +FAAGFA G YAV+  + S +    + R         S   E  GP   +RT V  +QWV +   G            G T GLVVAGG++I+E  E DGVSLL+ S                 G              +++K          A  +P A G ERL+ V  V  G G                       +G    E AAA  +      EL ++ LV       G    L  R   + I  C  RT+     +   P     H S    VT V    L  +  +++FM+C   E        G    +     PP L GG  RW  SV + RRDEAL  SELLV GH+DG+L+F+E  GPA+  D  + +S G  +  E PS  V +G+VP     G+     G G            VTA+DV VERDH   A     +AC+VA GL  G   V+ L
Sbjct:  315 HEVTSLALHPSGEAFAAGFAAGCYAVFSVSSSPSHEADLPRWVREVGDDGSCPRE--GPTI-VRTAVSLVQWVRVRGAGV-----------GRTSGLVVAGGVEIEEGEEPDGVSLLVLS----------TEAVGARGXXXXXXXXXXXDVVTAAKAALE-----TAVFVPFAMGQERLSHVHCVLSGAGAPTQEPHWAGTRSSGDLSEDASVDGKDEPEPAAAQEDEVEVVEELVVLGLVKWNEEFLGDDGRLHFRLA-SSIQACPIRTSPYVALLQLAPERFGPHLSGFATVTAVACTPLLSSSTILDFMTCLGAEQAEEEGQNGSQTTA-----PPLLRGGYLRWPDSVPSRRRDEALGTSELLVAGHSDGSLSFWECCGPASRQDA-VCLSEGRVVMREVPSGAVLLGSVPAA---GLGSPEEGAGNAA---------VTALDVWVERDHVAAAVPAGRNACWVAVGLESGDARVIVL 748          
BLAST of mRNA_P-wetherbeei_contig1767.1.1 vs. uniprot
Match: D8LBN4_ECTSI (V-SNARE coiled-coil homology domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBN4_ECTSI)

HSP 1 Score: 116 bits (291), Expect = 4.190e-23
Identity = 154/489 (31.49%), Postives = 207/489 (42.33%), Query Frame = 0
Query:    1 RELSCCSWCPDGNSFAAGFADGSYAVWDSNKSAAPLLRIDRTAAATASPLSAGGEETGPYCWIRTPVISLQWVPIPRGGXXXXXXSNCKLSGVTWGLVVAGGLQIDEPSEADGVSLLLSSPPPDDGAXXXXXXXXXWGPRSRSRSHKLSRAASSSKGIAPGTPQWQAAELPLASGNERLADVRIVSIGGGG----------LAEGDRAVEA---------AAAASN------WELTLVALVTSTRSVGGVGAALAAREQWADIVMCGARTAADGGFVARPPSPLPGHFSTAGAVTTVVSAGLRPAMDLVNFMSCT----LEEPGRGSSSGGXXXXSTGAGDPPWLSGGGARWSRSVLAPRRDEALAVSELLVFGHADGALTFYEGSGPAAWGDPRLAVSMG--IEEEGPSTLVPMGAVPLGRWPGVSGEILGGGXXXXXXXXXXXXVTAVDVLVERDHDPRAA------LDACFVAAGLAGGAVAVLRL 452
            RE++  +  P G +FAAGFA G YAV+  + S +      R         S   E  GP   +RT V  ++WV +   G           +G T GLVVAGG++I+E  E DGVSLL+ S                 G R                  A       A  +P A G ERL+ V  V  G G            + GD + +A         +AAA         EL ++ LV       G    L  R   + I  C  +T+     +   P     H S    VT V S  L  +  +++FM+C     ++E GR  S       +T +   P L GG  RW  SV + RRDEAL  SELLV GH+DG+L+F+E  GPA+  D  + +S G  +  E PS  V +G+VP     G+     G G            VTA+DV VERDH   AA       +AC+VA GL  G   V+ L
Sbjct:  286 REVTSLALHPSGEAFAAGFAAGCYAVFSVSSSPSHETGPPRWVREVGDDGSCPRE--GPTI-VRTAVSLVRWVRVRGAG-----------AGRTSGLVVAGGVEIEEGEEPDGVSLLVPS-------------SEAVGARGXXXXXXXXXXXXXXVVTAAKAALETAVFVPFAMGQERLSHVHCVLSGTGAPTREPRRAGTRSSGDLSEDARVGGKDEPDSAAAQEDEVEVAEELVVLGLVKWNEEFLGDDGRLHFRLA-SSIQACPIQTSPYVALLQLAPERFGPHLSGFATVTAVASTPLLSSSTILDFMTCLGAEQVQEEGRNGSQ------TTAS---PLLRGGYLRWPDSVPSRRRDEALGTSELLVAGHSDGSLSFWECCGPASRQDA-VCLSEGRVVMREVPSGTVLLGSVPAA---GLGSPEEGAGNAA---------VTALDVWVERDHVAAAAGAAAAGRNACWVAVGLESGDARVIVL 724          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1767.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K0L8_9PHAE9.880e-2430.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBN4_ECTSI4.190e-2331.49V-SNARE coiled-coil homology domain-containing pro... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 509..528
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..170
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 294..317
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 479..531
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 1..28
score: 9.171722
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 4..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1767contigP-wetherbeei_contig1767:14..2062 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1767.1.1mRNA_P-wetherbeei_contig1767.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1767 14..2064 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1767.1.1 ID=prot_P-wetherbeei_contig1767.1.1|Name=mRNA_P-wetherbeei_contig1767.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=683bp
RELSCCSWCPDGNSFAAGFADGSYAVWDSNKSAAPLLRIDRTAAATASPL
SAGGEETGPYCWIRTPVISLQWVPIPRGGGGGGGGSNCKLSGVTWGLVVA
GGLQIDEPSEADGVSLLLSSPPPDDGAGAGGSGSGRWGPRSRSRSHKLSR
AASSSKGIAPGTPQWQAAELPLASGNERLADVRIVSIGGGGLAEGDRAVE
AAAAASNWELTLVALVTSTRSVGGVGAALAAREQWADIVMCGARTAADGG
FVARPPSPLPGHFSTAGAVTTVVSAGLRPAMDLVNFMSCTLEEPGRGSSS
GGGSGGSTGAGDPPWLSGGGARWSRSVLAPRRDEALAVSELLVFGHADGA
LTFYEGSGPAAWGDPRLAVSMGIEEEGPSTLVPMGAVPLGRWPGVSGEIL
GGGGDGKGNGGGGGGVTAVDVLVERDHDPRAALDACFVAAGLAGGAVAVL
RLGPDDGRGLPWEELLPPPPPLPPLSAYVRAGPGGAGRKASEAGSAAPDA
GPGGSGGNGGVSAGSNSGGGNGNGHGNAGRRQSVDELAAVIAAAQAEARA
IDGIGDGGDKAAGYDAEATAAVLDSVDCGDEDEAANAAGSGGGAAGAAGA
AACAESAFAAAAARAAAWAMPSPVRMVINAHNEAVCAVMLALLGDSGGDG
GGAAFALLAADVGGTVSVSRVDDVDPSTMILKT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR036322WD40_repeat_dom_sf