prot_P-wetherbeei_contig17666.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig17666.2.1
Unique Nameprot_P-wetherbeei_contig17666.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length137
Homology
BLAST of mRNA_P-wetherbeei_contig17666.2.1 vs. uniprot
Match: A0A7C4TVJ3_9HYPH (50S ribosomal protein L11 n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4TVJ3_9HYPH)

HSP 1 Score: 219 bits (558), Expect = 2.440e-71
Identity = 105/134 (78.36%), Postives = 125/134 (93.28%), Query Frame = 0
Query:    1 VPAQKANPSPPIGPALGQRGVNIMEFCKSFNAKTKDIDADTPIPVKITVFSDRSFTFEMKTPPATFFIKKAAGLKTTGKPGAGSKEPGRVQAGVITMAQVKDIAKLKMKDLNATDIEAAAKIIAGSARSMGIKV 134
            VPA KANPSPPIGPALGQRGVNI EFCK+FNAKTKD++ +TPIPV+ITV+SDRSFTFEM+TPPAT+F+KKAAGLKT+GKPG+GSKEPGR  AG +TMAQV++IA++KMKDLN  D+EAAA+ IAGSARSMG++V
Sbjct:   13 VPAGKANPSPPIGPALGQRGVNINEFCKAFNAKTKDMEPETPIPVRITVYSDRSFTFEMRTPPATYFLKKAAGLKTSGKPGSGSKEPGRTSAGSVTMAQVREIARMKMKDLNTEDLEAAARTIAGSARSMGLEV 146          
BLAST of mRNA_P-wetherbeei_contig17666.2.1 vs. uniprot
Match: UPI00088560E8 (50S ribosomal protein L11 n=1 Tax=Filomicrobium insigne TaxID=418854 RepID=UPI00088560E8)

HSP 1 Score: 218 bits (556), Expect = 4.920e-71
Identity = 110/134 (82.09%), Postives = 120/134 (89.55%), Query Frame = 0
Query:    1 VPAQKANPSPPIGPALGQRGVNIMEFCKSFNAKTKDIDADTPIPVKITVFSDRSFTFEMKTPPATFFIKKAAGLKTTGKPGAGSKEPGRVQAGVITMAQVKDIAKLKMKDLNATDIEAAAKIIAGSARSMGIKV 134
            VPA KANPSPPIGPALGQRGVNIMEFCK+FNAKTKDI+ DTPIPVKITV+SDRSFTF MKTPPATFF+KKAAGLKTTGKPGAGSKEPGR   G +TM QV++IAK K+ DLN  DIE AA+ IAGSARSMGI+V
Sbjct:   13 VPAGKANPSPPIGPALGQRGVNIMEFCKAFNAKTKDIEPDTPIPVKITVYSDRSFTFIMKTPPATFFLKKAAGLKTTGKPGAGSKEPGRGTVGQVTMDQVREIAKTKLADLNTDDIEQAARSIAGSARSMGIRV 146          
BLAST of mRNA_P-wetherbeei_contig17666.2.1 vs. uniprot
Match: A0A258KW25_9HYPH (50S ribosomal protein L11 n=4 Tax=Hyphomicrobium TaxID=81 RepID=A0A258KW25_9HYPH)

HSP 1 Score: 216 bits (550), Expect = 4.040e-70
Identity = 107/134 (79.85%), Postives = 120/134 (89.55%), Query Frame = 0
Query:    1 VPAQKANPSPPIGPALGQRGVNIMEFCKSFNAKTKDIDADTPIPVKITVFSDRSFTFEMKTPPATFFIKKAAGLKTTGKPGAGSKEPGRVQAGVITMAQVKDIAKLKMKDLNATDIEAAAKIIAGSARSMGIKV 134
            VPA  ANP+PPIGPALGQRGVNIMEFCKSFNAKTKD++  TPIPVKITV+SDRSFTFEM+TPPATF IKKAAG+K TGKPG+GSK PGR  AG ITMAQ++DIAKLKMKD+N  D++ AAK IAGSARSMG+KV
Sbjct:   13 VPAGAANPAPPIGPALGQRGVNIMEFCKSFNAKTKDLEQGTPIPVKITVYSDRSFTFEMRTPPATFLIKKAAGMKPTGKPGSGSKNPGRDVAGEITMAQLRDIAKLKMKDMNTNDLDQAAKTIAGSARSMGLKV 146          
BLAST of mRNA_P-wetherbeei_contig17666.2.1 vs. uniprot
Match: A0A101W7C6_9PROT (50S ribosomal protein L11 n=1 Tax=Alphaproteobacteria bacterium BRH_c36 TaxID=1734406 RepID=A0A101W7C6_9PROT)

HSP 1 Score: 212 bits (540), Expect = 1.350e-68
Identity = 103/136 (75.74%), Postives = 120/136 (88.24%), Query Frame = 0
Query:    1 VPAQKANPSPPIGPALGQRGVNIMEFCKSFNAKTKDIDADTPIPVKITVFSDRSFTFEMKTPPATFFIKKAAGLKTTGKPGAGSKEPGRVQAGVITMAQVKDIAKLKMKDLNATDIEAAAKIIAGSARSMGIKVEG 136
            VPA KANPSPPIGPALGQRGVNIMEFCK+FNAK+KDI+ DTPIPVKITV+SDRSFTF+MKTPPATFF+KKAAGLK TGKPG+GSKEPGR     +TM Q ++IAK+K+ DLN  DIE  A+ IAGSA++MGI+V+G
Sbjct:   13 VPAGKANPSPPIGPALGQRGVNIMEFCKAFNAKSKDIEPDTPIPVKITVYSDRSFTFQMKTPPATFFLKKAAGLKATGKPGSGSKEPGRTVVASVTMDQCREIAKMKLADLNTDDIEQGARTIAGSAKAMGIEVKG 148          
BLAST of mRNA_P-wetherbeei_contig17666.2.1 vs. uniprot
Match: A0A109BN92_HYPSL (50S ribosomal protein L11 n=1 Tax=Hyphomicrobium sulfonivorans TaxID=121290 RepID=A0A109BN92_HYPSL)

HSP 1 Score: 211 bits (536), Expect = 5.480e-68
Identity = 105/135 (77.78%), Postives = 119/135 (88.15%), Query Frame = 0
Query:    1 VPAQKANPSPPIGPALGQRGVNIMEFCKSFNAKTKDIDADTPIPVKITVFSDRSFTFEMKTPPATFFIKKAAGLKTTGKPGAGSKEPGRVQAGVITMAQVKDIAKLKMKDLNATDIEAAAKIIAGSARSMGIKVE 135
            VPA  ANPSPPIGPALGQRGVNIMEFCKSFNAKTKD++  TPIPVKITV+SDRSFTF MKTPPATF IKKA G+K TGKPG+GSK PGR  AG ITM Q+++IAK+K+KD+N  DIEAAAK IAGSARSMG++V+
Sbjct:   13 VPAGAANPSPPIGPALGQRGVNIMEFCKSFNAKTKDLEQGTPIPVKITVYSDRSFTFVMKTPPATFLIKKAVGMKATGKPGSGSKNPGRDVAGSITMDQLREIAKVKLKDMNTDDIEAAAKTIAGSARSMGLQVK 147          
BLAST of mRNA_P-wetherbeei_contig17666.2.1 vs. uniprot
Match: UPI000931F9C5 (50S ribosomal protein L11 n=1 Tax=Hyphomicrobium sp. CS1GBMeth3 TaxID=1892845 RepID=UPI000931F9C5)

HSP 1 Score: 208 bits (530), Expect = 4.500e-67
Identity = 103/134 (76.87%), Postives = 119/134 (88.81%), Query Frame = 0
Query:    1 VPAQKANPSPPIGPALGQRGVNIMEFCKSFNAKTKDIDADTPIPVKITVFSDRSFTFEMKTPPATFFIKKAAGLKTTGKPGAGSKEPGRVQAGVITMAQVKDIAKLKMKDLNATDIEAAAKIIAGSARSMGIKV 134
            VPA  ANPSPPIGPALGQRGVNIMEFCKSFNAKTKD++  TPIPVKITV+SDRSFTFEM+TPPAT+ IKKAAG+K TGKPG+GSK PGR  AG IT+AQ+++IAKLKMKD+N  ++E A K IAGSARSMG++V
Sbjct:   13 VPAGAANPSPPIGPALGQRGVNIMEFCKSFNAKTKDLEQGTPIPVKITVYSDRSFTFEMRTPPATYLIKKAAGMKPTGKPGSGSKAPGRDVAGQITIAQLQEIAKLKMKDMNTDNLEQATKTIAGSARSMGLRV 146          
BLAST of mRNA_P-wetherbeei_contig17666.2.1 vs. uniprot
Match: N0B7G8_9HYPH (50S ribosomal protein L11 n=11 Tax=Hyphomicrobium TaxID=81 RepID=N0B7G8_9HYPH)

HSP 1 Score: 204 bits (520), Expect = 1.500e-65
Identity = 101/134 (75.37%), Postives = 118/134 (88.06%), Query Frame = 0
Query:    1 VPAQKANPSPPIGPALGQRGVNIMEFCKSFNAKTKDIDADTPIPVKITVFSDRSFTFEMKTPPATFFIKKAAGLKTTGKPGAGSKEPGRVQAGVITMAQVKDIAKLKMKDLNATDIEAAAKIIAGSARSMGIKV 134
            VPA  ANPSPPIGPALGQRGVNIMEFCK+FNAKTKD++  TPIPVKITV+SDRSFTFEM+ PPAT+ IKKAAGL+ TGK G GSKEPGR  AG +T+AQ+K+IAK K+KD+N  DI+AAA+ +AGSARSMG+KV
Sbjct:   13 VPAGAANPSPPIGPALGQRGVNIMEFCKAFNAKTKDLEQGTPIPVKITVYSDRSFTFEMRQPPATYLIKKAAGLRPTGKGGTGSKEPGRSVAGQVTIAQLKEIAKGKLKDMNTDDIDAAARTLAGSARSMGLKV 146          
BLAST of mRNA_P-wetherbeei_contig17666.2.1 vs. uniprot
Match: A0A6I0EM31_HYPSQ (50S ribosomal protein L11 n=2 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A6I0EM31_HYPSQ)

HSP 1 Score: 201 bits (510), Expect = 4.110e-64
Identity = 103/135 (76.30%), Postives = 117/135 (86.67%), Query Frame = 0
Query:    1 VPAQKANPSPPIGPALGQRGVNIMEFCKSFNAKTKDIDADTPIPVKITVFSDRSFTFEMKTPPATFFIKKAAGLKTTGKPGAGSKEPGRVQAGVITMAQVKDIAKLKMKDLNATDIEAAAKIIAGSARSMGIKVE 135
            VPA  ANPSPPIGPALGQRGVNIMEFCKSFNAKTKD++  TPIPVKITVFSDRSFTFEM+TPPA+FF+KKAA + +      GSK+PGR  AG +TMAQV+DIAKLKMKDLN  D+EAAAK IAGSARSMG++V+
Sbjct:   13 VPAGAANPSPPIGPALGQRGVNIMEFCKSFNAKTKDMEQGTPIPVKITVFSDRSFTFEMRTPPASFFLKKAAKITS------GSKDPGRGVAGSVTMAQVRDIAKLKMKDLNTDDVEAAAKTIAGSARSMGLQVK 141          
BLAST of mRNA_P-wetherbeei_contig17666.2.1 vs. uniprot
Match: A0A1E4CVU0_9HYPH (50S ribosomal protein L11 n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1E4CVU0_9HYPH)

HSP 1 Score: 198 bits (504), Expect = 3.370e-63
Identity = 103/134 (76.87%), Postives = 116/134 (86.57%), Query Frame = 0
Query:    1 VPAQKANPSPPIGPALGQRGVNIMEFCKSFNAKTKDIDADTPIPVKITVFSDRSFTFEMKTPPATFFIKKAAGLKTTGKPGAGSKEPGRVQAGVITMAQVKDIAKLKMKDLNATDIEAAAKIIAGSARSMGIKV 134
            V A +ANP+PPIGPALGQRGVNIMEFCKSFNAKTKD++   PIPVKITVFSDRSFTFEMKTPPA+ F+KKAAG+++      GSKE GR  AG +TMAQV+DIAKLKMKDLN  DIEAAA+IIAGSARSMGI+V
Sbjct:   13 VKAGQANPAPPIGPALGQRGVNIMEFCKSFNAKTKDMEQGIPIPVKITVFSDRSFTFEMKTPPASHFLKKAAGIES------GSKETGRAVAGSVTMAQVRDIAKLKMKDLNTDDIEAAARIIAGSARSMGIRV 140          
BLAST of mRNA_P-wetherbeei_contig17666.2.1 vs. uniprot
Match: A0A2P5KR46_HYPSQ (50S ribosomal protein L11 n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A2P5KR46_HYPSQ)

HSP 1 Score: 194 bits (494), Expect = 1.130e-61
Identity = 99/134 (73.88%), Postives = 115/134 (85.82%), Query Frame = 0
Query:    1 VPAQKANPSPPIGPALGQRGVNIMEFCKSFNAKTKDIDADTPIPVKITVFSDRSFTFEMKTPPATFFIKKAAGLKTTGKPGAGSKEPGRVQAGVITMAQVKDIAKLKMKDLNATDIEAAAKIIAGSARSMGIKV 134
            VPA KANPSPPIGPALGQRGVNIMEFCK+FNAKTKD++  TPIPVKITV+SDRSFTFEM+TPPA+FF+KKAA +++      GSK PGR  AG +TMAQV++IAK K+KDLN  DIE AA+ IAGSARSMG+KV
Sbjct:   13 VPAGKANPSPPIGPALGQRGVNIMEFCKAFNAKTKDMEQGTPIPVKITVYSDRSFTFEMRTPPASFFLKKAAAVES------GSKTPGRDVAGQVTMAQVREIAKTKLKDLNTDDIEQAARTIAGSARSMGLKV 140          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig17666.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C4TVJ3_9HYPH2.440e-7178.3650S ribosomal protein L11 n=1 Tax=Hyphomicrobiales... [more]
UPI00088560E84.920e-7182.0950S ribosomal protein L11 n=1 Tax=Filomicrobium in... [more]
A0A258KW25_9HYPH4.040e-7079.8550S ribosomal protein L11 n=4 Tax=Hyphomicrobium T... [more]
A0A101W7C6_9PROT1.350e-6875.7450S ribosomal protein L11 n=1 Tax=Alphaproteobacte... [more]
A0A109BN92_HYPSL5.480e-6877.7850S ribosomal protein L11 n=1 Tax=Hyphomicrobium s... [more]
UPI000931F9C54.500e-6776.8750S ribosomal protein L11 n=1 Tax=Hyphomicrobium s... [more]
N0B7G8_9HYPH1.500e-6575.3750S ribosomal protein L11 n=11 Tax=Hyphomicrobium ... [more]
A0A6I0EM31_HYPSQ4.110e-6476.3050S ribosomal protein L11 n=2 Tax=Hyphomicrobium s... [more]
A0A1E4CVU0_9HYPH3.370e-6376.8750S ribosomal protein L11 n=3 Tax=Alphaproteobacte... [more]
A0A2P5KR46_HYPSQ1.130e-6173.8850S ribosomal protein L11 n=1 Tax=Hyphomicrobium s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000911Ribosomal protein L11/L12SMARTSM00649rl11ccoord: 1..135
e-value: 7.0E-71
score: 251.5
IPR000911Ribosomal protein L11/L12PANTHERPTHR1166160S RIBOSOMAL PROTEIN L12coord: 1..134
IPR000911Ribosomal protein L11/L12HAMAPMF_00736Ribosomal_L11coord: 1..136
score: 24.933441
IPR000911Ribosomal protein L11/L12CDDcd00349Ribosomal_L11coord: 1..134
e-value: 1.11839E-63
score: 188.429
IPR036796Ribosomal protein L11/L12, N-terminal domain superfamilyGENE3D3.30.1550.10coord: 1..57
e-value: 5.0E-31
score: 108.2
IPR036796Ribosomal protein L11/L12, N-terminal domain superfamilySUPERFAMILY54747Ribosomal L11/L12e N-terminal domaincoord: 1..61
IPR036769Ribosomal protein L11, C-terminal domain superfamilyGENE3D1.10.10.250coord: 58..136
e-value: 4.3E-30
score: 105.7
IPR036769Ribosomal protein L11, C-terminal domain superfamilySUPERFAMILY46906Ribosomal protein L11, C-terminal domaincoord: 56..135
IPR006519Ribosomal protein L11, bacterial-typeTIGRFAMTIGR01632TIGR01632coord: 1..135
e-value: 1.4E-56
score: 188.3
IPR020784Ribosomal protein L11, N-terminalPFAMPF03946Ribosomal_L11_Ncoord: 1..55
e-value: 5.9E-27
score: 93.3
IPR020783Ribosomal protein L11, C-terminalPFAMPF00298Ribosomal_L11coord: 60..134
e-value: 3.3E-24
score: 85.2
NoneNo IPR availablePANTHERPTHR11661:SF139S RIBOSOMAL PROTEIN L11, MITOCHONDRIALcoord: 1..134
IPR020785Ribosomal protein L11, conserved sitePROSITEPS00359RIBOSOMAL_L11coord: 121..136

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig17666contigP-wetherbeei_contig17666:1002..1412 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig17666.2.1mRNA_P-wetherbeei_contig17666.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig17666 1002..1412 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig17666.2.1 ID=prot_P-wetherbeei_contig17666.2.1|Name=mRNA_P-wetherbeei_contig17666.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=137bp
VPAQKANPSPPIGPALGQRGVNIMEFCKSFNAKTKDIDADTPIPVKITVF
SDRSFTFEMKTPPATFFIKKAAGLKTTGKPGAGSKEPGRVQAGVITMAQV
KDIAKLKMKDLNATDIEAAAKIIAGSARSMGIKVEG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000911Ribosomal_L11/L12
IPR036796Ribosomal_L11/L12_N_sf
IPR036769Ribosomal_L11_C_sf
IPR006519Ribosomal_L11_bac-typ
IPR020784Ribosomal_L11_N
IPR020783Ribosomal_L11_C
IPR020785Ribosomal_L11_CS