prot_P-wetherbeei_contig15956.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig15956.1.1
Unique Nameprot_P-wetherbeei_contig15956.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length236
Homology
BLAST of mRNA_P-wetherbeei_contig15956.1.1 vs. uniprot
Match: A0A537NBS8_9PROT (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537NBS8_9PROT)

HSP 1 Score: 309 bits (792), Expect = 1.180e-101
Identity = 174/241 (72.20%), Postives = 192/241 (79.67%), Query Frame = 0
Query:    1 PPWHGPQ-ERGDEPAGRARRFGGDRTNILIREMWRICQCGTLAWSTREAMLRETMIRRLSRRATLGAAAVLPAA-LLPWGLGAQSP---WKPSQAVKIVVPAAPGGTTDIVARLLAAHLQQAWGQSCVVDNKSGAGGVIGSAEVVKSAPDGSTILMGNIGPQSIAYSLYRNMPYTQASLIPVSCVLTAPNVLVLHPSVPAKTVPEFVAWLKAQNGKASYASSGTGQSPHLSAAWFLQLTGT 236
            PPWHG +  +G   AGRA          LIR++W+ICQCGT A  +R ++  ET+ RRL+RRA+L  AAVLP+  LL  GL AQS    WKPSQ V+IVVPAAPGGTTDIVARLLAAHLQ AWGQSCVVDNKSGAGGVIGS EV K+  DG T LMGNIGPQSIAYSLYRNMPY   SLI VS V+TAPNVL++HPSVPAKTVPEFVAWL+AQNG ASYASSGTGQSPHLS AWFLQLTGT
Sbjct:   17 PPWHGARCGKGKSGAGRAAN--------LIRQLWQICQCGTGAARSRRSV-EETVTRRLTRRASLAGAAVLPSVVLLSRGLRAQSGSSGWKPSQGVRIVVPAAPGGTTDIVARLLAAHLQAAWGQSCVVDNKSGAGGVIGSTEVAKATADGHTALMGNIGPQSIAYSLYRNMPYRPDSLIGVSKVITAPNVLLVHPSVPAKTVPEFVAWLRAQNGTASYASSGTGQSPHLSGAWFLQLTGT 248          
BLAST of mRNA_P-wetherbeei_contig15956.1.1 vs. uniprot
Match: A0A521MEZ7_9HYPH (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521MEZ7_9HYPH)

HSP 1 Score: 304 bits (779), Expect = 1.850e-100
Identity = 166/192 (86.46%), Postives = 171/192 (89.06%), Query Frame = 0
Query:   54 MIRRLSRRATL----GAAAVLPAA-LLPWGLGAQS----PWKPSQAVKIVVPAAPGGTTDIVARLLAAHLQQAWGQSCVVDNKSGAGGVIGSAEVVKSAPDGSTILMGNIGPQSIAYSLYRNMPYTQASLIPVSCVLTAPNVLVLHPSVPAKTVPEFVAWLKAQNGKASYASSGTGQSPHLSAAWFLQLTGT 236
            MIRRLSRR  +    GAAA LPAA LLP  LGAQS    PWKP+Q VKIVVPAAPGGTTDIVARLLAAHLQQAWGQ+CVV+NKSGAGGVIGS EVVKSAPDG TILMGNIGPQSI YSLYRNMPYT ASLIPVSCVLTAPNVLV+HPSVPAKTVPEFVAWLKAQNGK SYASSGTGQSPHLS AWFLQLTGT
Sbjct:    1 MIRRLSRRTAVRLATGAAAALPAAALLPRTLGAQSSGSSPWKPTQGVKIVVPAAPGGTTDIVARLLAAHLQQAWGQTCVVENKSGAGGVIGSNEVVKSAPDGHTILMGNIGPQSIGYSLYRNMPYTPASLIPVSCVLTAPNVLVVHPSVPAKTVPEFVAWLKAQNGKVSYASSGTGQSPHLSGAWFLQLTGT 192          
BLAST of mRNA_P-wetherbeei_contig15956.1.1 vs. uniprot
Match: A0A1E4HTN7_9PROT (C4-dicarboxylate ABC transporter n=4 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1E4HTN7_9PROT)

HSP 1 Score: 291 bits (744), Expect = 2.890e-95
Identity = 152/184 (82.61%), Postives = 166/184 (90.22%), Query Frame = 0
Query:   54 MIRRLSRRATLGAAAVLPAA-LLPWGLGAQSPWKPSQAVKIVVPAAPGGTTDIVARLLAAHLQQAWGQSCVVDNKSGAGGVIGSAEVVKSAPDGSTILMGNIGPQSIAYSLYRNMPYTQASLIPVSCVLTAPNVLVLHPSVPAKTVPEFVAWLKAQNGKASYASSGTGQSPHLSAAWFLQLTGT 236
            M RRL+RRA L AA+ LPAA LLP    AQ+ W P+Q+V++VVPAAPGG TDI+ RLLA+HLQ+AWGQSCVVDNKSGAGGVIGS EVVKS PDG+TILMGNIGPQ+IAYSLYRNMPYT ASLIPVS  +TAPNVLVLHPSVPAKT+PEFVAWLKAQNGKASYASSGTGQSPHLSAAWFLQLTGT
Sbjct:    1 MTRRLTRRAALVAASALPAAALLPTSSRAQAAWTPTQSVRVVVPAAPGGGTDIMGRLLASHLQEAWGQSCVVDNKSGAGGVIGSTEVVKSKPDGTTILMGNIGPQAIAYSLYRNMPYTPASLIPVSNAITAPNVLVLHPSVPAKTIPEFVAWLKAQNGKASYASSGTGQSPHLSAAWFLQLTGT 184          
BLAST of mRNA_P-wetherbeei_contig15956.1.1 vs. uniprot
Match: A0A259MMB8_9PROT (C4-dicarboxylate ABC transporter n=5 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A259MMB8_9PROT)

HSP 1 Score: 287 bits (735), Expect = 6.680e-94
Identity = 152/184 (82.61%), Postives = 162/184 (88.04%), Query Frame = 0
Query:   54 MIRRLSRRATLGAAAVLPAA-LLPWGLGAQSPWKPSQAVKIVVPAAPGGTTDIVARLLAAHLQQAWGQSCVVDNKSGAGGVIGSAEVVKSAPDGSTILMGNIGPQSIAYSLYRNMPYTQASLIPVSCVLTAPNVLVLHPSVPAKTVPEFVAWLKAQNGKASYASSGTGQSPHLSAAWFLQLTGT 236
            M R LSRRA LGAAA      LLP GL AQ+ WKP+Q V++VVPAAPGGTTDI ARLLA+HL +AWGQSCVVDNKSGAGGVIGS EV K+APDG+TILMGNIGPQSIAYSLYRNMPYT ASLIPVS  +TAPNVLV+HPSVPAKTVPEFVAWLKAQNGKASYASSGTGQSPHL  AWFLQLTGT
Sbjct:    1 MTRSLSRRAALGAAAXXXXXXLLPRGLQAQAAWKPTQNVRMVVPAAPGGTTDIAARLLASHLTEAWGQSCVVDNKSGAGGVIGSTEVAKAAPDGNTILMGNIGPQSIAYSLYRNMPYTPASLIPVSNAITAPNVLVVHPSVPAKTVPEFVAWLKAQNGKASYASSGTGQSPHLCGAWFLQLTGT 184          
BLAST of mRNA_P-wetherbeei_contig15956.1.1 vs. uniprot
Match: A0A1H8UEQ4_9PROT (Tripartite-type tricarboxylate transporter, receptor component TctC n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1H8UEQ4_9PROT)

HSP 1 Score: 284 bits (727), Expect = 1.090e-92
Identity = 149/180 (82.78%), Postives = 157/180 (87.22%), Query Frame = 0
Query:   58 LSRRATLGAAAVLPAA-LLPWGLGAQSPWKPSQAVKIVVPAAPGGTTDIVARLLAAHLQQAWGQSCVVDNKSGAGGVIGSAEVVKSAPDGSTILMGNIGPQSIAYSLYRNMPYTQASLIPVSCVLTAPNVLVLHPSVPAKTVPEFVAWLKAQNGKASYASSGTGQSPHLSAAWFLQLTGT 236
            LSRRA L AA +LP A LLP    A   W+PSQ ++IVVPAAPGGTTDIVARLLAA LQQAWGQSCVVDNKSGAGGVIGS EVVK+ PDG+T LMGNIGPQSIAYSLYRNMPY   SL PVSCV+TAPNVLV+HPSVPAKTVPEFVAWLKAQNGK SYASSGTGQSPHLS AWFLQLTGT
Sbjct:    5 LSRRAALAAATILPVANLLPRTAAADGAWRPSQGIRIVVPAAPGGTTDIVARLLAAFLQQAWGQSCVVDNKSGAGGVIGSNEVVKATPDGTTALMGNIGPQSIAYSLYRNMPYGPKSLAPVSCVITAPNVLVVHPSVPAKTVPEFVAWLKAQNGKVSYASSGTGQSPHLSGAWFLQLTGT 184          
BLAST of mRNA_P-wetherbeei_contig15956.1.1 vs. uniprot
Match: A0A5C5TP40_9HYPH (Tripartite tricarboxylate transporter substrate binding protein n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A5C5TP40_9HYPH)

HSP 1 Score: 258 bits (660), Expect = 1.510e-82
Identity = 136/183 (74.32%), Postives = 153/183 (83.61%), Query Frame = 0
Query:   53 TMIRRLSRRATLGAAAVLPAALLPWGLGAQSPWKPSQAVKIVVPAAPGGTTDIVARLLAAHLQQAWGQSCVVDNKSGAGGVIGSAEVVKSAPDGSTILMGNIGPQSIAYSLYRNMPYTQASLIPVSCVLTAPNVLVLHPSVPAKTVPEFVAWLKAQNGKASYASSGTGQSPHLSAAWFLQLTG 235
            T   RLSRR  +  AA LPA   P  + A + W+P QAV+IVVPAAPGGTTDIVARLLA+HLQQ WGQS VVDNKSGAGGV+GS EVV++APDG T+LMGNIGPQSIAYSLYRN+PY   SLIPVS V+TAPNVLV+HP+VPAKTVPEFV WL+ +NG+ASYASSGTGQSPHLS A FLQL G
Sbjct:    2 TRFTRLSRRTVMAGAAALPALAAPAVVRADA-WRPKQAVRIVVPAAPGGTTDIVARLLASHLQQRWGQSVVVDNKSGAGGVVGSTEVVRAAPDGLTMLMGNIGPQSIAYSLYRNLPYKPESLIPVSNVITAPNVLVVHPAVPAKTVPEFVTWLRGRNGEASYASSGTGQSPHLSGALFLQLVG 183          
BLAST of mRNA_P-wetherbeei_contig15956.1.1 vs. uniprot
Match: UPI00200B0861 (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Roseomonas sp. NAR14 TaxID=2937791 RepID=UPI00200B0861)

HSP 1 Score: 225 bits (574), Expect = 1.410e-69
Identity = 115/182 (63.19%), Postives = 136/182 (74.73%), Query Frame = 0
Query:   54 MIRRLSRRATLGAAAVLPAALLPWGLGAQSPWKPSQAVKIVVPAAPGGTTDIVARLLAAHLQQAWGQSCVVDNKSGAGGVIGSAEVVKSAPDGSTILMGNIGPQSIAYSLYRNMPYTQASLIPVSCVLTAPNVLVLHPSVPAKTVPEFVAWLKAQNGKASYASSGTGQSPHLSAAWFLQLTG 235
            M+  LSRRA L         LL        PW+PSQ V+IVVPAA GGTTDI+ RLLAAHLQ  WG   V +N++GAGG+IG+ EVV+S PDG T+L GNIGPQ+IAYSL+RN+PY    L+PVS ++  PNVLV+HPS+PA+TVPEFVAWL+A NGKASY S G GQSPHLSA WFLQL G
Sbjct:    1 MVTPLSRRAALALPLAASLPLLAPRAARAEPWRPSQQVRIVVPAAAGGTTDIMGRLLAAHLQTRWGLPAVAENRTGAGGIIGTQEVVRSKPDGLTLLSGNIGPQAIAYSLFRNLPYRPEDLLPVSNLIRGPNVLVIHPSIPAQTVPEFVAWLRANNGKASYGSPGVGQSPHLSAVWFLQLIG 182          
BLAST of mRNA_P-wetherbeei_contig15956.1.1 vs. uniprot
Match: UPI001C2C8D76 (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Siccirubricoccus sp. G192 TaxID=2849651 RepID=UPI001C2C8D76)

HSP 1 Score: 215 bits (548), Expect = 9.530e-66
Identity = 113/179 (63.13%), Postives = 136/179 (75.98%), Query Frame = 0
Query:   58 LSRRATLGAAAVLPAALLPWGLGAQSPWKPSQAVKIVVPAAPGGTTDIVARLLAAHLQQAWGQSCVVDNKSGAGGVIGSAEVVKSAPDGSTILMGNIGPQSIAYSLYRNMPYTQASLIPVSCVLTAPNVLVLHPSVPAKTVPEFVAWLKAQNGKASYASSGTGQSPHLSAAWFLQLTGT 236
            +SRR  +G  A   AA +     AQS W+PS+ VKI+VPAAPGGTTDI+ RLLA +LQ +WGQ+ VV+NKSGAGG IG+ EVV++ PDG T+LMGNIGPQSIAYSL+RN+PY    L+PVS ++  PNVLVLHPSVPA +VPEFV +LK   GK SY + G GQSPHLS  WF QLT T
Sbjct:    1 MSRRTIIGILAAAQAARI---ARAQSRWRPSETVKIIVPAAPGGTTDIMGRLLANYLQSSWGQNAVVENKSGAGGTIGTMEVVRARPDGHTMLMGNIGPQSIAYSLFRNLPYGPGDLVPVSNMIRGPNVLVLHPSVPAGSVPEFVRYLKQNPGKLSYGTPGIGQSPHLSGVWFHQLTET 176          
BLAST of mRNA_P-wetherbeei_contig15956.1.1 vs. uniprot
Match: UPI001CA5E978 (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Roseomonas sp. HJA6 TaxID=2846776 RepID=UPI001CA5E978)

HSP 1 Score: 215 bits (548), Expect = 9.530e-66
Identity = 111/180 (61.67%), Postives = 137/180 (76.11%), Query Frame = 0
Query:   57 RLSRRATLGAAAVLPAALLPWGLGAQSPWKPSQAVKIVVPAAPGGTTDIVARLLAAHLQQAWGQSCVVDNKSGAGGVIGSAEVVKSAPDGSTILMGNIGPQSIAYSLYRNMPYTQASLIPVSCVLTAPNVLVLHPSVPAKTVPEFVAWLKAQNGKASYASSGTGQSPHLSAAWFLQLTGT 236
            RLSRRA L   A+LP A +         W+P Q V+I+VPAAPGGTTDI+ARLL  +LQ  WG   VVDN+SGAGG IG+ E V++ PDG T+LMGNIGPQ+IAYSL+RN+ Y   SL+ V+ V+  PNVLV++PSVPA+TVPEFVAWLK ++G+A+Y +SG GQSPHLSA WF QLT T
Sbjct:    3 RLSRRAALSLPALLPTAAI------AETWRPGQPVRIIVPAAPGGTTDIMARLLGQYLQSRWGTPVVVDNRSGAGGTIGTMEAVRATPDGRTMLMGNIGPQAIAYSLFRNLQYRPDSLVAVANVIRGPNVLVVNPSVPAQTVPEFVAWLKREDGRAAYGTSGLGQSPHLSAVWFTQLTET 176          
BLAST of mRNA_P-wetherbeei_contig15956.1.1 vs. uniprot
Match: UPI001057C0FF (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Paracraurococcus ruber TaxID=77675 RepID=UPI001057C0FF)

HSP 1 Score: 213 bits (542), Expect = 7.860e-65
Identity = 113/180 (62.78%), Postives = 137/180 (76.11%), Query Frame = 0
Query:   57 RLSRRATLGAAAVLPAALLPWGLGAQSPWKPSQAVKIVVPAAPGGTTDIVARLLAAHLQQAWGQSCVVDNKSGAGGVIGSAEVVKSAPDGSTILMGNIGPQSIAYSLYRNMPYTQASLIPVSCVLTAPNVLVLHPSVPAKTVPEFVAWLKAQNGKASYASSGTGQSPHLSAAWFLQLTGT 236
            RL+RRA L    VLP A  P+   AQ  W+P+QA++I+VPAAPGGT DI ARLLA  LQQ +GQ+CVV+N+SGAGGVIG+AEVV++ PDG T+L+GNIGPQ+I  SL+RN+PY Q  L+PV   +  PNVLV+HPSVPA +VPE VA LKA  GK SY S G GQSPHL+  WF Q TGT
Sbjct:    3 RLTRRAAL----VLPLAA-PFAARAQGGWRPTQAIRIIVPAAPGGTADISARLLAPFLQQHYGQNCVVENRSGAGGVIGTAEVVRATPDGHTLLLGNIGPQAIGLSLFRNLPYRQQDLLPVCGTVRGPNVLVVHPSVPANSVPELVAHLKANPGKLSYGSPGVGQSPHLTGVWFNQATGT 177          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15956.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A537NBS8_9PROT1.180e-10172.20Tripartite tricarboxylate transporter substrate bi... [more]
A0A521MEZ7_9HYPH1.850e-10086.46Tripartite tricarboxylate transporter substrate bi... [more]
A0A1E4HTN7_9PROT2.890e-9582.61C4-dicarboxylate ABC transporter n=4 Tax=Alphaprot... [more]
A0A259MMB8_9PROT6.680e-9482.61C4-dicarboxylate ABC transporter n=5 Tax=Alphaprot... [more]
A0A1H8UEQ4_9PROT1.090e-9282.78Tripartite-type tricarboxylate transporter, recept... [more]
A0A5C5TP40_9HYPH1.510e-8274.32Tripartite tricarboxylate transporter substrate bi... [more]
UPI00200B08611.410e-6963.19tripartite tricarboxylate transporter substrate bi... [more]
UPI001C2C8D769.530e-6663.13tripartite tricarboxylate transporter substrate bi... [more]
UPI001CA5E9789.530e-6661.67tripartite tricarboxylate transporter substrate bi... [more]
UPI001057C0FF7.860e-6562.78tripartite tricarboxylate transporter substrate bi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005064Bordetella uptake genePFAMPF03401TctCcoord: 106..231
e-value: 3.9E-31
score: 108.1
IPR005064Bordetella uptake genePANTHERPTHR42928TRICARBOXYLATE-BINDING PROTEINcoord: 57..235
IPR042100Bordetella uptake gene, domain 1GENE3D3.40.190.150Bordetella uptake gene, domain 1coord: 87..183
e-value: 2.7E-50
score: 173.1
NoneNo IPR availableGENE3D3.40.190.10coord: 184..235
e-value: 2.7E-50
score: 173.1
NoneNo IPR availablePANTHERPTHR42928:SF5BLR1237 PROTEINcoord: 57..235
NoneNo IPR availableCDDcd07012PBP2_Bug_TTTcoord: 87..236
e-value: 3.53772E-63
score: 196.921

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15956contigP-wetherbeei_contig15956:1..734 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15956.1.1mRNA_P-wetherbeei_contig15956.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig15956 1..734 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig15956.1.1 ID=prot_P-wetherbeei_contig15956.1.1|Name=mRNA_P-wetherbeei_contig15956.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=236bp
PPWHGPQERGDEPAGRARRFGGDRTNILIREMWRICQCGTLAWSTREAML
RETMIRRLSRRATLGAAAVLPAALLPWGLGAQSPWKPSQAVKIVVPAAPG
GTTDIVARLLAAHLQQAWGQSCVVDNKSGAGGVIGSAEVVKSAPDGSTIL
MGNIGPQSIAYSLYRNMPYTQASLIPVSCVLTAPNVLVLHPSVPAKTVPE
FVAWLKAQNGKASYASSGTGQSPHLSAAWFLQLTGT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005064BUG
IPR042100Bug_dom1