prot_P-wetherbeei_contig15851.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig15851.1.1
Unique Nameprot_P-wetherbeei_contig15851.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length270
Homology
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BLAST of mRNA_P-wetherbeei_contig15851.1.1 vs. uniprot
Match: UPI001E676B15 (26S proteasome non-ATPase regulatory subunit 5-like n=1 Tax=Procambarus clarkii TaxID=6728 RepID=UPI001E676B15)

HSP 1 Score: 58.9 bits (141), Expect = 2.870e-6
Identity = 32/99 (32.32%), Postives = 58/99 (58.59%), Query Frame = 0 
Query:  161 EYLLALARRPVPEVRFGAFDVMRCALHQRGGWGLRALFLQTAGYPEFLENRQTEHERPGREWKFSVIEAAVRCPE-KAVIGAATLERLETMLRQGPFYV 258
            E L+A+AR+P  ++   A  ++    +    WG R +  +  G  E++ +R+TE E+PG+E K++++E  V+ P   ++     +E+LE   RQGPF+V
Sbjct:  404 EKLVAIARQPFTDIHCPALGLINALANMP--WGQRFI-CREPGLIEYILDRKTESEKPGKEAKWTIVETLVKSPSASSIFTEYHMEQLEKFYRQGPFFV 499
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15851.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI001E676B152.870e-632.3226S proteasome non-ATPase regulatory subunit 5-lik... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR01953826S proteasome non-ATPase regulatory subunit 5PFAMPF10508Proteasom_PSMBcoord: 156..259
e-value: 3.1E-10
score: 39.1
IPR01953826S proteasome non-ATPase regulatory subunit 5PANTHERPTHR1355426S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 5-RELATEDcoord: 14..268

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15851contigP-wetherbeei_contig15851:14..1134 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15851.1.1mRNA_P-wetherbeei_contig15851.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig15851 14..1134 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig15851.1.1 ID=prot_P-wetherbeei_contig15851.1.1|Name=mRNA_P-wetherbeei_contig15851.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=270bp
GGGGSGGDLLQGSALRVLGAIYKRAGALPASAWAEVEPGLARAFLRLVVA
HAGSREETTQLAALSAIAAFAGSSVSALAAAVGDDELLDAWLTFDNFKVE
VKAAALHSIALAAGGGIEGGDGAGDGAEDMAGVCSLLLTAPLFHPKSLQV
GPRNGGRPTSEYLLALARRPVPEVRFGAFDVMRCALHQRGGWGLRALFLQ
TAGYPEFLENRQTEHERPGREWKFSVIEAAVRCPEKAVIGAATLERLETM
LRQGPFYVGQPPPDVRTMA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019538PSMD5