prot_P-wetherbeei_contig15831.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig15831.1.1
Unique Nameprot_P-wetherbeei_contig15831.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length303
Homology
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BLAST of mRNA_P-wetherbeei_contig15831.1.1 vs. uniprot
Match: A0A6H5JUH3_9PHAE (Conserved oligomeric Golgi complex subunit 4 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUH3_9PHAE)

HSP 1 Score: 196 bits (497), Expect = 3.540e-53
Identity = 150/340 (44.12%), Postives = 189/340 (55.59%), Query Frame = 0 
Query:    1 MLEVCVRKAGDALLDEVRRQCQ---RP---RGDTDAEAEGEAEQALAE-----ACHMAALLGKARQAANIYGGHLRARLRIEMESAMKRLASQRALHRLNMAAGGAGLAKXXXXXXXXXXXED-------SDAQPHVTALAAVLGAASKCMAKLARAGLDPDATAAPAALLHGDCLAQAAKVLDWFDNDSTLSRWQEQAS---AIAHGGKLEDIDGDGVGGAGEGKSGV----------------DVQGMDFIVDELAFISQLCQRYLDFSSEDMGVQTDSGSDFLARSQRLEGVYVQLEDAYCLASVAEAVRIAEPIEVADGICVSSMVEDGGFLLQVS 303
            ML+ C RKAG+  LD +R+ CQ   RP   R D      G+   AL E       + AALLGKA  AANIYGG LR RL+   ++A+K+L+S R L+RL++A+G      XXXXXXXXXXX         +D  PH+TALA VLG  SK M +LA + L        A LLH D   QA K+L+WF +D+ L +WQ Q S   A+                                        D +GMDF++DE+A   Q C RYLDF ++D+G+  D  S+F A+ +  EG YVQLEDAYCL SV EA+RIAEPIEV DG  VSSMVED  FL+  S
Sbjct:  113 MLQDCRRKAGEVTLDRLRKLCQKLSRPDANRHDDGGRMGGDGGTALGEEETVVVSYHAALLGKAEGAANIYGGFLRNRLKQANDAAVKKLSSLRPLYRLSLASGXXXXXXXXXXXXXXXXXXXXXXXXXXADPHPHITALATVLGEGSKLMVRLAESSLGDGVMEPVAELLHKDSKTQAVKILEWFQHDADLPKWQAQVSGRTAVERAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGLFDARGMDFVIDEMALACQYCHRYLDFVADDLGLPEDQSSEFYAQVRLTEGAYVQLEDAYCLRSVEEAMRIAEPIEVQDGTYVSSMVEDASFLVHKS 452
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BLAST of mRNA_P-wetherbeei_contig15831.1.1 vs. uniprot
Match: D8LT95_ECTSI (Conserved oligomeric Golgi complex subunit 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT95_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 3.850e-20
Identity = 50/84 (59.52%), Postives = 61/84 (72.62%), Query Frame = 0 
Query:  220 LAFISQLCQRYLDFSSEDMGVQTDSGSDFLARSQRLEGVYVQLEDAYCLASVAEAVRIAEPIEVADGICVSSMVEDGGFLLQVS 303
            +A   Q C RYLDF ++D+G+  D  S+F A+ + +EG YVQLEDAYCL SV EA+RIAEPIEV DG  VSSMVED  FL+  S
Sbjct:    1 MALACQYCHRYLDFVADDLGLPEDQSSEFYAQVRLIEGAYVQLEDAYCLRSVEEAMRIAEPIEVQDGTYVSSMVEDASFLVHKS 84
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15831.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JUH3_9PHAE3.540e-5344.12Conserved oligomeric Golgi complex subunit 4 n=1 T... [more]
D8LT95_ECTSI3.850e-2059.52Conserved oligomeric Golgi complex subunit 4 n=1 T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15831contigP-wetherbeei_contig15831:404..1567 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15831.1.1mRNA_P-wetherbeei_contig15831.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig15831 392..1567 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig15831.1.1 ID=prot_P-wetherbeei_contig15831.1.1|Name=mRNA_P-wetherbeei_contig15831.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=303bp
MLEVCVRKAGDALLDEVRRQCQRPRGDTDAEAEGEAEQALAEACHMAALL
GKARQAANIYGGHLRARLRIEMESAMKRLASQRALHRLNMAAGGAGLAKA
AAAAGRGGGGEDSDAQPHVTALAAVLGAASKCMAKLARAGLDPDATAAPA
ALLHGDCLAQAAKVLDWFDNDSTLSRWQEQASAIAHGGKLEDIDGDGVGG
AGEGKSGVDVQGMDFIVDELAFISQLCQRYLDFSSEDMGVQTDSGSDFLA
RSQRLEGVYVQLEDAYCLASVAEAVRIAEPIEVADGICVSSMVEDGGFLL
QVS
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