prot_P-wetherbeei_contig15685.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig15685.1.1
Unique Nameprot_P-wetherbeei_contig15685.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length75
Homology
BLAST of mRNA_P-wetherbeei_contig15685.1.1 vs. uniprot
Match: F0YGJ4_AURAN (RING-type domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGJ4_AURAN)

HSP 1 Score: 53.5 bits (127), Expect = 5.510e-8
Identity = 21/46 (45.65%), Postives = 28/46 (60.87%), Query Frame = 0
Query:   27 CVCCMGRPRSVVLLPCRHFECCQICGSSLVKCPTCNAIIADKMNMF 72
            CVCC+ RPR++VLL C H   C+ C   L +CP C A +A    +F
Sbjct:    5 CVCCLDRPRNMVLLDCMHVVACEACAPRLRECPMCRAPVAQTRRIF 50          
BLAST of mRNA_P-wetherbeei_contig15685.1.1 vs. uniprot
Match: D3BG62_POLPP (RING-type domain-containing protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BG62_POLPP)

HSP 1 Score: 49.3 bits (116), Expect = 1.480e-5
Identity = 16/35 (45.71%), Postives = 23/35 (65.71%), Query Frame = 0
Query:   27 CVCCMGRPRSVVLLPCRHFECCQICGSSLVKCPTC 61
            C+ C  R R+ +  PC H+ CC  C ++L+KCPTC
Sbjct:   91 CIVCQERSRNTLFSPCLHYNCCNTCANTLIKCPTC 125          
BLAST of mRNA_P-wetherbeei_contig15685.1.1 vs. uniprot
Match: UPI0006B10C4F (RING finger protein unkempt homolog isoform X1 n=2 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B10C4F)

HSP 1 Score: 50.4 bits (119), Expect = 2.140e-5
Identity = 21/53 (39.62%), Postives = 30/53 (56.60%), Query Frame = 0
Query:   19 VIERAAVDCVCCMGRPRSVVLLPCRHFECCQICGSSLVKCPTCNAIIADKMNM 71
            +  ++A  C+ C  + RSV LLPC H+  C  C    +KCP C A IA + +M
Sbjct:  770 IYHKSATKCMVCENQNRSVALLPCNHYVLCNQCALHQLKCPYCQADIAQRSSM 822          
BLAST of mRNA_P-wetherbeei_contig15685.1.1 vs. uniprot
Match: A0A139AJS3_GONPJ (RING-type domain-containing protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AJS3_GONPJ)

HSP 1 Score: 49.7 bits (117), Expect = 3.940e-5
Identity = 27/79 (34.18%), Postives = 38/79 (48.10%), Query Frame = 0
Query:    3 DANSVRQEPATPAR-------GEVIERA--AVDCVCCMGRPRSVVLLPCRHFECCQICGSSLVKCPTCNAIIADKMNMF 72
            D   VR +P   A        GE +E    A DCV C+ +  S++LL C H+  C+ C   L +CP C   IA ++  F
Sbjct:  469 DGGGVRGQPGGSAEVAQSAGEGEDLENVEEAEDCVVCLSKKPSIILLNCGHYCLCESCSGELDRCPVCRQPIARRIRTF 547          
BLAST of mRNA_P-wetherbeei_contig15685.1.1 vs. uniprot
Match: A0A7S3UWY5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWY5_HETAK)

HSP 1 Score: 47.8 bits (112), Expect = 5.050e-5
Identity = 20/46 (43.48%), Postives = 29/46 (63.04%), Query Frame = 0
Query:   27 CVCCMGRPRSVVLLPCRHFECCQICGS---SLVKCPTCNAIIADKM 69
            C  C+ +P++V+LLPC+H   C  CGS   +   CP CN+ I DK+
Sbjct:   76 CCVCLDKPKTVLLLPCKHLCLCADCGSPEKAFSLCPLCNSTIEDKL 121          
BLAST of mRNA_P-wetherbeei_contig15685.1.1 vs. uniprot
Match: A0A813G0G0_POLGL (RING-type E3 ubiquitin transferase (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813G0G0_POLGL)

HSP 1 Score: 48.5 bits (114), Expect = 7.700e-5
Identity = 21/53 (39.62%), Postives = 29/53 (54.72%), Query Frame = 0
Query:   21 ERAAVDCVCCMGRPRSVVLLPCRHFECCQICGSSL--VKCPTCNAIIADKMNM 71
            +   +DC+ C  RP+SV+LLPCRH   C  C  SL   KCP C +     + +
Sbjct:  148 DETEIDCMICYSRPKSVLLLPCRHCSVCHSCLRSLRDEKCPLCRSSFTSYLTL 200          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig15685.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
F0YGJ4_AURAN5.510e-845.65RING-type domain-containing protein (Fragment) n=1... [more]
D3BG62_POLPP1.480e-545.71RING-type domain-containing protein n=1 Tax=Polysp... [more]
UPI0006B10C4F2.140e-539.62RING finger protein unkempt homolog isoform X1 n=2... [more]
A0A139AJS3_GONPJ3.940e-534.18RING-type domain-containing protein n=1 Tax=Gonapo... [more]
A0A7S3UWY5_HETAK5.050e-543.48Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A813G0G0_POLGL7.700e-539.62RING-type E3 ubiquitin transferase (Fragment) n=1 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 26..65
e-value: 4.6E-9
score: 36.0
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 25..67
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 4..74
e-value: 5.7E-13
score: 50.1
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 27..62
score: 8.845287

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig15685contigP-wetherbeei_contig15685:1129..1353 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig15685.1.1mRNA_P-wetherbeei_contig15685.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig15685 1129..1353 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig15685.1.1 ID=prot_P-wetherbeei_contig15685.1.1|Name=mRNA_P-wetherbeei_contig15685.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=75bp
VRDANSVRQEPATPARGEVIERAAVDCVCCMGRPRSVVLLPCRHFECCQI
CGSSLVKCPTCNAIIADKMNMFIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING