prot_P-wetherbeei_contig13538.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig13538.1.1
Unique Nameprot_P-wetherbeei_contig13538.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length269
Homology
BLAST of mRNA_P-wetherbeei_contig13538.1.1 vs. uniprot
Match: A0A271J9V9_9BACT (Uncharacterized protein n=2 Tax=Bacteroidetes/Chlorobi group TaxID=68336 RepID=A0A271J9V9_9BACT)

HSP 1 Score: 56.6 bits (135), Expect = 1.990e-5
Identity = 69/235 (29.36%), Postives = 94/235 (40.00%), Query Frame = 0
Query:    1 GGEITLRGVTLSGCKAEL----GGGIFLSSGCNLTAADTTFRRNYASKDGGAVYGDEETTMNFERCVFDANNASD--------SGGGIYQYAFNPGGVNLTASTFLSNFA----------TGGLGGGIYARNVTVSGSNFTSNIAKEFGGALATFDDKGPVIDSSLFVKNKANVDGGAVRGPILDFQLAGGDQTTLLT--RSVFTSNVAVRYGGGVYT--SRLEVSDTVFTLNKS 209
            G E+ + G   S   A      GG + L+ G  LT A TTF RNYA   GGA++     T+     VF  N A           GG +Y      G V+LT S F SN A                           S +  +   + GGA+A   +    I +S F+ N+A   GGA+        L G      LT   S  T N +V  GGG+Y     LE+S +V + N++
Sbjct:  391 GAEVGISGAEFSDNDAAPSPGDGGAVHLADG-TLTLASTTFSRNYARNQGGALWVAAGATLTDHGSVFSENTARGLARQTPFLCGGAVY---VGGGTVDLTESMFTSNRAHTCRXXXXXXXXXXXXXXXXXXXXXXXSGYADDSQVD-GGAIAVVGEAAVTISTSEFIDNQAQSSGGAI------VALRGFSSVAPLTIEGSAVTGNFSVFGGGGLYAFGGTLEISTSVLSDNRT 614          
BLAST of mRNA_P-wetherbeei_contig13538.1.1 vs. uniprot
Match: UPI0016892D98 (hypothetical protein n=1 Tax=Oscillatoria sp. FACHB-1406 TaxID=2692846 RepID=UPI0016892D98)

HSP 1 Score: 55.5 bits (132), Expect = 4.520e-5
Identity = 65/228 (28.51%), Postives = 96/228 (42.11%), Query Frame = 0
Query:    3 EITLRGVTLSGCKAE------LGGGIFLSSGCNLTAADTTFRRNYASKDGGA-VYGDEETTMNFERCVFDANNAS---------DSGGGIYQYAFNPGGVNLTASTFLSNFATGGLGGGIYA--RNVTVSGSNFTSNIAKE----------FGGALATFDDKGPVID-----SSLFVKNKANVDGGAVRGPILDFQLAGGDQTTLLTRSVFTSNVA-----VRYGGGV 192
             +TLRG+T++  K         GGGI       L   ++  R N+A+ DGG  ++    + +      FD NN +         + GGG      N   +N++ S+F  N  TG  GG I      +TVS S F SN   +          +GGA+     K  ++D     SS F  NK    GGA    +  +  +GGD  TL   +V  + VA     +  GGG+
Sbjct:   82 NVTLRGLTIANGKTTGVALDGAGGGIRTGINTTLNLQNSVVRNNFANGDGGGGLWASSGSNVTVTNSRFDYNNTNGYQAQGSVGERGGGAIAIGSNSS-LNVSGSSFTGN--TGINGGAINTVLSTLTVSTSTFKSNDTTKGAAFGPDTRGYGGAIYADGGKSAIVDTISITSSRFDSNKGAGQGGA----LFLYTYSGGDSITLKNSTVTGNYVAKDAQNLSLGGGL 302          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13538.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A271J9V9_9BACT1.990e-529.36Uncharacterized protein n=2 Tax=Bacteroidetes/Chlo... [more]
UPI0016892D984.520e-528.51hypothetical protein n=1 Tax=Oscillatoria sp. FACH... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003368Polymorphic outer membrane protein repeatTIGRFAMTIGR01376TIGR01376coord: 92..113
e-value: 0.0027
score: 15.5
coord: 33..52
e-value: 3.4E-4
score: 18.3
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 2..261

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13538contigP-wetherbeei_contig13538:987..1793 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13538.1.1mRNA_P-wetherbeei_contig13538.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig13538 987..1793 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig13538.1.1 ID=prot_P-wetherbeei_contig13538.1.1|Name=mRNA_P-wetherbeei_contig13538.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=269bp
GGEITLRGVTLSGCKAELGGGIFLSSGCNLTAADTTFRRNYASKDGGAVY
GDEETTMNFERCVFDANNASDSGGGIYQYAFNPGGVNLTASTFLSNFATG
GLGGGIYARNVTVSGSNFTSNIAKEFGGALATFDDKGPVIDSSLFVKNKA
NVDGGAVRGPILDFQLAGGDQTTLLTRSVFTSNVAVRYGGGVYTSRLEVS
DTVFTLNKSNRGGGIHSSRATVSDSRLLNNTAGQQGGGIFLGGLEVNLTI
SRVELINCTALIAGGGIFL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003368POMP_repeat
IPR011050Pectin_lyase_fold/virulence