prot_P-wetherbeei_contig1349.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1349.3.1
Unique Nameprot_P-wetherbeei_contig1349.3.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length146
Homology
BLAST of mRNA_P-wetherbeei_contig1349.3.1 vs. uniprot
Match: D7FUM9_ECTSI (Ribosomal protein S23, component of cytosolic 80S ribosome and 40S small subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUM9_ECTSI)

HSP 1 Score: 273 bits (698), Expect = 1.160e-91
Identity = 137/145 (94.48%), Postives = 142/145 (97.93%), Query Frame = 0
Query:    1 MPTGKPSGIRAARKLRVHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVSLLALYKEKKEKPRS 145
            M  GKP+GIRA RKLR+HRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKK+AAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGV+LLALYK+KKEKPRS
Sbjct:   62 MGKGKPAGIRAGRKLRIHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKLAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVALLALYKDKKEKPRS 206          
BLAST of mRNA_P-wetherbeei_contig1349.3.1 vs. uniprot
Match: A0A835Z8V8_9STRA (Putative ribosomal protein S23 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8V8_9STRA)

HSP 1 Score: 269 bits (688), Expect = 4.840e-91
Identity = 135/145 (93.10%), Postives = 141/145 (97.24%), Query Frame = 0
Query:    1 MPTGKPSGIRAARKLRVHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVSLLALYKEKKEKPRS 145
            M  GKPSGIRA RKLR+HRRN+RWASKDYNK+HSVTAMKANPLGG+SMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLN+TDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVS+LALYK KKEKPRS
Sbjct:    1 MGKGKPSGIRAGRKLRIHRRNQRWASKDYNKAHSVTAMKANPLGGASMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNYTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVSILALYKGKKEKPRS 145          
BLAST of mRNA_P-wetherbeei_contig1349.3.1 vs. uniprot
Match: M4BPE8_HYAAE (Uncharacterized protein n=2 Tax=Peronosporaceae TaxID=4777 RepID=M4BPE8_HYAAE)

HSP 1 Score: 256 bits (654), Expect = 7.400e-86
Identity = 131/141 (92.91%), Postives = 133/141 (94.33%), Query Frame = 0
Query:    5 KPSGIRAARKLRVHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVSLLALYKEKKEKPRS 145
            KPSGIR ARKLRVHRR +RWA K YNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRK  RVQLIKN KKIAAFVPRDGCLNF DENDEVLISGFGRRGHAVGDIPGVRFKVVKV+GVSLLALYKEKKEKPRS
Sbjct:    5 KPSGIRCARKLRVHRRTQRWAQKSYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKSCRVQLIKNSKKIAAFVPRDGCLNFVDENDEVLISGFGRRGHAVGDIPGVRFKVVKVSGVSLLALYKEKKEKPRS 145          
BLAST of mRNA_P-wetherbeei_contig1349.3.1 vs. uniprot
Match: A0A4W5LQ08_9TELE (40S ribosomal protein S23 n=31 Tax=Eukaryota TaxID=2759 RepID=A0A4W5LQ08_9TELE)

HSP 1 Score: 255 bits (651), Expect = 4.620e-85
Identity = 127/140 (90.71%), Postives = 133/140 (95.00%), Query Frame = 0
Query:    6 PSGIRAARKLRVHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVSLLALYKEKKEKPRS 145
            P+GIR ARKLRVHRR +RW  K YNKSHS+TAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKC RVQLIKNGKKIAAFVPRDGCLN+ DENDEVLI+GFGRRGHAVGDIPGVRFKVVKVAGVSLLALYK+KKEKPRS
Sbjct:   29 PAGIRCARKLRVHRRTQRWNQKSYNKSHSITAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPRDGCLNYVDENDEVLIAGFGRRGHAVGDIPGVRFKVVKVAGVSLLALYKDKKEKPRS 168          
BLAST of mRNA_P-wetherbeei_contig1349.3.1 vs. uniprot
Match: B8C1Z7_THAPS (RS23, ribosomal protein 23 40S small ribosomal subunit n=15 Tax=Bacillariophyta TaxID=2836 RepID=B8C1Z7_THAPS)

HSP 1 Score: 249 bits (636), Expect = 3.840e-83
Identity = 123/142 (86.62%), Postives = 132/142 (92.96%), Query Frame = 0
Query:    4 GKPSGIRAARKLRVHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVSLLALYKEKKEKPRS 145
            GKP+GIR  RKLR+HRRN+RW    Y K+HSVTAMKANP+GGS+MAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLN+ DENDEVL++GFGR GHAVGDIPGVRFK VKVAGVSLLALYKEKKEKPRS
Sbjct:    2 GKPAGIRTGRKLRIHRRNQRWHDLKYTKAHSVTAMKANPMGGSTMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNYVDENDEVLVAGFGRSGHAVGDIPGVRFKCVKVAGVSLLALYKEKKEKPRS 143          
BLAST of mRNA_P-wetherbeei_contig1349.3.1 vs. uniprot
Match: W7TKK2_9STRA (40s ribosomal protein s23 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKK2_9STRA)

HSP 1 Score: 249 bits (636), Expect = 4.110e-83
Identity = 124/145 (85.52%), Postives = 135/145 (93.10%), Query Frame = 0
Query:    1 MPTGKPSGIRAARKLRVHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVSLLALYKEKKEKPRS 145
            M  GKP+G  A RKLRVHRRNE+WASK +NK+HSVT MKANPLGG++MAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNF DENDEVLI+GFGR GHAVGDIPGVRFKV+KV+GV LLAL+K+KKEKPRS
Sbjct:    1 MGKGKPAGSNAGRKLRVHRRNEKWASKRWNKAHSVTHMKANPLGGAAMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNFVDENDEVLIAGFGRSGHAVGDIPGVRFKVIKVSGVGLLALFKDKKEKPRS 145          
BLAST of mRNA_P-wetherbeei_contig1349.3.1 vs. uniprot
Match: A0A5A8EIQ0_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EIQ0_CAFRO)

HSP 1 Score: 248 bits (633), Expect = 1.180e-82
Identity = 125/145 (86.21%), Postives = 133/145 (91.72%), Query Frame = 0
Query:    1 MPTGKPSGIRAARKLRVHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVSLLALYKEKKEKPRS 145
            M  GKP+GI+AARKLR HRR +RWA K YNKSHS+TAMKANP GG+SMAKGIVLEK+G+EAKQPNSAIRKC RVQLIKNGKKIAAFVPRDG LNF DENDEVLISGFGR GHAVGDIPGVRFKVVKVAGVSLLAL+K KKEKPRS
Sbjct:    1 MTRGKPAGIQAARKLRNHRREQRWAQKTYNKSHSITAMKANPFGGASMAKGIVLEKMGVEAKQPNSAIRKCARVQLIKNGKKIAAFVPRDGSLNFVDENDEVLISGFGRAGHAVGDIPGVRFKVVKVAGVSLLALFKGKKEKPRS 145          
BLAST of mRNA_P-wetherbeei_contig1349.3.1 vs. uniprot
Match: A0A7R9WFA5_9STRA (Hypothetical protein n=4 Tax=Bacillariophyta TaxID=2836 RepID=A0A7R9WFA5_9STRA)

HSP 1 Score: 247 bits (630), Expect = 3.150e-82
Identity = 123/142 (86.62%), Postives = 131/142 (92.25%), Query Frame = 0
Query:    4 GKPSGIRAARKLRVHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVSLLALYKEKKEKPRS 145
            GKP+GIR  RKLR HRR +RW  + Y K+HS+TAMKANP+GGS+MAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLN+ DENDEVLISGFGR GHAVGDIPGVRFKV KVAGVSLLALYKEKKEKPRS
Sbjct:    2 GKPNGIRTGRKLRSHRRQQRWRDQKYCKAHSITAMKANPMGGSTMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNYVDENDEVLISGFGRSGHAVGDIPGVRFKVAKVAGVSLLALYKEKKEKPRS 143          
BLAST of mRNA_P-wetherbeei_contig1349.3.1 vs. uniprot
Match: A0A8E8PJI4_9STRA (40S ribosomal protein S23 n=2 Tax=Placidida sp. TaxID=2810146 RepID=A0A8E8PJI4_9STRA)

HSP 1 Score: 246 bits (629), Expect = 4.790e-82
Identity = 124/145 (85.52%), Postives = 131/145 (90.34%), Query Frame = 0
Query:    1 MPTGKPSGIRAARKLRVHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVSLLALYKEKKEKPRS 145
            M  G P+G+RAARKLR HRR +RWA K YNKSHSV AMKANPLGGSSMAKGIV+EKIGIEAKQPNSAIRKCVRVQLIKN KKI AFVP DGCLNF DENDEVL+SGFGR GHAVGDIPGVRFKVVKVAGVSLLAL+K KKEKPR+
Sbjct:    1 MSKGLPAGMRAARKLRTHRRKQRWAQKHYNKSHSVAAMKANPLGGSSMAKGIVVEKIGIEAKQPNSAIRKCVRVQLIKNSKKITAFVPNDGCLNFVDENDEVLVSGFGRSGHAVGDIPGVRFKVVKVAGVSLLALFKGKKEKPRA 145          
BLAST of mRNA_P-wetherbeei_contig1349.3.1 vs. uniprot
Match: A0A6U0RBQ4_9STRA (Hypothetical protein n=2 Tax=Mediophyceae TaxID=589449 RepID=A0A6U0RBQ4_9STRA)

HSP 1 Score: 246 bits (628), Expect = 6.360e-82
Identity = 122/142 (85.92%), Postives = 133/142 (93.66%), Query Frame = 0
Query:    4 GKPSGIRAARKLRVHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVSLLALYKEKKEKPRS 145
            GKP+GIR  RKLR HRR ++WA K Y K +S+TAM+ANP+GGS+MAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLN+ DENDEVLI+GFGR+GHAVGDIPGVRFKVVKVAGVSLLALYKEKKEKPRS
Sbjct:    2 GKPNGIRTGRKLRNHRREQKWADKGYCKKNSITAMRANPMGGSTMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNYVDENDEVLIAGFGRKGHAVGDIPGVRFKVVKVAGVSLLALYKEKKEKPRS 143          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1349.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUM9_ECTSI1.160e-9194.48Ribosomal protein S23, component of cytosolic 80S ... [more]
A0A835Z8V8_9STRA4.840e-9193.10Putative ribosomal protein S23 n=1 Tax=Tribonema m... [more]
M4BPE8_HYAAE7.400e-8692.91Uncharacterized protein n=2 Tax=Peronosporaceae Ta... [more]
A0A4W5LQ08_9TELE4.620e-8590.7140S ribosomal protein S23 n=31 Tax=Eukaryota TaxID... [more]
B8C1Z7_THAPS3.840e-8386.62RS23, ribosomal protein 23 40S small ribosomal sub... [more]
W7TKK2_9STRA4.110e-8385.5240s ribosomal protein s23 n=2 Tax=Monodopsidaceae ... [more]
A0A5A8EIQ0_CAFRO1.180e-8286.21Uncharacterized protein n=2 Tax=Cafeteria roenberg... [more]
A0A7R9WFA5_9STRA3.150e-8286.62Hypothetical protein n=4 Tax=Bacillariophyta TaxID... [more]
A0A8E8PJI4_9STRA4.790e-8285.5240S ribosomal protein S23 n=2 Tax=Placidida sp. Ta... [more]
A0A6U0RBQ4_9STRA6.360e-8285.92Hypothetical protein n=2 Tax=Mediophyceae TaxID=58... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006032Ribosomal protein S12/S23PFAMPF00164Ribosom_S12_S23coord: 32..144
e-value: 2.6E-50
score: 168.8
IPR006032Ribosomal protein S12/S23PIRSFPIRSF002133RPS12p_RPS12a_RPS23e_RPS12ocoord: 18..145
e-value: 9.0E-33
score: 110.4
IPR006032Ribosomal protein S12/S23PANTHERPTHR1165230S RIBOSOMAL PROTEIN S12 FAMILY MEMBERcoord: 4..145
IPR006032Ribosomal protein S12/S23PROSITEPS00055RIBOSOMAL_S12coord: 62..69
IPR005680Ribosomal protein S23, eukaryotic/archaealTIGRFAMTIGR00982TIGR00982coord: 8..144
e-value: 6.9E-55
score: 182.5
IPR005680Ribosomal protein S23, eukaryotic/archaealCDDcd03367Ribosomal_S23coord: 28..142
e-value: 1.32079E-76
score: 220.989
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 27..145
e-value: 2.0E-45
score: 155.1
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 23..143
NoneNo IPR availablePANTHERPTHR11652:SF1440S RIBOSOMAL PROTEIN S23coord: 4..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1349contigP-wetherbeei_contig1349:2236..3312 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1349.3.1mRNA_P-wetherbeei_contig1349.3.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1349 2227..3312 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1349.3.1 ID=prot_P-wetherbeei_contig1349.3.1|Name=mRNA_P-wetherbeei_contig1349.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=146bp
MPTGKPSGIRAARKLRVHRRNERWASKDYNKSHSVTAMKANPLGGSSMAK
GIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNFTDEND
EVLISGFGRRGHAVGDIPGVRFKVVKVAGVSLLALYKEKKEKPRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006032Ribosomal_S12/S23
IPR005680Ribosomal_S23_euk/arc
IPR012340NA-bd_OB-fold