prot_P-wetherbeei_contig13350.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig13350.1.1
Unique Nameprot_P-wetherbeei_contig13350.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length592
Homology
BLAST of mRNA_P-wetherbeei_contig13350.1.1 vs. uniprot
Match: A0A6H5JYY0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYY0_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 1.610e-27
Identity = 80/212 (37.74%), Postives = 120/212 (56.60%), Query Frame = 0
Query:  388 YLGPRLSDRRVAELQLKEAVAAHSAARAAEEAARHRVGGAGRNVAWWDAALQYVEGDAGDANDMVKRASATVRYEN--EKGAQERRKFPPFSTVAGLRAALTTQLQDVEAKRRRVREMVEELDGDPSGVEARENSLCGKCRADWGQTGPVCRHCRREALLTAFETAVMPYRRPGRDAADVEDGDSGAAL--GFGAGSE----QGAGANRAFQ 591
            Y+   +   R + LQL+E+    ++A A   AA+ R+GG    V WW+ AL Y+E    D  D V+RA   + +E   +     RR FP F+++ GLR AL+ ++++ + KR+ V   +E L  DP  +E   NS C +CRADWG+TGP+C HC+ E  + A+E  V+ +RRP ++ A+V    +G+ L  GFG G E     G G N A Q
Sbjct: 1548 YVATAVGVHRSSRLQLQES--GRASAEALRAAAKKRIGG----VEWWEVALGYMESTR-DEGDFVQRAQLELLHEKAGQHAVMVRRSFPNFTSIGGLRTALSIKIKEAQTKRKEVLRKLESLTTDPGPMEVHSNSNCRRCRADWGKTGPICGHCKVEEHIDAWEACVVYFRRPLKNTANVGGSAAGSHLLSGFGRGGEGISNAGPGVNNAHQ 1752          
BLAST of mRNA_P-wetherbeei_contig13350.1.1 vs. uniprot
Match: D7FHS8_ECTSI (SNF2 helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHS8_ECTSI)

HSP 1 Score: 122 bits (305), Expect = 4.910e-25
Identity = 76/212 (35.85%), Postives = 117/212 (55.19%), Query Frame = 0
Query:  388 YLGPRLSDRRVAELQLKEAVAAHSAARAAEEAARHRVGGAGRNVAWWDAALQYVEGDAGDANDMVKRASATVRYEN--EKGAQERRKFPPFSTVAGLRAALTTQLQDVEAKRRRVREMVEELDGDPSGVEARENSLCGKCRADWGQTGPVCRHCRREALLTAFETAVMPYRRPGRDAADVEDGDSGAAL--GFGAGSE----QGAGANRAFQ 591
            Y+   +   R + LQL+E+    ++A A   AA+ R+GG    V WW+ AL Y+E    + N  V+RA   + +E   +     RR FP F+++ GLR AL+ ++++ + KR+ V   ++ L  DP  +E   NS C +CRADWG+TGP+C HC+ E  + A+E  V+ +RRP ++ AD     +G+     FG G E     G G N A Q
Sbjct: 1647 YVATAVGIHRSSRLQLQES--GRASAEALRAAAKKRIGG----VEWWEVALGYMESTRDEGN-FVQRAQLELLHEKAGQHAVMVRRSFPNFTSIGGLRTALSIKIKEAQTKRKDVLRKLDSLTTDPGPMEVHSNSNCRRCRADWGKTGPICGHCKVEEHIDAWEACVVYFRRPLKNTADAGGSAAGSPFLSRFGPGGEGTNNAGPGVNNAHQ 1851          
BLAST of mRNA_P-wetherbeei_contig13350.1.1 vs. uniprot
Match: A0A8J5XG88_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XG88_DIALT)

HSP 1 Score: 67.8 bits (164), Expect = 5.510e-8
Identity = 31/85 (36.47%), Postives = 48/85 (56.47%), Query Frame = 0
Query:  476 FSTVAGLRAALTTQLQDVEAKRRRVREMVEELDGDPSGVEARENSLCGKCRADWGQTGPVCRHCRREALLTAFETAVMPYRRPGR 560
             +++AG+R  L     +  + R    + +  L  +P   E  EN  CG+CR DWG++GPVC HCR E +L A+E  ++ +RR  R
Sbjct: 1633 LASLAGMRRMLARAAAERASARAATLDGLCALSAEPPVSEVSENRECGRCRVDWGRSGPVCAHCRLEDVLEAYEGTLLTFRRARR 1717          
BLAST of mRNA_P-wetherbeei_contig13350.1.1 vs. uniprot
Match: A0A7S2JSV9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JSV9_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 4.240e-6
Identity = 34/85 (40.00%), Postives = 43/85 (50.59%), Query Frame = 0
Query:  473 FPPFSTVAGLRAALTTQLQDVEAK--------RRRVREMVEELDGDPSGVEARENSLCGKCRADWGQTGPVCRHCRREALLTAFE 549
            FP F +V GL A L  + +D E +             + +  L   P+  E  ENS C KCRADW QTGP CRHC+ E  L  +E
Sbjct:   19 FPAFVSVNGLAAGLDMR-RDGEGEAASSSNKTNNACLDRICALQSTPTDGEILENSHCHKCRADWFQTGPKCRHCKLEESLLEYE 102          
BLAST of mRNA_P-wetherbeei_contig13350.1.1 vs. uniprot
Match: A0A7S2PY25_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PY25_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 2.200e-5
Identity = 32/88 (36.36%), Postives = 46/88 (52.27%), Query Frame = 0
Query:  470 RRKFPPFSTVAGLRAALTTQLQDVEAK--------RRRVREMVEELDGDPSGVEARENSLCGKCRADWGQTGPVCRHCRREALLTAFE 549
            R +FP F+ + GL AAL  ++Q    +        ++R    V +L  D +  E  +NS C +CR+DW Q GPVC+HC  E  L   E
Sbjct:   32 RGRFPGFNDINGLNAALQMRIQQGNDEVGSINNDDQKRCLHTVMKLSSDVTAGEVWDNSHCQRCRSDWQQQGPVCKHCHLEDDLVKLE 119          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig13350.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JYY0_9PHAE1.610e-2737.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHS8_ECTSI4.910e-2535.85SNF2 helicase n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A8J5XG88_DIALT5.510e-836.47Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A7S2JSV9_9STRA4.240e-640.00Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A7S2PY25_9STRA2.200e-536.36Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 483..510
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 287..301
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..82
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 269..360
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 573..592
NoneNo IPR availablePANTHERPTHR45865E3 UBIQUITIN-PROTEIN LIGASE SHPRH FAMILY MEMBERcoord: 238..551

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig13350contigP-wetherbeei_contig13350:77..1852 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig13350.1.1mRNA_P-wetherbeei_contig13350.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig13350 77..1854 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig13350.1.1 ID=prot_P-wetherbeei_contig13350.1.1|Name=mRNA_P-wetherbeei_contig13350.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=592bp
NAPWACFDFAKPKRLLQLRMRFVRVGRGVGRGELEPDDGSDWNRESGSGG
DGSAGGGSSAAKGGDDDDVTEEDASALNISRDNAAMPASAADLNGTGSGG
PGGGRAAEVICWPRECILEASDAMDGTLNAVRRFSLPSLAALMPSAATTV
AVDSTAAAVALETPLTSKWHTVEDFQGSNRTRSWRLKVLRAEIVATASDS
GSAGPTGGAAAVVAGAAAVAAGAAPGGRPRRLMCEVELFESEIEADSLQT
LHISRNMVSLLRERERLECEQRPDADVGGGGSGSDSGSAGGGGSSASPRK
PSKRSRGAVGPAAAAAAAAVLPAATSPPSSPTTPQPAAAPAGGAGPLSPP
GSPRAKAPASWSMTARGASIAAKCAALEAVSIDIRRHYLGPRLSDRRVAE
LQLKEAVAAHSAARAAEEAARHRVGGAGRNVAWWDAALQYVEGDAGDAND
MVKRASATVRYENEKGAQERRKFPPFSTVAGLRAALTTQLQDVEAKRRRV
REMVEELDGDPSGVEARENSLCGKCRADWGQTGPVCRHCRREALLTAFET
AVMPYRRPGRDAADVEDGDSGAALGFGAGSEQGAGANRAFQT
back to top