prot_P-wetherbeei_contig12905.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig12905.1.1
Unique Nameprot_P-wetherbeei_contig12905.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length95
Homology
BLAST of mRNA_P-wetherbeei_contig12905.1.1 vs. uniprot
Match: K3X845_GLOUD (RING-type E3 ubiquitin transferase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X845_GLOUD)

HSP 1 Score: 78.2 bits (191), Expect = 6.760e-15
Identity = 34/58 (58.62%), Postives = 47/58 (81.03%), Query Frame = 0
Query:    7 MSQELTCPICLDVLKDTHVVKECMHRFCGVCITKALREGHF-CPACRVHVSTRRSLRR 63
            ++ ELTCPICL ++++T VV EC+HRFCG CI K LR G+  CP+CR+H+ ++RSLRR
Sbjct:   75 LNAELTCPICLGIIRNTMVVMECLHRFCGECIQKCLRLGNKECPSCRIHIPSKRSLRR 132          
BLAST of mRNA_P-wetherbeei_contig12905.1.1 vs. uniprot
Match: A0A2P4XLU4_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XLU4_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 1.610e-14
Identity = 32/57 (56.14%), Postives = 47/57 (82.46%), Query Frame = 0
Query:    7 MSQELTCPICLDVLKDTHVVKECMHRFCGVCITKALREGHF-CPACRVHVSTRRSLR 62
            ++ +LTCPICL +LK+T VV EC+HRFCG CI+ A+R+ +  CP+CR+H+ ++RSLR
Sbjct:   72 LNADLTCPICLSILKETMVVMECLHRFCGECISTAIRQSNRECPSCRIHIPSKRSLR 128          
BLAST of mRNA_P-wetherbeei_contig12905.1.1 vs. uniprot
Match: A0A2D4C1K4_PYTIN (RING-type E3 ubiquitin transferase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C1K4_PYTIN)

HSP 1 Score: 76.6 bits (187), Expect = 2.180e-14
Identity = 32/58 (55.17%), Postives = 46/58 (79.31%), Query Frame = 0
Query:    7 MSQELTCPICLDVLKDTHVVKECMHRFCGVCITKALREGHF-CPACRVHVSTRRSLRR 63
            ++ +LTCPICL ++++T VV EC+HRFCG CI K LR G   CP+CR+H+ ++RSLR+
Sbjct:   73 LNADLTCPICLGIIRNTEVVMECLHRFCGDCIQKCLRVGXXECPSCRIHIPSKRSLRK 130          
BLAST of mRNA_P-wetherbeei_contig12905.1.1 vs. uniprot
Match: A0A5D6XKN8_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XKN8_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 2.360e-14
Identity = 34/58 (58.62%), Postives = 44/58 (75.86%), Query Frame = 0
Query:    7 MSQELTCPICLDVLKDTHVVKECMHRFCGVCITKALR-EGHFCPACRVHVSTRRSLRR 63
            ++ ELTCPICL V++ T VV EC+HRFCG CI K LR     CP+CR+H+ ++RSLRR
Sbjct:   76 LNAELTCPICLGVIRSTMVVMECLHRFCGECIQKCLRLSNRECPSCRIHIPSKRSLRR 133          
BLAST of mRNA_P-wetherbeei_contig12905.1.1 vs. uniprot
Match: A0A662X7H6_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X7H6_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 2.670e-14
Identity = 31/57 (54.39%), Postives = 46/57 (80.70%), Query Frame = 0
Query:    7 MSQELTCPICLDVLKDTHVVKECMHRFCGVCITKALREGHF-CPACRVHVSTRRSLR 62
            ++ +LTCPICL ++K+T VV EC+HRFCG CI+ A+R+    CP+CR+H+ ++RSLR
Sbjct:   74 LNADLTCPICLGIIKETMVVMECLHRFCGACISTAIRQNQRQCPSCRIHIPSKRSLR 130          
BLAST of mRNA_P-wetherbeei_contig12905.1.1 vs. uniprot
Match: A0A662XZT3_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XZT3_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 3.740e-14
Identity = 31/57 (54.39%), Postives = 46/57 (80.70%), Query Frame = 0
Query:    7 MSQELTCPICLDVLKDTHVVKECMHRFCGVCITKALREGHF-CPACRVHVSTRRSLR 62
            ++ +LTCPICL ++K+T VV EC+HRFCG CI+ A+R+    CP+CR+H+ ++RSLR
Sbjct:  223 LNADLTCPICLGIIKETMVVMECLHRFCGACISTAIRQNQRQCPSCRIHIPSKRSLR 279          
BLAST of mRNA_P-wetherbeei_contig12905.1.1 vs. uniprot
Match: A0A5A8E458_CAFRO (RING-type E3 ubiquitin transferase n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E458_CAFRO)

HSP 1 Score: 74.7 bits (182), Expect = 3.790e-14
Identity = 33/56 (58.93%), Postives = 39/56 (69.64%), Query Frame = 0
Query:    7 MSQELTCPICLDVLKDTHVVKECMHRFCGVCITKALREGHFCPACRVHVSTRRSLR 62
            +  EL CPIC DVLK THVV +CMHRFC  CI +A+R  H CP CR  + +RRS R
Sbjct:   42 LDDELRCPICRDVLKHTHVVMQCMHRFCRRCIERAVRASHCCPFCRESIPSRRSTR 97          
BLAST of mRNA_P-wetherbeei_contig12905.1.1 vs. uniprot
Match: A0A3F2S2W1_9STRA (RING-type E3 ubiquitin transferase n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S2W1_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 5.450e-14
Identity = 31/57 (54.39%), Postives = 46/57 (80.70%), Query Frame = 0
Query:    7 MSQELTCPICLDVLKDTHVVKECMHRFCGVCITKALREG-HFCPACRVHVSTRRSLR 62
            ++ +LTCPICL ++K+T VV EC+HRFCG CI+ A+R+    CP+CR+H+ ++RSLR
Sbjct:   71 LNADLTCPICLGIIKETMVVMECLHRFCGECISTAIRQSKRECPSCRIHIPSKRSLR 127          
BLAST of mRNA_P-wetherbeei_contig12905.1.1 vs. uniprot
Match: A0A0W8CA54_PHYNI (RING-type E3 ubiquitin transferase n=19 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CA54_PHYNI)

HSP 1 Score: 75.5 bits (184), Expect = 5.770e-14
Identity = 31/57 (54.39%), Postives = 46/57 (80.70%), Query Frame = 0
Query:    7 MSQELTCPICLDVLKDTHVVKECMHRFCGVCITKALREG-HFCPACRVHVSTRRSLR 62
            ++ +LTCPICL ++K+T VV EC+HRFCG CI+ A+R+    CP+CR+H+ ++RSLR
Sbjct:   71 LNADLTCPICLGIIKETMVVMECLHRFCGECISTAIRQSKRECPSCRIHIPSKRSLR 127          
BLAST of mRNA_P-wetherbeei_contig12905.1.1 vs. uniprot
Match: A0A225VR01_9STRA (RING-type E3 ubiquitin transferase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VR01_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 5.810e-14
Identity = 31/57 (54.39%), Postives = 46/57 (80.70%), Query Frame = 0
Query:    7 MSQELTCPICLDVLKDTHVVKECMHRFCGVCITKALREG-HFCPACRVHVSTRRSLR 62
            ++ +LTCPICL ++K+T VV EC+HRFCG CI+ A+R+    CP+CR+H+ ++RSLR
Sbjct:   70 LNADLTCPICLGIIKETMVVMECLHRFCGECISTAIRQSKRECPSCRIHIPSKRSLR 126          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12905.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
K3X845_GLOUD6.760e-1558.62RING-type E3 ubiquitin transferase n=1 Tax=Globisp... [more]
A0A2P4XLU4_9STRA1.610e-1456.14RING-type E3 ubiquitin transferase n=1 Tax=Phytoph... [more]
A0A2D4C1K4_PYTIN2.180e-1455.17RING-type E3 ubiquitin transferase n=1 Tax=Pythium... [more]
A0A5D6XKN8_9STRA2.360e-1458.62RING-type E3 ubiquitin transferase n=1 Tax=Pythium... [more]
A0A662X7H6_9STRA2.670e-1454.39RING-type E3 ubiquitin transferase n=1 Tax=Nothoph... [more]
A0A662XZT3_9STRA3.740e-1454.39RING-type E3 ubiquitin transferase n=1 Tax=Nothoph... [more]
A0A5A8E458_CAFRO3.790e-1458.93RING-type E3 ubiquitin transferase n=1 Tax=Cafeter... [more]
A0A3F2S2W1_9STRA5.450e-1454.39RING-type E3 ubiquitin transferase n=3 Tax=Phytoph... [more]
A0A0W8CA54_PHYNI5.770e-1454.39RING-type E3 ubiquitin transferase n=19 Tax=Phytop... [more]
A0A225VR01_9STRA5.810e-1454.39RING-type E3 ubiquitin transferase n=1 Tax=Phytoph... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 13..51
e-value: 1.6E-4
score: 31.1
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 13..52
score: 11.95817
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 2..90
e-value: 4.5E-17
score: 63.7
NoneNo IPR availablePFAMPF13923zf-C3HC4_2coord: 13..51
e-value: 4.8E-13
score: 48.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..95
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 6..58
IPR043540E3 ubiquitin-protein ligase RING1/RING2PANTHERPTHR46076E3 UBIQUITIN-PROTEIN LIGASE RING1 / RING 2 FAMILY MEMBERcoord: 5..63
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 29..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12905contigP-wetherbeei_contig12905:407..1072 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12905.1.1mRNA_P-wetherbeei_contig12905.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig12905 389..1072 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig12905.1.1 ID=prot_P-wetherbeei_contig12905.1.1|Name=mRNA_P-wetherbeei_contig12905.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=95bp
MVLTNAMSQELTCPICLDVLKDTHVVKECMHRFCGVCITKALREGHFCPA
CRVHVSTRRSLRRGATPTLMHSSGASTQTWRSTSGSSTRSSRTKT
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR043540RING1/RING2
IPR017907Znf_RING_CS