prot_P-wetherbeei_contig12888.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig12888.1.1
Unique Nameprot_P-wetherbeei_contig12888.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length475
Homology
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BLAST of mRNA_P-wetherbeei_contig12888.1.1 vs. uniprot
Match: UPI0013EE3B56 (hypothetical protein n=1 Tax=Caulobacter soli TaxID=2708539 RepID=UPI0013EE3B56)

HSP 1 Score: 57.8 bits (138), Expect = 4.280e-5
Identity = 59/139 (42.45%), Postives = 82/139 (58.99%), Query Frame = 0 
Query:    3 ATRDLTLTATAGSVTISTLAQAGDDVRVSATTGIV-AGAAILTSTGAGTDTEADGFNVVASTSGGNATVGTA-----TNGATGDVTVTAAAGAASLTSGDSKNDLIVSGKSASLGTGTAAQDIKVTGTAGDAKVTTSAT 135
            A RD+ LT T G+ +++    AGDD+ ++A+ G V A  AIL STG G   +A   +++  +  G+ T  T      T    GD+TV AA  A   T+ DS  DL ++G SASL  G+AA+D+ VT T G+A VTTSAT
Sbjct:  324 AVRDVFLTGTTGA-SVANRIFAGDDIEITASNGDVDASGAILRSTGLGASDDA---HILLRSDTGSVTADTTLLTQGTGAQAGDITVQAATDAIVGTA-DSTRDLKITGTSASLDNGSAARDLFVTATTGNATVTTSAT 457
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12888.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI0013EE3B564.280e-542.45hypothetical protein n=1 Tax=Caulobacter soli TaxI... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12888contigP-wetherbeei_contig12888:144..1568 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12888.1.1mRNA_P-wetherbeei_contig12888.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig12888 144..1568 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig12888.1.1 ID=prot_P-wetherbeei_contig12888.1.1|Name=mRNA_P-wetherbeei_contig12888.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=475bp
GTATRDLTLTATAGSVTISTLAQAGDDVRVSATTGIVAGAAILTSTGAGT
DTEADGFNVVASTSGGNATVGTATNGATGDVTVTAAAGAASLTSGDSKND
LIVSGKSASLGTGTAAQDIKVTGTAGDAKVTTSATATRDVIVSSTGGDAQ
VTTASGRDIAVSGGAASLTTGTATRDIAVSGASATLDSGTASGDVTLTAS
TGDANVTTKAQGANVGITAAAGNSNVALATATAGDVTVSAANGAASLTSS
TATRDLTLSGKSATLGSGVAGRDATLTATAGDATVTTLAQAGDDVRVMAG
AGSVVAGGAVVQSTGAGADTEADGANAVVTASGVATVGTANSGATGDVTV
TASGGAATLDAGSAGRDLLVDGFSVSSAGLLKAGRDVAVRGRTGSIAIKD
AQAGDDVVLRAPGSITVAGGLTTTNGPDSDATAAGDVLYATGKTSFNGLT
FDLAGSTVDLRTTTGNIAVAGAIDA
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