prot_P-wetherbeei_contig12709.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig12709.2.1
Unique Nameprot_P-wetherbeei_contig12709.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length152
Homology
BLAST of mRNA_P-wetherbeei_contig12709.2.1 vs. uniprot
Match: A0A3C2B6N5_9ACTN (Ribonuclease 3 n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2B6N5_9ACTN)

HSP 1 Score: 207 bits (526), Expect = 5.490e-65
Identity = 106/142 (74.65%), Postives = 125/142 (88.03%), Query Frame = 0
Query:    1 VNASALAEVAVEIDLGACLLLGKGEASAGGRMKPSILSDALEAVLGAIYLDGGVQAAADVIDQLFTERLAQAVQRLDRLDYKTLLQEMTARLYDTAPVYVITDTGPDHAKHFFATVMVGGQALGDGEGKSKKTAEQAAAEQA 142
            VNASALAEVAVEI +G CLLLGKGE++AGGR KPSILSDA EAVLGA+YLDGG +AAA ++++LF +R+A A  RLDRLDYKT+LQE+TAR +DTAPVYVI+D+GPDH K FFATV+V GQ +G GEG+SKK AEQAAAEQA
Sbjct:   84 VNASALAEVAVEIGIGPCLLLGKGESAAGGRSKPSILSDAFEAVLGAVYLDGGAEAAATMVERLFAQRMASAALRLDRLDYKTVLQELTARRFDTAPVYVISDSGPDHEKRFFATVIVAGQTVGKGEGRSKKLAEQAAAEQA 225          
BLAST of mRNA_P-wetherbeei_contig12709.2.1 vs. uniprot
Match: A0A7X9KJV6_9ACTN (Ribonuclease 3 n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A7X9KJV6_9ACTN)

HSP 1 Score: 202 bits (514), Expect = 5.430e-63
Identity = 105/142 (73.94%), Postives = 126/142 (88.73%), Query Frame = 0
Query:    1 VNASALAEVAVEIDLGACLLLGKGEASAGGRMKPSILSDALEAVLGAIYLDGGVQAAADVIDQLFTERLAQAVQRLDRLDYKTLLQEMTARLYDTAPVYVITDTGPDHAKHFFATVMVGGQALGDGEGKSKKTAEQAAAEQA 142
            VNASALAEVA+EI LG C+LLGKGE +AGGR KPSILSDA EAVLGA+YLDGG  AA  ++++LFT+R+A A  RLDRLD+KT+LQE+TARL+DTAPVYV++D+GPDH K FFATV+V GQ++G GEG+SKKTAEQAAAEQA
Sbjct:   82 VNASALAEVALEIRLGDCILLGKGEDAAGGRSKPSILSDAFEAVLGAVYLDGGPPAAFGLVERLFTDRMATAALRLDRLDFKTVLQELTARLHDTAPVYVLSDSGPDHDKRFFATVIVAGQSVGYGEGRSKKTAEQAAAEQA 223          
BLAST of mRNA_P-wetherbeei_contig12709.2.1 vs. uniprot
Match: A0A7K1B556_9ACTN (Ribonuclease 3 n=2 Tax=root TaxID=1 RepID=A0A7K1B556_9ACTN)

HSP 1 Score: 200 bits (509), Expect = 4.910e-62
Identity = 108/148 (72.97%), Postives = 128/148 (86.49%), Query Frame = 0
Query:    1 VNASALAEVAVEIDLGACLLLGKGEASAGGRMKPSILSDALEAVLGAIYLDGGVQAAADVIDQLFTERLAQAVQRLDRLDYKTLLQEMTARLYDTAPVYVITDTGPDHAKHFFATVMVGGQALGDGEGKSKKTAEQAAAEQACDALAA 148
            VNASALAEVAV IDLG CLLLGKGE++AGGRMKPSILSDALEAV+GA+YLDGGV AAA +I+ LFTE L +A Q+LDRLD+KTLLQE+TAR++DTAPVYVI++TGPDH K F A V+VGG+++G G G+SKK AEQAAA  A   L+A
Sbjct:  114 VNASALAEVAVGIDLGPCLLLGKGESAAGGRMKPSILSDALEAVIGAVYLDGGVVAAARLIEHLFTEPLQRAAQQLDRLDHKTLLQELTARMFDTAPVYVISETGPDHQKTFTAGVVVGGRSVGQGTGRSKKLAEQAAALAAYTLLSA 261          
BLAST of mRNA_P-wetherbeei_contig12709.2.1 vs. uniprot
Match: A0A6I3EVJ5_9ACTN (Ribonuclease 3 n=2 Tax=root TaxID=1 RepID=A0A6I3EVJ5_9ACTN)

HSP 1 Score: 194 bits (493), Expect = 8.520e-60
Identity = 101/146 (69.18%), Postives = 121/146 (82.88%), Query Frame = 0
Query:    1 VNASALAEVAVEIDLGACLLLGKGEASAGGRMKPSILSDALEAVLGAIYLDGGVQAAADVIDQLFTERLAQAVQRLDRLDYKTLLQEMTARLYDTAPVYVITDTGPDHAKHFFATVMVGGQALGDGEGKSKKTAEQAAAEQACDAL 146
            VNAS LAE+A+EI +G CLLLGKGE +AGGR KPSILSDALEAVLGA+YLDGG  AA  ++++L   R+  A  RLDRLDYKT+LQE+TAR+YD+APVYV++++GPDH K FFATV+V G  LG GEG+SKK AEQAAAEQA  AL
Sbjct:   98 VNASTLAEIALEIGIGECLLLGKGEDAAGGRTKPSILSDALEAVLGAVYLDGGTAAAFALVERLVAHRMTSAALRLDRLDYKTVLQELTARVYDSAPVYVLSESGPDHQKQFFATVIVDGDTLGKGEGRSKKIAEQAAAEQAWMAL 243          
BLAST of mRNA_P-wetherbeei_contig12709.2.1 vs. uniprot
Match: A0A6I3X516_9ACTN (Ribonuclease 3 n=2 Tax=root TaxID=1 RepID=A0A6I3X516_9ACTN)

HSP 1 Score: 190 bits (482), Expect = 3.500e-58
Identity = 98/148 (66.22%), Postives = 120/148 (81.08%), Query Frame = 0
Query:    1 VNASALAEVAVEIDLGACLLLGKGEASAGGRMKPSILSDALEAVLGAIYLDGGVQAAADVIDQLFTERLAQAVQRLDRLDYKTLLQEMTARLYDTAPVYVITDTGPDHAKHFFATVMVGGQALGDGEGKSKKTAEQAAAEQACDALAA 148
            VNA+ALA+VA  +D+G+CLLLGKGE++AGGR KPSILSDA EAVLGAIYLD G  AA   ++++  ERL QAVQ+L RLDYKTLLQE+  R +D APVYV+ + GPDHAKHF+ATV++ G+  G+GEG SKK AEQ AA  ACD+LAA
Sbjct:   95 VNAAALADVAAGLDIGSCLLLGKGESAAGGRSKPSILSDAFEAVLGAIYLDAGTTAAYAFVERVIGERLRQAVQQLHRLDYKTLLQELAVREFDAAPVYVLREEGPDHAKHFYATVLIAGRPWGEGEGSSKKQAEQVAAMVACDSLAA 242          
BLAST of mRNA_P-wetherbeei_contig12709.2.1 vs. uniprot
Match: A0A6I3CAT3_9ACTN (Ribonuclease 3 n=2 Tax=root TaxID=1 RepID=A0A6I3CAT3_9ACTN)

HSP 1 Score: 186 bits (471), Expect = 4.920e-57
Identity = 99/148 (66.89%), Postives = 119/148 (80.41%), Query Frame = 0
Query:    1 VNASALAEVAVEIDLGACLLLGKGEASAGGRMKPSILSDALEAVLGAIYLDGGVQAAADVIDQLFTERLAQAVQRLDRLDYKTLLQEMTARLYDTAPVYVITDTGPDHAKHFFATVMVGGQALGDGEGKSKKTAEQAAAEQACDALAA 148
            VNA+ALA +AVE+D+G+CLLLGKGE+ AGGR KPSILSDALEAVLGAIYLD G  AA + ++++  ERL  AV++L RLDYKTLLQE+  R +D APVYVI + GPDHAK FFATVM+ GQ  G+G G SKK AEQ AA  ACD+L+A
Sbjct:   56 VNATALAAMAVELDIGSCLLLGKGESFAGGRAKPSILSDALEAVLGAIYLDAGSGAAYEFVERVLGERLLLAVKQLHRLDYKTLLQEIVVREFDAAPVYVIREEGPDHAKQFFATVMISGQQWGEGTGTSKKQAEQVAAMVACDSLSA 203          
BLAST of mRNA_P-wetherbeei_contig12709.2.1 vs. uniprot
Match: A0A6L6CVM9_9ACTN (Ribonuclease III (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A6L6CVM9_9ACTN)

HSP 1 Score: 162 bits (411), Expect = 1.280e-47
Identity = 87/146 (59.59%), Postives = 107/146 (73.29%), Query Frame = 0
Query:    1 VNASALAEVAVEIDLGACLLLGKGEASAGGRMKPSILSDALEAVLGAIYLDGGVQAAADVIDQLFTERLAQAVQRLDRLDYKTLLQEMTARLYDTAPVYVITDTGPDHAKHFFATVMVGGQALGDGEGKSKKTAEQAAAEQACDAL 146
            VNA ALAE+AV++D+G+C++LGKGEA+AGG  K SILSDA EAV+GA+YLD G   A  V+  L   R+A AV  LDRLD KT LQE+ +RL D    Y + D GPDH K F+ATV++G + LG GEG+SKK AEQ AAE ACD L
Sbjct:   80 VNAIALAEMAVDLDIGSCIMLGKGEAAAGGNEKTSILSDAFEAVIGAVYLDAGPTVAHSVVSALMAPRIADAVGGLDRLDAKTRLQELASRLLDQHVHYRVEDEGPDHEKMFYATVIIGERELGSGEGRSKKAAEQIAAEIACDTL 225          
BLAST of mRNA_P-wetherbeei_contig12709.2.1 vs. uniprot
Match: A0A2E8Y1G8_9ACTN (Ribonuclease 3 n=5 Tax=Actinobacteria TaxID=201174 RepID=A0A2E8Y1G8_9ACTN)

HSP 1 Score: 160 bits (406), Expect = 7.310e-47
Identity = 93/150 (62.00%), Postives = 108/150 (72.00%), Query Frame = 0
Query:    1 VNASALAEVAVEIDLGACLLLGKGEASAGGRMKPSILSDALEAVLGAIYLDGGVQAAADVIDQLFTERLAQAVQRLDRLDYKTLLQEMTARLYDTAPVYVITDTGPDHAKHFFATVMVGGQALGDGEGKSKKTAEQAAAEQACDALAAAE 150
            VNASALAEVA +IDLGA LLLG GE +AGGR K SILSDALEAV GA+Y+D G Q A DV+  L   RLA A  RLDRLD K+ LQE+ A L   +P Y IT  GPDH K F ATV++ G+ LG G G+SKK AEQ AA +A DAL A++
Sbjct:   80 VNASALAEVARDIDLGAYLLLGNGEDAAGGRNKESILSDALEAVFGAVYIDAGSQQAFDVVRSLIAPRLAAAPSRLDRLDQKSTLQELLASLGRPSPSYTITSQGPDHDKEFTATVVIDGEVLGSGVGRSKKLAEQQAAGEAIDALHASD 229          
BLAST of mRNA_P-wetherbeei_contig12709.2.1 vs. uniprot
Match: A0A6N2DJ17_9ACTN (Ribonuclease 3 n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A6N2DJ17_9ACTN)

HSP 1 Score: 160 bits (404), Expect = 3.710e-46
Identity = 90/139 (64.75%), Postives = 105/139 (75.54%), Query Frame = 0
Query:    1 VNASALAEVAVEIDLGACLLLGKGEASAGGRMKPSILSDALEAVLGAIYLDGGVQAAADVIDQLFTERLAQAVQRLDRLDYKTLLQEMTARLYDTAPVYVITDTGPDHAKHFFATVMVGGQALGDGEGKSKKTAEQAAA 139
            VNA ALAEVAVE+DLG  LLLGKGE +AGGR K SILSDA EAVLGA+Y+DGG + A  V+++    RL +AV  LDRLD+K+ LQE+TARL   AP Y++T  GPDHAK F A V V    LG GEG+SKKTAEQAAA
Sbjct:   94 VNAGALAEVAVELDLGRHLLLGKGEDAAGGREKTSILSDAFEAVLGAVYVDGGTEVAYQVVERFIGPRLVEAVGTLDRLDFKSSLQELTARLGRGAPEYLLTSDGPDHAKRFRAEVWVDRGRLGIGEGRSKKTAEQAAA 232          
BLAST of mRNA_P-wetherbeei_contig12709.2.1 vs. uniprot
Match: A0A7Y2EW04_9ACTN (Ribonuclease 3 n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A7Y2EW04_9ACTN)

HSP 1 Score: 158 bits (399), Expect = 9.090e-46
Identity = 84/138 (60.87%), Postives = 105/138 (76.09%), Query Frame = 0
Query:    1 VNASALAEVAVEIDLGACLLLGKGEASAGGRMKPSILSDALEAVLGAIYLDGGVQAAADVIDQLFTERLAQAVQRLDRLDYKTLLQEMTARLYDTAPVYVITDTGPDHAKHFFATVMVGGQALGDGEGKSKKTAEQAA 138
            VNA  LAE+A EI LG  LLLGKGEA+A G  KPSILSDA EAVLGA+YLDGGV AA  ++D+    R+++++ R+D+LD+KT LQE+ AR+   AP YV+T TGPDHAK F A V V G+ +G+G G+SKK AEQAA
Sbjct:   86 VNAITLAEIAEEIGLGPYLLLGKGEAAADGAEKPSILSDAFEAVLGAVYLDGGVPAAHAMVDRWVAPRMSKSIDRIDQLDHKTQLQELCARVGREAPAYVVTSTGPDHAKSFVARVTVDGEPMGEGTGRSKKAAEQAA 223          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12709.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C2B6N5_9ACTN5.490e-6574.65Ribonuclease 3 n=1 Tax=Acidimicrobiaceae bacterium... [more]
A0A7X9KJV6_9ACTN5.430e-6373.94Ribonuclease 3 n=2 Tax=Actinobacteria TaxID=201174... [more]
A0A7K1B556_9ACTN4.910e-6272.97Ribonuclease 3 n=2 Tax=root TaxID=1 RepID=A0A7K1B5... [more]
A0A6I3EVJ5_9ACTN8.520e-6069.18Ribonuclease 3 n=2 Tax=root TaxID=1 RepID=A0A6I3EV... [more]
A0A6I3X516_9ACTN3.500e-5866.22Ribonuclease 3 n=2 Tax=root TaxID=1 RepID=A0A6I3X5... [more]
A0A6I3CAT3_9ACTN4.920e-5766.89Ribonuclease 3 n=2 Tax=root TaxID=1 RepID=A0A6I3CA... [more]
A0A6L6CVM9_9ACTN1.280e-4759.59Ribonuclease III (Fragment) n=1 Tax=Actinomycetia ... [more]
A0A2E8Y1G8_9ACTN7.310e-4762.00Ribonuclease 3 n=5 Tax=Actinobacteria TaxID=201174... [more]
A0A6N2DJ17_9ACTN3.710e-4664.75Ribonuclease 3 n=1 Tax=Ilumatobacter sp. TaxID=196... [more]
A0A7Y2EW04_9ACTN9.090e-4660.87Ribonuclease 3 n=1 Tax=Ilumatobacter sp. TaxID=196... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014720Double-stranded RNA-binding domainSMARTSM00358DRBM_3coord: 81..147
e-value: 6.1E-20
score: 82.3
IPR014720Double-stranded RNA-binding domainPFAMPF00035dsrmcoord: 81..146
e-value: 5.7E-13
score: 49.4
IPR014720Double-stranded RNA-binding domainPROSITEPS50137DS_RBDcoord: 80..148
score: 17.524652
IPR036389Ribonuclease III, endonuclease domain superfamilyGENE3D1.10.1520.10Ribonuclease III domaincoord: 1..72
e-value: 7.9E-16
score: 60.0
IPR036389Ribonuclease III, endonuclease domain superfamilySUPERFAMILY69065RNase III domain-likecoord: 1..83
IPR000999Ribonuclease III domainPFAMPF14622Ribonucleas_3_3coord: 1..65
e-value: 2.1E-15
score: 57.0
IPR000999Ribonuclease III domainPROSITEPS50142RNASE_3_2coord: 1..53
score: 15.453183
IPR000999Ribonuclease III domainCDDcd00593RIBOccoord: 1..72
e-value: 6.94909E-22
score: 83.0458
NoneNo IPR availableGENE3D3.30.160.20coord: 73..148
e-value: 1.3E-20
score: 75.3
NoneNo IPR availableCDDcd10845DSRM_RNAse_III_familycoord: 80..134
e-value: 3.15056E-17
score: 69.4435
NoneNo IPR availableSUPERFAMILY54768dsRNA-binding domain-likecoord: 34..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12709contigP-wetherbeei_contig12709:1493..1948 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12709.2.1mRNA_P-wetherbeei_contig12709.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig12709 1493..1948 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig12709.2.1 ID=prot_P-wetherbeei_contig12709.2.1|Name=mRNA_P-wetherbeei_contig12709.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=152bp
VNASALAEVAVEIDLGACLLLGKGEASAGGRMKPSILSDALEAVLGAIYL
DGGVQAAADVIDQLFTERLAQAVQRLDRLDYKTLLQEMTARLYDTAPVYV
ITDTGPDHAKHFFATVMVGGQALGDGEGKSKKTAEQAAAEQACDALAAAE
A*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014720dsRBD_dom
IPR036389RNase_III_sf
IPR000999RNase_III_dom