prot_P-wetherbeei_contig12684.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig12684.1.1
Unique Nameprot_P-wetherbeei_contig12684.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length39
Homology
BLAST of mRNA_P-wetherbeei_contig12684.1.1 vs. uniprot
Match: A0A1S7NUZ1_RHIRD (Uncharacterized protein n=3 Tax=Rhizobium radiobacter TaxID=358 RepID=A0A1S7NUZ1_RHIRD)

HSP 1 Score: 59.7 bits (143), Expect = 1.300e-10
Identity = 27/27 (100.00%), Postives = 27/27 (100.00%), Query Frame = 0
Query:    1 MVGPGRLELPTPRLSSVCSNQLSYGPI 27
            MVGPGRLELPTPRLSSVCSNQLSYGPI
Sbjct:   41 MVGPGRLELPTPRLSSVCSNQLSYGPI 67          
BLAST of mRNA_P-wetherbeei_contig12684.1.1 vs. uniprot
Match: A0A1S7U9J2_9HYPH (Uncharacterized protein n=1 Tax=Agrobacterium salinitolerans str. Hayward 0363 TaxID=1183434 RepID=A0A1S7U9J2_9HYPH)

HSP 1 Score: 59.7 bits (143), Expect = 2.530e-10
Identity = 27/27 (100.00%), Postives = 27/27 (100.00%), Query Frame = 0
Query:    1 MVGPGRLELPTPRLSSVCSNQLSYGPI 27
            MVGPGRLELPTPRLSSVCSNQLSYGPI
Sbjct:   41 MVGPGRLELPTPRLSSVCSNQLSYGPI 67          
BLAST of mRNA_P-wetherbeei_contig12684.1.1 vs. uniprot
Match: UPI001A8CC5EA (hypothetical protein n=1 Tax=Agrobacterium rosae TaxID=1972867 RepID=UPI001A8CC5EA)

HSP 1 Score: 49.3 bits (116), Expect = 1.480e-6
Identity = 22/23 (95.65%), Postives = 23/23 (100.00%), Query Frame = 0
Query:    6 RLELPTPRLSSVCSNQLSYGPIQ 28
            RLELPTPRLSSVCSNQLSYGPI+
Sbjct:    1 RLELPTPRLSSVCSNQLSYGPIR 23          
BLAST of mRNA_P-wetherbeei_contig12684.1.1 vs. uniprot
Match: E0XUM0_9BACT (Uncharacterized protein n=1 Tax=uncultured Acidobacteriales bacterium HF0200_23L05 TaxID=710732 RepID=E0XUM0_9BACT)

HSP 1 Score: 46.2 bits (108), Expect = 1.330e-5
Identity = 21/25 (84.00%), Postives = 22/25 (88.00%), Query Frame = 0
Query:    2 VGPGRLELPTPRLSSVCSNQLSYGP 26
            +G GR ELPTPRLSSVCSNQLSY P
Sbjct:    1 MGLGRFELPTPRLSSVCSNQLSYRP 25          
BLAST of mRNA_P-wetherbeei_contig12684.1.1 vs. uniprot
Match: A0A8H8Z0I0_9PROT (Uncharacterized protein n=1 Tax=Nitrosomonas nitrosa TaxID=52442 RepID=A0A8H8Z0I0_9PROT)

HSP 1 Score: 44.7 bits (104), Expect = 5.400e-5
Identity = 21/28 (75.00%), Postives = 23/28 (82.14%), Query Frame = 0
Query:    1 MVGPGRLELPTPRLSSVCSNQLSYGPIQ 28
            +VG G LE PTPRLSSVCSNQLSY P +
Sbjct:   29 LVGLGGLEPPTPRLSSVCSNQLSYRPTK 56          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12684.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A1S7NUZ1_RHIRD1.300e-10100.00Uncharacterized protein n=3 Tax=Rhizobium radiobac... [more]
A0A1S7U9J2_9HYPH2.530e-10100.00Uncharacterized protein n=1 Tax=Agrobacterium sali... [more]
UPI001A8CC5EA1.480e-695.65hypothetical protein n=1 Tax=Agrobacterium rosae T... [more]
E0XUM0_9BACT1.330e-584.00Uncharacterized protein n=1 Tax=uncultured Acidoba... [more]
A0A8H8Z0I0_9PROT5.400e-575.00Uncharacterized protein n=1 Tax=Nitrosomonas nitro... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableANTIFAMANF00014Spurious_ORF_14coord: 2..26
e-value: 6.1E-10
score: 36.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12684contigP-wetherbeei_contig12684:245..361 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12684.1.1mRNA_P-wetherbeei_contig12684.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig12684 76..376 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig12684.1.1 ID=prot_P-wetherbeei_contig12684.1.1|Name=mRNA_P-wetherbeei_contig12684.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=39bp
MVGPGRLELPTPRLSSVCSNQLSYGPIQSNRSCGFLSS*
back to top