prot_P-wetherbeei_contig1262.1.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1262.1.2
Unique Nameprot_P-wetherbeei_contig1262.1.2
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length570
Homology
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BLAST of mRNA_P-wetherbeei_contig1262.1.2 vs. uniprot
Match: D8LJJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJJ7_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 7.760e-20
Identity = 71/184 (38.59%), Postives = 94/184 (51.09%), Query Frame = 0 
Query:    1 MDLRMMGLTKAEIAKAKDAIADLKREKEVTVTRPHPLLEQRNAATYGRLYLPGALSSYEYYLAVFGAPAPVAEGRLVFAEPLDGCSDYVTYFGGSRQPKVSWWRRLWRRWRWGDAGXXXXXXXXXXGALEDGRPTFVVVYRGKCSFADKARNVGAAETSTGAAAMVIVN---ADEELFRVAAVI 181
            MDLR+MGL+ A+IA  K    +L+ E++VT  R HPLL++RN  TYGRL+L  + SS+E+YLA FG P PV E  L++AEP D C                                           L  G  T V+  RG+CSF DKA  V     S+ A A+V++N     E+LFRVAA +
Sbjct:  131 MDLRLMGLSPADIATVKQHAEELRVERDVTEERLHPLLQRRNELTYGRLFLDRSASSFEFYLAGFGPPVPVDEASLIWAEPRDACGTLTN------------------------------------SELLPG--TIVLAERGRCSFVDKANTVA----SSNALALVVINNGPEGEDLFRVAATL 272
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1262.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LJJ7_ECTSI7.760e-2038.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 6..33
NoneNo IPR availableGENE3D3.50.30.30coord: 26..266
e-value: 2.9E-9
score: 39.0
coord: 313..476
e-value: 4.2E-21
score: 77.6
NoneNo IPR availableSUPERFAMILY52025PA domaincoord: 394..478
IPR003137PA domainPFAMPF02225PAcoord: 388..462
e-value: 8.1E-11
score: 41.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1262contigP-wetherbeei_contig1262:279..3562 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1262.1.2mRNA_P-wetherbeei_contig1262.1.2Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1262 256..3748 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1262.1.2 ID=prot_P-wetherbeei_contig1262.1.2|Name=mRNA_P-wetherbeei_contig1262.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=570bp
MDLRMMGLTKAEIAKAKDAIADLKREKEVTVTRPHPLLEQRNAATYGRLY
LPGALSSYEYYLAVFGAPAPVAEGRLVFAEPLDGCSDYVTYFGGSRQPKV
SWWRRLWRRWRWGDAGGGGGGGGDGGGALEDGRPTFVVVYRGKCSFADKA
RNVGAAETSTGAAAMVIVNADEELFRVAAVIAKSRAPAPAAAQDAAGALK
PATTEAVGAAAADAAAAAAAASAAGGVEAEAGVPEGLAVAMVRASAGPQL
AAAVAWGGGQVQARLVPLECESKIAECNPILPEESLMTLQVRGGNMAAAL
TADALAGRGADAADAAAAAAVIVEVDFVSARFGTTLPPQPVRLVWPERAD
GCPPMAAPVSEEGGGGGVGRAAERDLAAAEAVVVAALAAGEVAGVAGAAV
VVRRGGCSFGNKAAAAQASGARAVVIVDDGGEPLQPIGASDAQAKSLYIP
AVFVTREAGERLQAVAAAAAAAVADAAGGGGAGGGGERSSGGGGTVWVAF
QPDDAVAVAWEALTAAHVEGEAARQAAVEAALGSVGKSECQAAWARREAA
TLLQGAGSAGGVVDAKDEL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003137PA_domain