prot_P-wetherbeei_contig12484.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig12484.1.1
Unique Nameprot_P-wetherbeei_contig12484.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length83
Homology
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BLAST of mRNA_P-wetherbeei_contig12484.1.1 vs. uniprot
Match: A0A836CDC0_9STRA (ABC transporter transmembrane region 2-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDC0_9STRA)

HSP 1 Score: 112 bits (280), Expect = 4.700e-27
Identity = 59/83 (71.08%), Postives = 70/83 (84.34%), Query Frame = 0 
Query:    1 HLPLYVCVQFSEYLGSIVNYAAVGGAILWLSKAEDASQAEISSLVARGSYSCLYLINAFSQGLDAAAAAAAASGSAGRVVELL 83
            HLPLY CVQF +Y+GSIVNYAAVG +I +L+KA  AS+AEISSL+ARGSYSCLY+INAFS GLDA+A+      SAGRV+ELL
Sbjct:  401 HLPLYACVQFFDYVGSIVNYAAVGISIFYLTKAHAASEAEISSLLARGSYSCLYIINAFSMGLDASASLTVVRASAGRVMELL 483
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BLAST of mRNA_P-wetherbeei_contig12484.1.1 vs. uniprot
Match: D7FQX4_ECTSI (ATP-binding cassette, sub-family D, member 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQX4_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 2.390e-24
Identity = 57/83 (68.67%), Postives = 69/83 (83.13%), Query Frame = 0 
Query:    1 HLPLYVCVQFSEYLGSIVNYAAVGGAILWLSKAEDASQAEISSLVARGSYSCLYLINAFSQGLDAAAAAAAASGSAGRVVELL 83
            H+PLY+  QF +YLGSIVNYAAVGGAIL+LSKAE   +AEI++LVARGS+SCLYLI+AFS+ L A+ AA+   GSA RV ELL
Sbjct:  389 HVPLYLFTQFFDYLGSIVNYAAVGGAILYLSKAEGMGEAEIAALVARGSFSCLYLIDAFSKALRASEAASRMGGSARRVAELL 471
[Close]
BLAST of mRNA_P-wetherbeei_contig12484.1.1 vs. uniprot
Match: A0A6H5KC31_9PHAE (ABC transporter domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC31_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 6.040e-24
Identity = 57/83 (68.67%), Postives = 69/83 (83.13%), Query Frame = 0 
Query:    1 HLPLYVCVQFSEYLGSIVNYAAVGGAILWLSKAEDASQAEISSLVARGSYSCLYLINAFSQGLDAAAAAAAASGSAGRVVELL 83
            H+PLY+  QF +YLGSIVNYAAVGGAIL+LSKAE   +AEI++LVARGS+SCLYLI+AFS+ L A+ AA+   GSA RV ELL
Sbjct:   92 HVPLYLFTQFFDYLGSIVNYAAVGGAILYLSKAEGMGEAEIAALVARGSFSCLYLIDAFSKVLRASEAASRMGGSARRVAELL 174
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12484.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A836CDC0_9STRA4.700e-2771.08ABC transporter transmembrane region 2-domain-cont... [more]
D7FQX4_ECTSI2.390e-2468.67ATP-binding cassette, sub-family D, member 4 n=1 T... [more]
A0A6H5KC31_9PHAE6.040e-2468.67ABC transporter domain-containing protein n=1 Tax=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig12484contigP-wetherbeei_contig12484:1705..1953 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig12484.1.1mRNA_P-wetherbeei_contig12484.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig12484 1705..1953 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig12484.1.1 ID=prot_P-wetherbeei_contig12484.1.1|Name=mRNA_P-wetherbeei_contig12484.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=83bp
HLPLYVCVQFSEYLGSIVNYAAVGGAILWLSKAEDASQAEISSLVARGSY
SCLYLINAFSQGLDAAAAAAAASGSAGRVVELL
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