prot_P-wetherbeei_contig1227.4.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig1227.4.1
Unique Nameprot_P-wetherbeei_contig1227.4.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length509
Homology
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BLAST of mRNA_P-wetherbeei_contig1227.4.1 vs. uniprot
Match: A0A835QR79_VANPL (Uncharacterized protein n=2 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835QR79_VANPL)

HSP 1 Score: 72.4 bits (176), Expect = 4.990e-10
Identity = 31/57 (54.39%), Postives = 39/57 (68.42%), Query Frame = 0 
Query:  409 PSVVCTVAGCGKLFTMRKNLLKHIKVIHEKERPFACRYAVCARPFAYKHVRDKHEKT 465
            P + C+  GC   ++ + NL KH+K IHEK RPFACR + C + F YKHVRD HEKT
Sbjct:  258 PKLKCSFEGCEHTYSRKSNLKKHVKAIHEKLRPFACRTSGCHQKFHYKHVRDAHEKT 314
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BLAST of mRNA_P-wetherbeei_contig1227.4.1 vs. uniprot
Match: UPI0011D1D7CA (transcription factor IIIA-like n=4 Tax=Syzygium oleosum TaxID=219896 RepID=UPI0011D1D7CA)

HSP 1 Score: 70.1 bits (170), Expect = 1.060e-9
Identity = 28/53 (52.83%), Postives = 37/53 (69.81%), Query Frame = 0 
Query:  413 CTVAGCGKLFTMRKNLLKHIKVIHEKERPFACRYAVCARPFAYKHVRDKHEKT 465
            C V GC ++F+ + NL +H+K +H + RPF C Y  C + FAYKHVRD HEKT
Sbjct:  171 CDVEGCLRIFSTKSNLRQHVKAVHLEVRPFVCSYKDCGKKFAYKHVRDHHEKT 223
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BLAST of mRNA_P-wetherbeei_contig1227.4.1 vs. uniprot
Match: UPI0011D2B336 (transcription factor IIIA-like n=1 Tax=Syzygium oleosum TaxID=219896 RepID=UPI0011D2B336)

HSP 1 Score: 70.1 bits (170), Expect = 2.950e-9
Identity = 28/53 (52.83%), Postives = 37/53 (69.81%), Query Frame = 0 
Query:  413 CTVAGCGKLFTMRKNLLKHIKVIHEKERPFACRYAVCARPFAYKHVRDKHEKT 465
            C V GC ++F+ + NL +H+K +H + RPF C Y  C + FAYKHVRD HEKT
Sbjct:  257 CDVEGCLRIFSTKSNLRQHVKAVHLEVRPFVCSYKDCGKKFAYKHVRDHHEKT 309
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BLAST of mRNA_P-wetherbeei_contig1227.4.1 vs. uniprot
Match: A0A059CTW7_EUCGR (Uncharacterized protein n=2 Tax=Eucalyptus grandis TaxID=71139 RepID=A0A059CTW7_EUCGR)

HSP 1 Score: 69.7 bits (169), Expect = 3.120e-9
Identity = 29/53 (54.72%), Postives = 37/53 (69.81%), Query Frame = 0 
Query:  413 CTVAGCGKLFTMRKNLLKHIKVIHEKERPFACRYAVCARPFAYKHVRDKHEKT 465
            C V GC  +F+ + NL +H+K +H + RPF C Y  C + FAYKHVRDKHEKT
Sbjct:  257 CDVEGCLCVFSTKSNLRQHVKAVHLEVRPFVCGYKDCGKKFAYKHVRDKHEKT 309
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BLAST of mRNA_P-wetherbeei_contig1227.4.1 vs. uniprot
Match: UPI000B776670 (transcription factor IIIA-like isoform X2 n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=UPI000B776670)

HSP 1 Score: 69.3 bits (168), Expect = 3.180e-9
Identity = 31/71 (43.66%), Postives = 44/71 (61.97%), Query Frame = 0 
Query:  406 QQLPSVV-CTVAGCGKLFTMRKNLLKHIKVIHEKERPFACRYAVCARPFAYKHVRDKHEKT-----IHGGL 470
            + LP+++ CT  GC   FT + N+ +H+K +H K RPF C +  C   FA+KHVRD HEK+     +HG L
Sbjct:  194 EHLPTILKCTFEGCDHSFTTKSNMQQHVKAVHLKLRPFVCSFTGCGMRFAFKHVRDNHEKSARHVYVHGDL 264
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BLAST of mRNA_P-wetherbeei_contig1227.4.1 vs. uniprot
Match: W9RZD5_9ROSA (Transcription factor IIIA n=1 Tax=Morus notabilis TaxID=981085 RepID=W9RZD5_9ROSA)

HSP 1 Score: 69.7 bits (169), Expect = 3.220e-9
Identity = 29/56 (51.79%), Postives = 37/56 (66.07%), Query Frame = 0 
Query:  410 SVVCTVAGCGKLFTMRKNLLKHIKVIHEKERPFACRYAVCARPFAYKHVRDKHEKT 465
            S+ C   GC   F+ + NL +H+K  H K++PFAC +A C   FAYKHVRD HEKT
Sbjct:  245 SIKCNFKGCDHTFSTKSNLNQHVKAAHLKQKPFACGFAGCGMRFAYKHVRDNHEKT 300
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BLAST of mRNA_P-wetherbeei_contig1227.4.1 vs. uniprot
Match: A0A0K9RZG0_SPIOL (C2H2-type domain-containing protein n=4 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9RZG0_SPIOL)

HSP 1 Score: 66.2 bits (160), Expect = 3.900e-9
Identity = 31/71 (43.66%), Postives = 43/71 (60.56%), Query Frame = 0 
Query:  406 QQLPSVV-CTVAGCGKLFTMRKNLLKHIKVIHEKERPFACRYAVCARPFAYKHVRDKHEKT-----IHGGL 470
            + LP+V+ C+  GC   FT + N+ +H+K +H + RPF C    C   FA+KHVRD HEKT     +HG L
Sbjct:   44 EHLPTVLKCSFEGCDHSFTTKSNMQQHVKAVHLQLRPFICSIPGCGMKFAFKHVRDNHEKTGRHVHVHGDL 114
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BLAST of mRNA_P-wetherbeei_contig1227.4.1 vs. uniprot
Match: A0A803LT92_CHEQI (Uncharacterized protein n=3 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803LT92_CHEQI)

HSP 1 Score: 69.3 bits (168), Expect = 4.510e-9
Identity = 31/71 (43.66%), Postives = 44/71 (61.97%), Query Frame = 0 
Query:  406 QQLPSVV-CTVAGCGKLFTMRKNLLKHIKVIHEKERPFACRYAVCARPFAYKHVRDKHEKT-----IHGGL 470
            + LP+++ CT  GC   FT + N+ +H+K +H K RPF C +  C   FA+KHVRD HEK+     +HG L
Sbjct:  244 EHLPTILKCTFEGCDHSFTTKSNMQQHVKAVHLKLRPFVCSFTGCGMRFAFKHVRDNHEKSARHVYVHGDL 314
[Close]
BLAST of mRNA_P-wetherbeei_contig1227.4.1 vs. uniprot
Match: UPI0010AB1AF7 (transcription factor IIIA-like isoform X2 n=3 Tax=Maleae TaxID=721813 RepID=UPI0010AB1AF7)

HSP 1 Score: 68.6 bits (166), Expect = 5.750e-9
Identity = 27/55 (49.09%), Postives = 36/55 (65.45%), Query Frame = 0 
Query:  411 VVCTVAGCGKLFTMRKNLLKHIKVIHEKERPFACRYAVCARPFAYKHVRDKHEKT 465
            + C   GC + FT + NL KH+K +H + +PF C ++ C   FAYKHVRD HEKT
Sbjct:  205 IKCDYKGCLRTFTTKSNLYKHVKAVHLEHKPFVCSFSGCGMRFAYKHVRDNHEKT 259
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BLAST of mRNA_P-wetherbeei_contig1227.4.1 vs. uniprot
Match: A0A8B8PSC8_9MYRT (transcription factor IIIA isoform X1 n=3 Tax=Rhodamnia argentea TaxID=178133 RepID=A0A8B8PSC8_9MYRT)

HSP 1 Score: 68.6 bits (166), Expect = 7.340e-9
Identity = 28/53 (52.83%), Postives = 36/53 (67.92%), Query Frame = 0 
Query:  413 CTVAGCGKLFTMRKNLLKHIKVIHEKERPFACRYAVCARPFAYKHVRDKHEKT 465
            C V GC  +F+ + NL +H+K +H + RPF C Y  C + FAYKHVRD HEKT
Sbjct:  255 CDVEGCLHVFSTKSNLRQHVKAVHLEVRPFVCGYKNCGKKFAYKHVRDNHEKT 307
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1227.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835QR79_VANPL4.990e-1054.39Uncharacterized protein n=2 Tax=Vanilla planifolia... [more]
UPI0011D1D7CA1.060e-952.83transcription factor IIIA-like n=4 Tax=Syzygium ol... [more]
UPI0011D2B3362.950e-952.83transcription factor IIIA-like n=1 Tax=Syzygium ol... [more]
A0A059CTW7_EUCGR3.120e-954.72Uncharacterized protein n=2 Tax=Eucalyptus grandis... [more]
UPI000B7766703.180e-943.66transcription factor IIIA-like isoform X2 n=1 Tax=... [more]
W9RZD5_9ROSA3.220e-951.79Transcription factor IIIA n=1 Tax=Morus notabilis ... [more]
A0A0K9RZG0_SPIOL3.900e-943.66C2H2-type domain-containing protein n=4 Tax=Spinac... [more]
A0A803LT92_CHEQI4.510e-943.66Uncharacterized protein n=3 Tax=Chenopodium quinoa... [more]
UPI0010AB1AF75.750e-949.09transcription factor IIIA-like isoform X2 n=3 Tax=... [more]
A0A8B8PSC8_9MYRT7.340e-952.83transcription factor IIIA isoform X1 n=3 Tax=Rhoda... [more]

Pages

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 173..197
e-value: 5.1E-5
score: 32.7
coord: 442..467
e-value: 42.0
score: 7.8
coord: 411..436
e-value: 0.0087
score: 25.3
coord: 222..242
e-value: 200.0
score: 1.7
coord: 52..77
e-value: 0.0017
score: 27.6
coord: 244..267
e-value: 3.3
score: 16.7
coord: 145..165
e-value: 72.0
score: 5.7
coord: 23..47
e-value: 0.01
score: 25.1
IPR013087Zinc finger C2H2-typePFAMPF00096zf-C2H2coord: 173..197
e-value: 1.1E-4
score: 22.4
coord: 23..47
e-value: 0.002
score: 18.5
coord: 412..436
e-value: 0.014
score: 15.8
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 25..47
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 444..467
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 54..77
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 175..197
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 413..436
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 246..267
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 23..52
score: 11.031986
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 442..472
score: 10.304577
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 52..82
score: 10.616323
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 173..202
score: 10.844938
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 411..441
score: 13.151861
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 50..86
e-value: 1.5E-6
score: 29.8
coord: 438..479
e-value: 1.5E-5
score: 26.5
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 5..49
e-value: 9.9E-9
score: 36.8
NoneNo IPR availableGENE3D3.30.160.60Classic Zinc Fingercoord: 413..437
e-value: 9.0E-6
score: 27.4
coord: 174..200
e-value: 6.3E-8
score: 34.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 323..340
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 466..489
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 293..378
NoneNo IPR availablePANTHERPTHR46179ZINC FINGER PROTEINcoord: 147..267
coord: 3..86
coord: 411..471
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 48..86
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 145..197
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 412..445
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 9..49

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1227contigP-wetherbeei_contig1227:4971..6874 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1227.4.1mRNA_P-wetherbeei_contig1227.4.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig1227 4799..7622 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig1227.4.1 ID=prot_P-wetherbeei_contig1227.4.1|Name=mRNA_P-wetherbeei_contig1227.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=509bp
MAFDKPAKLKRHVDSVHLKVRPFACERPGCGLAYARKDHLVRHMESHNGR
SFKCTEPGCASAFNDKSHLNRHIEDQHLRAKRYICGCLVSVAPADAALAE
GGASAEEGGAAAEGGAAAGEEAAAEGAAEGGAAAAAGEATAPSFRLCGAG
FNLKNQLRQHVQDIHGAADIDIHRCPEPGCGKGFSTPSRLQRHRATHGRQ
YLCAVFVSALAPGDGNGGGGGSICGQIFQTQAEIDKHTAECHLPQCGVCG
RPFATVAKRNHHVKTKHCHVVVCAAVAATRANVVDAVGAAGAGTRSGDDD
EEAEWPAAGGGGCGFGDGGEDGFGGEDGGEDGEDGSESGGQENEGDSGDG
GDEGNGGLFDSGGGGDGDLFDSGDGDVSLANSGVGDGGLADGGGVVPGAG
VAAAPQQLPSVVCTVAGCGKLFTMRKNLLKHIKVIHEKERPFACRYAVCA
RPFAYKHVRDKHEKTIHGGLAPSANDGDSGGGGGGGGNASGSIGGKNAAG
GDAAGGRM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf