prot_P-wetherbeei_contig11884.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig11884.1.1
Unique Nameprot_P-wetherbeei_contig11884.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length123
Homology
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BLAST of mRNA_P-wetherbeei_contig11884.1.1 vs. uniprot
Match: A0A6H5JVF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVF4_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 7.400e-10
Identity = 35/77 (45.45%), Postives = 47/77 (61.04%), Query Frame = 0 
Query:    1 VRRGDLDAVRHALEAPGGAALEEKSGQFWCTPLLEACRFRQARVATLLLDAGARVDACGGGRYTALHCACDGPADGA 77
            +RRG+L  V+  L+  G   +E   G+F  T L EACRFR  +V  LLL+ GA  +  GGG +T LH AC+GP  G+
Sbjct:   22 IRRGNLAEVKRFLDEGGN--VETVGGRFHSTLLTEACRFRATKVIELLLERGAAANVSGGGCWTPLHYACNGPCRGS 96
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BLAST of mRNA_P-wetherbeei_contig11884.1.1 vs. uniprot
Match: D7FQI7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQI7_ECTSI)

HSP 1 Score: 64.3 bits (155), Expect = 1.000e-9
Identity = 35/76 (46.05%), Postives = 46/76 (60.53%), Query Frame = 0 
Query:    1 VRRGDLDAVRHALEAPGGAALEEKSGQFWCTPLLEACRFRQARVATLLLDAGARVDACGGGRYTALHCACDGPADG 76
            +RRG+L  V+  L+  G   +E   G+F  T L EACRFR  +V  LLL+ GA  +  GGG +T LH AC+GP  G
Sbjct:   19 IRRGNLAEVKRFLDEGGN--VETVGGRFHSTLLTEACRFRATKVIDLLLERGAAANVSGGGFWTPLHYACNGPCRG 92
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11884.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JVF4_9PHAE7.400e-1045.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQI7_ECTSI1.000e-946.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 28..57
e-value: 1.2
score: 18.2
coord: 61..94
e-value: 0.71
score: 18.9
coord: 98..123
e-value: 280.0
score: 9.1
IPR002110Ankyrin repeatPFAMPF13637Ank_4coord: 79..119
e-value: 2.0E-8
score: 34.6
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 98..123
score: 11.11353
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..67
e-value: 1.8E-11
score: 45.6
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 68..123
e-value: 1.4E-13
score: 52.9
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 3..123
NoneNo IPR availablePANTHERPTHR24171ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATEDcoord: 64..123
coord: 3..95
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 98..123
score: 11.08139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11884contigP-wetherbeei_contig11884:161..529 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11884.1.1mRNA_P-wetherbeei_contig11884.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig11884 161..529 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig11884.1.1 ID=prot_P-wetherbeei_contig11884.1.1|Name=mRNA_P-wetherbeei_contig11884.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=123bp
VRRGDLDAVRHALEAPGGAALEEKSGQFWCTPLLEACRFRQARVATLLLD
AGARVDACGGGRYTALHCACDGPADGAGTELVVLLLERGADADAVDHFGR
TPLHFACKTGAFESALVLLQGGA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf