prot_P-wetherbeei_contig11626.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig11626.1.1
Unique Nameprot_P-wetherbeei_contig11626.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length212
Homology
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BLAST of mRNA_P-wetherbeei_contig11626.1.1 vs. uniprot
Match: D7FZM3_ECTSI (HABP4_PAI-RBP1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZM3_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 2.860e-20
Identity = 72/176 (40.91%), Postives = 91/176 (51.70%), Query Frame = 0 
Query:    1 MKKSGGGGHNWGTEVEAEAPSAT---------DAAGGWGGAVEAPEAPAGPVDALA--AATEVGPAAEEEAXXXXXXXXXXXXXVVTMEEYEAEKAAKRGELDELVGSVSIKTVDRSEFGDMPALKKTDIEEKDFMGGKGAKKAKAKTQQRTKERFVDVGFRAPPVERPSGGRGEG 165
            +KKSGGGG NWG +  A   +A          D   GWG    A      P+       AT+ G + +E+               +T++E++A   AK  EL +++G VSIKTVD SEF D     K D+EE+ FMGGK  K  K KTQQR KE F DVGFRAP +   SGG G G
Sbjct:  200 IKKSGGGGRNWGNDAAAGMDNAAANAENEAEGDQGAGWGANGSAAPNAEDPMTETGDGQATDGGESPKEDTPAPRVPEPEPEEIQLTLDEHQAMLDAKAKELADMIGEVSIKTVDDSEFNDGAIRNKQDVEEEGFMGGKATKTRKVKTQQRAKEVFQDVGFRAPAMN--SGGDGRG 373
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11626.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FZM3_ECTSI2.860e-2040.91HABP4_PAI-RBP1 domain-containing protein n=2 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 77..97
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..212
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..83
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..83
IPR006861Hyaluronan/mRNA-binding proteinPFAMPF04774HABP4_PAI-RBP1coord: 1..92
e-value: 2.5E-7
score: 31.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11626contigP-wetherbeei_contig11626:374..2020 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11626.1.1mRNA_P-wetherbeei_contig11626.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig11626 374..2029 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig11626.1.1 ID=prot_P-wetherbeei_contig11626.1.1|Name=mRNA_P-wetherbeei_contig11626.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=212bp
MKKSGGGGHNWGTEVEAEAPSATDAAGGWGGAVEAPEAPAGPVDALAAAT
EVGPAAEEEAAAEPEAEPEPKEEVVTMEEYEAEKAAKRGELDELVGSVSI
KTVDRSEFGDMPALKKTDIEEKDFMGGKGAKKAKAKTQQRTKERFVDVGF
RAPPVERPSGGRGEGRGFRGGRGGEGGRGGGRGFRGGRGEGRGYGGGGGG
YGGVGGYGGGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006861HABP4_PAIRBP1-bd