prot_P-wetherbeei_contig11311.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig11311.1.1
Unique Nameprot_P-wetherbeei_contig11311.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length137
Homology
BLAST of mRNA_P-wetherbeei_contig11311.1.1 vs. uniprot
Match: D8LFE0_ECTSI (DNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFE0_ECTSI)

HSP 1 Score: 135 bits (339), Expect = 4.450e-34
Identity = 68/129 (52.71%), Postives = 93/129 (72.09%), Query Frame = 0
Query:    9 VRQGFSDEFLDKAYNEFKDKVLCAKPNYCLVSPALVPDVWIAPEVVWEVQGADLSVSPVHMAAVGKV--DPNKGISIRFPRLLRERSPDDKDPSQATTADEIVHFYKSQDVIKNNAGNGNDGGNSDDDF 135
            +  GF+DE L+  + E K+  +  +P Y  V+ +L PDVW+AP  VWEV+ ADLS SPVH AA+GK+  +P++GISIRFPRLLRER  +DKDP QATT+D+I+  Y+ QDV+K+NA  G     +DDD+
Sbjct:  915 IGTGFTDEILNSFWEELKEHTVEQRPRYYNVADSLSPDVWLAPHKVWEVKCADLSKSPVHKAAIGKIAQEPDRGISIRFPRLLRER--EDKDPEQATTSDQILDMYEGQDVVKSNAAGGQANNAADDDW 1041          
BLAST of mRNA_P-wetherbeei_contig11311.1.1 vs. uniprot
Match: A0A0B7N1E0_9FUNG (DNA ligase n=1 Tax=Parasitella parasitica TaxID=35722 RepID=A0A0B7N1E0_9FUNG)

HSP 1 Score: 122 bits (307), Expect = 8.770e-30
Identity = 66/118 (55.93%), Postives = 80/118 (67.80%), Query Frame = 0
Query:    9 VRQGFSDEFLDKAYNEFKDKVLCA-KPNYCLVSPALVPDVWIAPEVVWEVQGADLSVSPVHMAAVGKVDPNKGISIRFPRLLRERSPDDKDPSQATTADEIVHFYKSQDVIKNNAGNG 125
            +  GFSDE L   Y+  K+ V+ A KP YCL   A+ PDVW AP  VWEV+ ADLSVSP +MA VG+VDPNKGIS+RFPR +R R  DDKDP  ATT++++  FY  Q    N  GNG
Sbjct:  670 IGTGFSDENLQLFYDTLKNHVIDAPKPYYCLGENAVKPDVWFAPSQVWEVKSADLSVSPRYMAGVGRVDPNKGISLRFPRFIRVR--DDKDPENATTSEQVSEFYFDQ---ANQQGNG 782          
BLAST of mRNA_P-wetherbeei_contig11311.1.1 vs. uniprot
Match: A0A812ZKQ6_9DINO (Lig1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812ZKQ6_9DINO)

HSP 1 Score: 115 bits (288), Expect = 1.110e-29
Identity = 69/132 (52.27%), Postives = 86/132 (65.15%), Query Frame = 0
Query:    9 VRQGFSDEFLDKAYNEFKD-KVLCAKPNYCLVSP-ALVPDVWIAPEVVWEVQGADLSVSPVHMAAVGKVDPNKGISIRFPRLLRERSPDDKDPSQATTADEIVHFYKSQDVIKNNAGNGNDGGN--SDDDFL 136
            V  GFSDEFL +A   FKD + +  KP   +V P +LVPDVW+ P  VWEV+ ADLS+SP + AAVG VDP KGI++RFPR LR R  DDK+P  AT +++I   Y+ Q     N G+G  GG   SDDD L
Sbjct:   74 VGTGFSDEFLAEATKFFKDNEYVREKPPMNVVPPTSLVPDVWLEPAQVWEVKAADLSISPAYRAAVGHVDPAKGIALRFPRFLRIR--DDKNPEHATNSEQIAQMYRDQ----GNVGSGGAGGGHVSDDDML 199          
BLAST of mRNA_P-wetherbeei_contig11311.1.1 vs. uniprot
Match: A0A2B4RKL2_STYPI (DNA ligase n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4RKL2_STYPI)

HSP 1 Score: 122 bits (306), Expect = 1.240e-29
Identity = 61/114 (53.51%), Postives = 75/114 (65.79%), Query Frame = 0
Query:    9 VRQGFSDEFLDKAYNEFKDKVLCAKPNYCLVSPALVPDVWIAPEVVWEVQGADLSVSPVHMAAVGKVDPNKGISIRFPRLLRERSPDDKDPSQATTADEIVHFYKSQDVIKNNA 122
            +  GF+DE LDK Y  FKD+V+     Y      L PD W  P  VWE++ ADLSVSPVH AA+G VDP KGIS+RFPR LR R  DDK P QAT + ++   Y+SQ+ +KNNA
Sbjct:  912 IGTGFTDELLDKHYQFFKDQVIPHPKAYYRYDDNLAPDHWFVPVQVWEIRAADLSVSPVHKAALGLVDPVKGISLRFPRFLRIR--DDKKPEQATDSSQVAEMYRSQETVKNNA 1023          
BLAST of mRNA_P-wetherbeei_contig11311.1.1 vs. uniprot
Match: A0A3M6TY89_POCDA (DNA ligase n=3 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6TY89_POCDA)

HSP 1 Score: 121 bits (304), Expect = 2.310e-29
Identity = 61/114 (53.51%), Postives = 75/114 (65.79%), Query Frame = 0
Query:    9 VRQGFSDEFLDKAYNEFKDKVLCAKPNYCLVSPALVPDVWIAPEVVWEVQGADLSVSPVHMAAVGKVDPNKGISIRFPRLLRERSPDDKDPSQATTADEIVHFYKSQDVIKNNA 122
            +  GF+DE LDK Y  FKD+V+     Y      L PD W  P  VWE++ ADLSVSPVH AA+G VDP KGIS+RFPR LR R  DDK P QAT + ++   Y+SQ+ +KNNA
Sbjct:  932 IGTGFTDELLDKHYQFFKDQVIPHPKAYYRYDDNLAPDHWFDPVQVWEIRAADLSVSPVHKAALGLVDPVKGISLRFPRFLRIR--DDKKPEQATDSSQVAEMYRSQETVKNNA 1043          
BLAST of mRNA_P-wetherbeei_contig11311.1.1 vs. uniprot
Match: A0A836CMS0_9STRA (DNA ligase (ATP) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMS0_9STRA)

HSP 1 Score: 121 bits (303), Expect = 2.600e-29
Identity = 65/113 (57.52%), Postives = 78/113 (69.03%), Query Frame = 0
Query:    9 VRQGFSDEFLDKAYNEFKDKVLCAKPNYCLVSPALVPDVWIAPEVVWEVQGADLSVSPVHMAAVGKVDPNKGISIRFPRLLRERSPDDKDPSQATTADEIVHFYKSQDVIKNN 121
            +  GFS+E L       K  V+  KP+Y  V   + PDVW+ P  VWEV+ ADLS SPVH AAVGKVDP +GISIRFPRL+RER  DDK P  AT+AD+I+  Y+SQD IKNN
Sbjct:  521 IGTGFSNERLLALDAMLKAHVIERKPSYFNVGDTIEPDVWLEPCKVWEVRAADLSKSPVHKAAVGKVDPVRGISIRFPRLVRER--DDKAPESATSADQILDMYRSQDCIKNN 631          
BLAST of mRNA_P-wetherbeei_contig11311.1.1 vs. uniprot
Match: A0A8H7RME4_9FUNG (DNA ligase n=1 Tax=Mucor plumbeus TaxID=97098 RepID=A0A8H7RME4_9FUNG)

HSP 1 Score: 119 bits (297), Expect = 1.960e-28
Identity = 68/129 (52.71%), Postives = 84/129 (65.12%), Query Frame = 0
Query:    9 VRQGFSDEFLDKAYNEFKDKVLCA-KPNYCLVSPALVPDVWIAPEVVWEVQGADLSVSPVHMAAVGKVDPNKGISIRFPRLLRERSPDDKDPSQATTADEIVHFYKSQDVIKNNAGNGNDGGNSDDDFL 136
            +  GFSDE L   Y+  KD V+ A K  YCL   A+ PD+W AP  VWEV+ ADLSVSP +MA VG+VDPNKGIS+RFPR +R R  DDKDP  AT++++I  FY  Q    N  GNG    N+D D+ 
Sbjct:  664 IGTGFSDENLQLFYDTLKDHVIDAPKQYYCLGENAVKPDIWFAPTQVWEVKCADLSVSPRYMAGVGRVDPNKGISLRFPRFIRVR--DDKDPDNATSSEQISEFYFDQ---ANQQGNGK---NNDMDYY 784          
BLAST of mRNA_P-wetherbeei_contig11311.1.1 vs. uniprot
Match: UPI0009E2AB7B (DNA ligase 1-like isoform X1 n=2 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E2AB7B)

HSP 1 Score: 118 bits (295), Expect = 3.770e-28
Identity = 58/113 (51.33%), Postives = 73/113 (64.60%), Query Frame = 0
Query:    9 VRQGFSDEFLDKAYNEFKDKVLCAKPNYCLVSPALVPDVWIAPEVVWEVQGADLSVSPVHMAAVGKVDPNKGISIRFPRLLRERSPDDKDPSQATTADEIVHFYKSQDVIKNN 121
            +  GF+DE LDK +  FKD V+     Y     +L PD W     VWE++ ADLS+SPVH AAVG VDP KGIS+RFPR LR R  DDK P QAT + ++   Y+SQ+ +KNN
Sbjct:  961 IGTGFTDELLDKHHQFFKDHVISQPKAYYRYDDSLAPDHWFDAVQVWEIRAADLSISPVHKAAVGLVDPVKGISLRFPRFLRTR--DDKKPEQATDSSQVAEMYRSQETVKNN 1071          
BLAST of mRNA_P-wetherbeei_contig11311.1.1 vs. uniprot
Match: S2J5T4_MUCC1 (DNA ligase n=4 Tax=Mucor TaxID=4830 RepID=S2J5T4_MUCC1)

HSP 1 Score: 117 bits (293), Expect = 6.770e-28
Identity = 62/117 (52.99%), Postives = 79/117 (67.52%), Query Frame = 0
Query:    9 VRQGFSDEFLDKAYNEFKDKVLCA-KPNYCLVSPALVPDVWIAPEVVWEVQGADLSVSPVHMAAVGKVDPNKGISIRFPRLLRERSPDDKDPSQATTADEIVHFYKSQDVIKNNAGN 124
            +  GFSDE L   Y+  KD V+ A K  YCL   A+ PD+W AP  VWEV+ ADLSVSP +MA VG+VDPNKGIS+RFPR +R R  DDKDP  AT+++++  FY  Q   + N+ N
Sbjct:  665 IGTGFSDENLQLFYDTLKDHVIDAPKQYYCLGENAVKPDIWFAPTQVWEVKCADLSVSPRYMAGVGRVDPNKGISLRFPRFIRVR--DDKDPENATSSEQVSEFYFDQANQQGNSKN 779          
BLAST of mRNA_P-wetherbeei_contig11311.1.1 vs. uniprot
Match: A0A835PX35_VANPL (DNA_LIGASE_A3 domain-containing protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835PX35_VANPL)

HSP 1 Score: 115 bits (288), Expect = 7.950e-28
Identity = 58/120 (48.33%), Postives = 78/120 (65.00%), Query Frame = 0
Query:    1 PARALHGTVRQ---GFSDEFLDKAYNEFKDKVLCAKPNYCLVSPALVPDVWIAPEVVWEVQGADLSVSPVHMAAVGKVDPNKGISIRFPRLLRERSPDDKDPSQATTADEIVHFYKSQDV 117
            P  A HG  ++   GFS+  L++     + KV+     Y  VS ++ PDVW  P  VWEV+ ADLS+SPVH AA G VDPNKGIS+RFPRL+R R  DDK+P QAT +D++   Y++Q +
Sbjct:  296 PIAAFHGRGKRTGTGFSELQLEERSESLRSKVIARPKPYYRVSDSMNPDVWFEPAEVWEVKAADLSISPVHRAASGVVDPNKGISLRFPRLVRVR--DDKNPEQATNSDQVAEMYRAQKI 413          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11311.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFE0_ECTSI4.450e-3452.71DNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8L... [more]
A0A0B7N1E0_9FUNG8.770e-3055.93DNA ligase n=1 Tax=Parasitella parasitica TaxID=35... [more]
A0A812ZKQ6_9DINO1.110e-2952.27Lig1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]
A0A2B4RKL2_STYPI1.240e-2953.51DNA ligase n=1 Tax=Stylophora pistillata TaxID=504... [more]
A0A3M6TY89_POCDA2.310e-2953.51DNA ligase n=3 Tax=Pocillopora damicornis TaxID=46... [more]
A0A836CMS0_9STRA2.600e-2957.52DNA ligase (ATP) n=1 Tax=Tribonema minus TaxID=303... [more]
A0A8H7RME4_9FUNG1.960e-2852.71DNA ligase n=1 Tax=Mucor plumbeus TaxID=97098 RepI... [more]
UPI0009E2AB7B3.770e-2851.33DNA ligase 1-like isoform X1 n=2 Tax=Orbicella fav... [more]
S2J5T4_MUCC16.770e-2852.99DNA ligase n=4 Tax=Mucor TaxID=4830 RepID=S2J5T4_M... [more]
A0A835PX35_VANPL7.950e-2848.33DNA_LIGASE_A3 domain-containing protein n=1 Tax=Va... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 5..116
e-value: 1.1E-28
score: 102.1
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 6..115
IPR012309DNA ligase, ATP-dependent, C-terminalPFAMPF04679DNA_ligase_A_Ccoord: 7..93
e-value: 2.7E-11
score: 43.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..107
NoneNo IPR availablePANTHERPTHR45674DNA LIGASE 1/3 FAMILY MEMBERcoord: 11..129
NoneNo IPR availablePANTHERPTHR45674:SF4DNA LIGASE 1coord: 11..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11311contigP-wetherbeei_contig11311:265..1222 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11311.1.1mRNA_P-wetherbeei_contig11311.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig11311 265..1222 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig11311.1.1 ID=prot_P-wetherbeei_contig11311.1.1|Name=mRNA_P-wetherbeei_contig11311.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=137bp
PARALHGTVRQGFSDEFLDKAYNEFKDKVLCAKPNYCLVSPALVPDVWIA
PEVVWEVQGADLSVSPVHMAAVGKVDPNKGISIRFPRLLRERSPDDKDPS
QATTADEIVHFYKSQDVIKNNAGNGNDGGNSDDDFL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold
IPR012309DNA_ligase_ATP-dep_C