prot_P-wetherbeei_contig11291.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig11291.1.1
Unique Nameprot_P-wetherbeei_contig11291.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length55
Homology
BLAST of mRNA_P-wetherbeei_contig11291.1.1 vs. uniprot
Match: W7TQL4_9STRA (Cytochrome b-c1 complex subunit Rieske, mitochondrial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQL4_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 9.470e-12
Identity = 30/45 (66.67%), Postives = 35/45 (77.78%), Query Frame = 0
Query:    3 SQDHYFEKDRIHKGKGDPNKRTFVYFMLGAGRFIYASTARLTFLK 47
            S D+Y+EKD++HK  GDPNKR F YF+LG  RFIYAS ARL  LK
Sbjct:   48 SFDNYYEKDKLHKKPGDPNKRDFTYFVLGGARFIYASAARLVALK 92          
BLAST of mRNA_P-wetherbeei_contig11291.1.1 vs. uniprot
Match: A0A6V1WQS7_HETAK (Cytochrome b-c1 complex subunit Rieske, mitochondrial n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1WQS7_HETAK)

HSP 1 Score: 64.7 bits (156), Expect = 3.440e-11
Identity = 32/46 (69.57%), Postives = 35/46 (76.09%), Query Frame = 0
Query:    2 SSQDHYFEKDRIHKGKGDPNKRTFVYFMLGAGRFIYASTARLTFLK 47
            SSQDHYFEKDR+ KG+   NKR F YFMLG  RFIYAS ARL  +K
Sbjct:   46 SSQDHYFEKDRLAKGE---NKREFTYFMLGCSRFIYASAARLALIK 88          
BLAST of mRNA_P-wetherbeei_contig11291.1.1 vs. uniprot
Match: D7FK16_ECTSI (Cytochrome b-c1 complex subunit Rieske, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK16_ECTSI)

HSP 1 Score: 63.9 bits (154), Expect = 8.650e-11
Identity = 31/46 (67.39%), Postives = 36/46 (78.26%), Query Frame = 0
Query:    2 SSQDHYFEKDRIHKGKGDPNKRTFVYFMLGAGRFIYASTARLTFLK 47
            ++QD YFEKDR+   KGDP KR F YFMLGA RF+YAS+ARL  LK
Sbjct:   69 TNQDGYFEKDRV--AKGDPGKREFTYFMLGASRFLYASSARLILLK 112          
BLAST of mRNA_P-wetherbeei_contig11291.1.1 vs. uniprot
Match: A0A836CDL7_9STRA (Cytochrome b-c1 complex subunit Rieske, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDL7_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 1.470e-6
Identity = 25/47 (53.19%), Postives = 32/47 (68.09%), Query Frame = 0
Query:    1 FSSQDHYFEKDRIHKGKGDPNKRTFVYFMLGAGRFIYASTARLTFLK 47
            F SQD  FEKDR+  G    N + F YF+LG GRF+YASTAR+  ++
Sbjct:   57 FDSQDGAFEKDRVEPGT---NHKEFTYFLLGGGRFVYASTARVILIQ 100          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11291.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
W7TQL4_9STRA9.470e-1266.67Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
A0A6V1WQS7_HETAK3.440e-1169.57Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
D7FK16_ECTSI8.650e-1167.39Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
A0A836CDL7_9STRA1.470e-653.19Cytochrome b-c1 complex subunit Rieske, mitochondr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSUPERFAMILY81502ISP transmembrane anchorcoord: 10..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11291contigP-wetherbeei_contig11291:1976..2140 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11291.1.1mRNA_P-wetherbeei_contig11291.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig11291 1976..2140 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig11291.1.1 ID=prot_P-wetherbeei_contig11291.1.1|Name=mRNA_P-wetherbeei_contig11291.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=55bp
FSSQDHYFEKDRIHKGKGDPNKRTFVYFMLGAGRFIYASTARLTFLKVRR
REEII
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