prot_P-wetherbeei_contig11290.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig11290.1.1
Unique Nameprot_P-wetherbeei_contig11290.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length527
Homology
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BLAST of mRNA_P-wetherbeei_contig11290.1.1 vs. uniprot
Match: A0A835YYQ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYQ9_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 1.520e-16
Identity = 61/150 (40.67%), Postives = 84/150 (56.00%), Query Frame = 0 
Query:   10 DKLFELTVKFVGTAGVSILKARPLASRFTAIEGSRSTP-RVVFGSLVLENKTQALPLDYRFALQAC--GPVKE--VSRRLSGMRPGSAQLLVLAAEQGRLSPAGTDGSTVAVRYCCIFKRFFGLFRHTILIEN--LSSPISDGARRAAAV 152
            DKLFELTVKFVGTAGVSI++A P  S+F  ++ S        +G   LEN ++ALPLDYR  +Q C  G   E  + + L  M PG+A+LLV+  + G + P     + VA++YC + K   GL    I  +    SS ++ G    A V
Sbjct:  764 DKLFELTVKFVGTAGVSIMRAAPTQSKFAVLKCSEGRGITTAYGQFQLENGSKALPLDYRLPMQRCIDGAFTEEGIDQALLSMLPGTAELLVVGTDTGTIPP----NTKVALKYCILSKGKLGLIHSRIKADQSAASSGLTVGTEGGAPV 909
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11290.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YYQ9_9STRA1.520e-1640.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11290contigP-wetherbeei_contig11290:48..1628 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11290.1.1mRNA_P-wetherbeei_contig11290.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig11290 48..1628 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig11290.1.1 ID=prot_P-wetherbeei_contig11290.1.1|Name=mRNA_P-wetherbeei_contig11290.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=527bp
MQRLVPREQDKLFELTVKFVGTAGVSILKARPLASRFTAIEGSRSTPRVV
FGSLVLENKTQALPLDYRFALQACGPVKEVSRRLSGMRPGSAQLLVLAAE
QGRLSPAGTDGSTVAVRYCCIFKRFFGLFRHTILIENLSSPISDGARRAA
AVAHTVRVFVDDGTMRIDLPADPLDDAGKAAPDDGRLRDEREALAPPLET
LRVAAPIFVRPMAARSGGGGGEAAAGGGGKGGGGKGGVDGQAAAAAAAAA
ATEIGSGAAAVPAVTPTAVIVRRSSIGRIASVEDTDAATAAGTGGAGGVA
ATIVCATLPRPLGPKATVAGIPKVEATTTVASASGDAAAAAAGRPRKAAS
GASAAASSPTAVGLEWRQVTVVNQLQRPLVLYPYSNLPFSVSVVGAGGQR
QAPGPALCLMSGDDTTAAVAAAVPVAGWDGTGQALHACGRGFEVRPGCPV
MLQIVPRPGAATGPLPLDAVKLGQVVSFEGIVALAHPSGGSPRTTPIPAL
IDLTGAPAAAAGPGGGGVVVDRANLAA
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