prot_P-wetherbeei_contig11271.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig11271.1.1
Unique Nameprot_P-wetherbeei_contig11271.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length288
Homology
BLAST of mRNA_P-wetherbeei_contig11271.1.1 vs. uniprot
Match: A0A2R5F3V4_9PROT (Small ribosomal subunit biogenesis GTPase RsgA n=1 Tax=Novimethylophilus kurashikiensis TaxID=1825523 RepID=A0A2R5F3V4_9PROT)

HSP 1 Score: 347 bits (891), Expect = 2.130e-117
Identity = 168/281 (59.79%), Postives = 218/281 (77.58%), Query Frame = 0
Query:    8 QPGTVVASFGRQFTVELADSTLIACVTRGKRTDIACGDRVAIAMTAPDQGVIESTAPRVSLFYRSDIQREKLIAANVTQIVIVLASSPPFHAELLDRCLAAAEEAGIPALLALNKMDLPAAAQALQSLERYRALGYDVLPLAAKIDIAPLRARLAGHTSVLVGQSGMGKSTIINRLLPDAAARVGELSVALGGGRHTTTHARLYHLDAASHIIDSPGLQEFGLVHVAPEDLAHAFIEFRPHLGQCKFNDCKHLTEPGCAITAAVERGEIGAQRVESYRKLV 288
            Q G +VA+ G+++ VEL D  +++CVTRGK++++ACGD+V I  T P +GV+E+  PR SL YRS+  R+KL+AANVTQIVIVLA+ P F+ EL+DRCL AAE  GI  L+ LNK DLP +A+A+  L  Y+ LGY+VLPL+AK DIAPL   L G TSVLVGQSGMGKSTI+N LLPDA AR GE+S AL  G+HTTT ARLYHLDAAS +IDSPGLQEFGL H+ P+ + +AF+EFRP+LG+C+F+DC+H +EPGCA+  A+E G +   R+  Y +L+
Sbjct:    3 QHGLIVAAHGKRYDVELHDGVIVSCVTRGKKSELACGDKVEIKPTGPGEGVVENFLPRSSLLYRSNEFRKKLLAANVTQIVIVLAAKPSFYPELVDRCLVAAESEGIRPLIVLNKADLPESAEAMARLSLYQRLGYEVLPLSAKQDIAPLLPHLHGQTSVLVGQSGMGKSTIVNALLPDAQARTGEISSALDSGKHTTTAARLYHLDAASQLIDSPGLQEFGLAHITPDQIEYAFLEFRPYLGKCRFSDCRHRSEPGCAVHEAIEAGAVTTGRLSCYHQLI 283          
BLAST of mRNA_P-wetherbeei_contig11271.1.1 vs. uniprot
Match: A0A1F4DW51_9PROT (Small ribosomal subunit biogenesis GTPase RsgA n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13 TaxID=1797495 RepID=A0A1F4DW51_9PROT)

HSP 1 Score: 346 bits (888), Expect = 1.020e-116
Identity = 171/278 (61.51%), Postives = 216/278 (77.70%), Query Frame = 0
Query:   10 GTVVASFGRQFTVELADSTLIACVTRGKRTDIACGDRVAIAMTAPDQGVIESTAPRVSLFYRSDIQREKLIAANVTQIVIVLASSPPFHAELLDRCLAAAEEAGIPALLALNKMDLPAAAQALQSLERYRALGYDVLPLAAKIDIAPLRARLAGHTSVLVGQSGMGKSTIINRLLPDAAARVGELSVALGGGRHTTTHARLYHLDAASHIIDSPGLQEFGLVHVAPEDLAHAFIEFRPHLGQCKFNDCKHLTEPGCAITAAVERGEIGAQRVESYRKL 287
            G+++AS+GR++ VE  D+T++ CVTRGKR  +ACGDRV++A + P QGVIE+ APR +L YRSD  R+KLIAANVTQ +IV+A++P FH +L++RCL AAE  G+ AL+ LNK DLP +A AL+SLE YR LGY VL L+A+ D+ PL   L G  +VLVG SGMGKSTIINRLLP AAAR  ++S AL  GRHTTTHARLYHLDAASHIIDSPG+QEFGL  +  ++ AHAF+EFRP LG+C+F DC+HL+EP CAI +A     I  +R+ SYR L
Sbjct:   15 GSIIASYGRRYLVEFPDATVLDCVTRGKRGALACGDRVSVAPSGPGQGVIEAAAPRTTLLYRSDAFRQKLIAANVTQSIIVVAAAPSFHEDLVNRCLVAAEHGGMAALIVLNKTDLPESAAALESLELYRRLGYRVLALSARRDVRPLVPLLRGQVTVLVGPSGMGKSTIINRLLPHAAARTDDVSRALNSGRHTTTHARLYHLDAASHIIDSPGMQEFGLHQLTIDEAAHAFVEFRPWLGRCRFRDCRHLSEPDCAIASACAENRISERRLASYRSL 292          
BLAST of mRNA_P-wetherbeei_contig11271.1.1 vs. uniprot
Match: A0A658BTC0_9PROT (Small ribosomal subunit biogenesis GTPase RsgA n=1 Tax=Nitrosomonadales bacterium TaxID=2026761 RepID=A0A658BTC0_9PROT)

HSP 1 Score: 345 bits (885), Expect = 2.140e-116
Identity = 179/280 (63.93%), Postives = 213/280 (76.07%), Query Frame = 0
Query:   10 GTVVASFGRQFTVELADSTLIACVTRGKRTDIACGDRVAIAMTAPDQGVIESTAPRVSLFYRSDIQREKLIAANVTQIVIVLASSPPFHAELLDRCLAAAEEAGIPALLALNKMDLPA-AAQALQSLERYRALGYDVLPLAAKIDIAPLRARLAGHTSVLVGQSGMGKSTIINRLLPDAAARVGELSVALGGGRHTTTHARLYHLDAASHIIDSPGLQEFGLVHVAPEDLAHAFIEFRPHLGQCKFNDCKHLTEPGCAITAAVERGEIGAQRVESYRKLV 288
            G + AS+GRQFTVELAD  LIACVTRGK+   ACGD+V I  T PDQGVIE+  PR SL YRSD  REK+IAANVTQI+IVLA+ P F+ +L++RCLAAAE   I AL+ LNK DL +  AQAL+ L  YR LGY +L L+A  D +PL   L G TSVLVGQSGMGKS+IIN LLP A A   E+S  L  G+HTTTHARLYHLD  SHIIDSPGLQEFGL H+ PE++ HAFIEFRP LG+CKFN+C+HL+EPGCA+ AA   G I  +R+ +Y+KL+
Sbjct:   11 GQITASYGRQFTVELADGRLIACVTRGKKGGAACGDKVRIKPTGPDQGVIEAILPRQSLLYRSDAFREKIIAANVTQIIIVLAAVPSFYEDLVNRCLAAAESTKIKALIVLNKADLQSETAQALEKLALYRDLGYPILTLSAHQDTSPLIPFLQGETSVLVGQSGMGKSSIINSLLPGAEADTREISTTLDSGKHTTTHARLYHLDPDSHIIDSPGLQEFGLHHLKPEEIDHAFIEFRPFLGKCKFNNCRHLSEPGCAVLAAAMAGHIQPRRLAAYQKLM 290          
BLAST of mRNA_P-wetherbeei_contig11271.1.1 vs. uniprot
Match: A0A6F8VD01_9PROT (Small ribosomal subunit biogenesis GTPase RsgA n=1 Tax=Sulfurimicrobium lacus TaxID=2715678 RepID=A0A6F8VD01_9PROT)

HSP 1 Score: 341 bits (875), Expect = 5.960e-115
Identity = 174/280 (62.14%), Postives = 214/280 (76.43%), Query Frame = 0
Query:   10 GTVVASFGRQFTVELADSTLIACVTRGKRTDIACGDRVAIAMTAPDQGVIESTAPRVSLFYRSDIQREKLIAANVTQIVIVLASSPPFHAELLDRCLAAAEEAGIPALLALNKMDLPA-AAQALQSLERYRALGYDVLPLAAKIDIAPLRARLAGHTSVLVGQSGMGKSTIINRLLPDAAARVGELSVALGGGRHTTTHARLYHLDAASHIIDSPGLQEFGLVHVAPEDLAHAFIEFRPHLGQCKFNDCKHLTEPGCAITAAVERGEIGAQRVESYRKLV 288
            G ++A++GRQFTVEL D   + CVTRGK++  ACGDRV IA+T+PDQGVIE+  PR SL YRSD  REK+IAANVTQI+IVLA+ P F+ +L++RCL AAE A I AL+ LNK DL A  A+A+++L+ YR LGY +L L A  DIAPLR  L G TSVLVGQSGMGKS+IIN L P       E+S  L  G+HTTT A++YHLD  SHIIDSPGLQEFGL H+ PE++ HAFIEFRP+LGQCKFN+C H +EPGCA+ AAVE G I  +R+ ++ KLV
Sbjct:    7 GQIIAAYGRQFTVELPDGKHVTCVTRGKKSGAACGDRVRIALTSPDQGVIEAIQPRQSLLYRSDAFREKIIAANVTQIIIVLAAVPSFYEDLVNRCLVAAEAAKIKALIVLNKADLVAETARAMETLQPYRNLGYPLLTLCAHSDIAPLRPFLEGETSVLVGQSGMGKSSIINALFPGINLETREISKTLDSGKHTTTFAKIYHLDPDSHIIDSPGLQEFGLHHLKPEEIDHAFIEFRPYLGQCKFNNCHHRSEPGCAVLAAVEAGSIHRRRLAAFHKLV 286          
BLAST of mRNA_P-wetherbeei_contig11271.1.1 vs. uniprot
Match: A0A0S8C6P1_9PROT (Small ribosomal subunit biogenesis GTPase RsgA n=1 Tax=Betaproteobacteria bacterium SG8_41 TaxID=1703391 RepID=A0A0S8C6P1_9PROT)

HSP 1 Score: 341 bits (874), Expect = 1.190e-114
Identity = 172/288 (59.72%), Postives = 216/288 (75.00%), Query Frame = 0
Query:    1 KKTAAPTQPGTVVASFGRQFTVELADSTLIACVTRGKRTDIACGDRVAIAMTAPDQGVIESTAPRVSLFYRSDIQREKLIAANVTQIVIVLASSPPFHAELLDRCLAAAEEAGIPALLALNKMDLPAAAQALQSLERYRALGYDVLPLAAKIDIAPLRARLAGHTSVLVGQSGMGKSTIINRLLPDAAARVGELSVALGGGRHTTTHARLYHLDAASHIIDSPGLQEFGLVHVAPEDLAHAFIEFRPHLGQCKFNDCKHLTEPGCAITAAVERGEIGAQRVESYRKLV 288
            KK +     G +VASFGR++ VEL D T + CVTRG+R  +ACGDRV +A + P QGVIE    R +L YRSD  R+KLIAANVTQIV+V+A  P FH +L++RCLAAAE  G+ +L+ LNKMDLP A +AL+SL  Y  LGY ++ L+AK D++ L A L G TS LVGQSGMGKSTI+N L P+AA R+ E+S AL  GRHTTTHARLYHL   +HIIDSPGLQEFGL H+   +LA AF+EFRP LG+C+F DC H++EPGCA+TAA   G+I  +R+ESYR+L+
Sbjct:    6 KKASLALLDGQIVASFGRRYLVELQDGTTLDCVTRGRRGALACGDRVGVARSGPGQGVIEKLGARDTLLYRSDRVRQKLIAANVTQIVVVVAPVPTFHEDLINRCLAAAEHGGMSSLIVLNKMDLPQAKRALKSLALYEQLGYRIVALSAKRDVSQLLAFLRGETSALVGQSGMGKSTIVNALAPEAAVRIAEISAALDSGRHTTTHARLYHLGHDTHIIDSPGLQEFGLHHLDMGELADAFVEFRPWLGRCRFRDCHHMSEPGCALTAACVAGKISERRLESYRQLL 293          
BLAST of mRNA_P-wetherbeei_contig11271.1.1 vs. uniprot
Match: UPI001BBECE3D (Ribosome small subunit-dependent GTPase A n=1 Tax=Sulfuricella sp. TaxID=2099377 RepID=UPI001BBECE3D)

HSP 1 Score: 337 bits (864), Expect = 2.430e-113
Identity = 170/279 (60.93%), Postives = 212/279 (75.99%), Query Frame = 0
Query:   10 GTVVASFGRQFTVELADSTLIACVTRGKRTDIACGDRVAIAMTAPDQGVIESTAPRVSLFYRSDIQREKLIAANVTQIVIVLASSPPFHAELLDRCLAAAEEAGIPALLALNKMDLP-AAAQALQSLERYRALGYDVLPLAAKIDIAPLRARLAGHTSVLVGQSGMGKSTIINRLLPDAAARVGELSVALGGGRHTTTHARLYHLDAASHIIDSPGLQEFGLVHVAPEDLAHAFIEFRPHLGQCKFNDCKHLTEPGCAITAAVERGEIGAQRVESYRKL 287
            G VVA+FGRQF VELAD T + C+TRGK+  +ACGDRV +   +  QG+I++ APR SL YRSD  REK+IAANVTQI++VLA+ P F+ +LL+RCL AAE A I AL+ LNK DL   + QALQ L  Y  LGY +LPL+A  DIAPLR  L G TSVLVGQSGMGKS+I+N LLPD  AR  E+S AL  G+HTTTHA+LYHLDA SHIIDSPGLQEFGL H++ + + HAF+EFRP++G C+F +CKHL EP CA+  AV  G+I  +R+ +Y++L
Sbjct:    4 GQVVAAFGRQFLVELADGTTLPCITRGKKGGVACGDRVIVQSISASQGIIDTIAPRTSLLYRSDAFREKIIAANVTQIIVVLAAEPAFYEDLLNRCLIAAETADIKALIVLNKCDLENPSQQALQQLALYAELGYPLLPLSALQDIAPLRPWLHGQTSVLVGQSGMGKSSIVNALLPDIQARTREISQALNSGKHTTTHAQLYHLDADSHIIDSPGLQEFGLHHMSRDAITHAFVEFRPYIGDCRFANCKHLVEPDCAVRNAVATGKISERRLAAYQRL 282          
BLAST of mRNA_P-wetherbeei_contig11271.1.1 vs. uniprot
Match: A0A1A9NPW7_9PROT (Small ribosomal subunit biogenesis GTPase RsgA n=1 Tax=Methylobacillus sp. MM3 TaxID=1848039 RepID=A0A1A9NPW7_9PROT)

HSP 1 Score: 333 bits (853), Expect = 1.720e-111
Identity = 166/277 (59.93%), Postives = 217/277 (78.34%), Query Frame = 0
Query:   12 VVASFGRQFTVELADSTLIACVTRGKRTDIACGDRVAIAMTAPDQGVIESTAPRVSLFYRSDIQREKLIAANVTQIVIVLASSPPFHAELLDRCLAAAEEAGIPALLALNKMDLPAAAQALQSLERYRALGYDVLPLAAKIDIAPLRARLAGHTSVLVGQSGMGKSTIINRLLPDAAARVGELSVALGGGRHTTTHARLYHLDAASHIIDSPGLQEFGLVHVAPEDLAHAFIEFRPHLGQCKFNDCKHLTEPGCAITAAVERGEIGAQRVESYRKLV 288
            VVASFG+++ VEL + T I+CVTRGK++D+ACGDRV I MT+ ++GV+E   PR SL YRS+  R+KL+AANVTQI+IV+A+ P F+ +L++RCL AAE AGI AL+ LNK DLP  + AL+ LE Y++LGY V  L+AK D + LR+ L G TSVLVGQSGMGKST++N LLP+A +R  E+S  L  G+HTTT ARLYHLD+AS +IDSPGLQEFGL H+  +++ HAFIEFRP+LG+C+FN+C+H  EP CAI  AV  G+I   R+ESY+KL+
Sbjct:   16 VVASFGKRYDVELENGTQISCVTRGKKSDLACGDRVEIHMTSVNEGVVEDILPRSSLLYRSNEYRKKLLAANVTQIIIVIAAEPSFYEDLVNRCLIAAEAAGIRALILLNKSDLPETSAALKRLELYQSLGYPVQALSAKQDASQLRSWLQGQTSVLVGQSGMGKSTLVNALLPEAKSRTQEISAVLDSGKHTTTSARLYHLDSASSLIDSPGLQEFGLNHLTSDEMEHAFIEFRPYLGKCRFNNCRHHKEPDCAILNAVRDGKISQIRLESYQKLL 292          
BLAST of mRNA_P-wetherbeei_contig11271.1.1 vs. uniprot
Match: A0A4R3YAH1_9PROT (Small ribosomal subunit biogenesis GTPase RsgA n=2 Tax=Sulfurirhabdus autotrophica TaxID=1706046 RepID=A0A4R3YAH1_9PROT)

HSP 1 Score: 332 bits (852), Expect = 1.980e-111
Identity = 170/280 (60.71%), Postives = 210/280 (75.00%), Query Frame = 0
Query:   10 GTVVASFGRQFTVELADSTLIACVTRGKRTDIACGDRVAIAMTAPDQGVIESTAPRVSLFYRSDIQREKLIAANVTQIVIVLASSPPFHAELLDRCLAAAEEAGIPALLALNKMDLPAAA-QALQSLERYRALGYDVLPLAAKIDIAPLRARLAGHTSVLVGQSGMGKSTIINRLLPDAAARVGELSVALGGGRHTTTHARLYHLDAASHIIDSPGLQEFGLVHVAPEDLAHAFIEFRPHLGQCKFNDCKHLTEPGCAITAAVERGEIGAQRVESYRKLV 288
            G VVA++GR++ VEL    LI+CV RGK+  +ACGDRV I  +  +QG IE  APR SL YRSD    K+IAANVTQI+IV A+ P F+ ELL+RCLAAAE   I AL+ LNK DL   + QAL +L+ YR LGY+VL L+AK DI+PL+  L GHTSVLVGQSGMGKS+IIN LLP+A     E+S AL  GRHTTTH RLYHLD  S IIDSPGLQEFGL H++P ++ HAFIEFRP+LG CKFN+C H++EPGCA+  A+E+ EI  +R+ +Y KL+
Sbjct:    4 GQVVANYGRRYEVELDSGKLISCVMRGKKGGVACGDRVFITPSGTEQGAIERIAPRASLLYRSDTFHTKIIAANVTQIIIVAAAVPSFYEELLNRCLAAAEANNIKALIVLNKCDLSEESKQALNNLQLYRDLGYEVLQLSAKQDISPLKPYLKGHTSVLVGQSGMGKSSIINALLPEARVVTAEISEALDSGRHTTTHTRLYHLDEQSQIIDSPGLQEFGLHHLSPTEIDHAFIEFRPYLGHCKFNNCLHISEPGCALLEALEKCEISKRRISAYHKLI 283          
BLAST of mRNA_P-wetherbeei_contig11271.1.1 vs. uniprot
Match: UPI0019AA1BA0 (Ribosome small subunit-dependent GTPase A n=1 Tax=Prolixibacteraceae bacterium TaxID=2053594 RepID=UPI0019AA1BA0)

HSP 1 Score: 332 bits (851), Expect = 3.700e-111
Identity = 169/280 (60.36%), Postives = 209/280 (74.64%), Query Frame = 0
Query:   10 GTVVASFGRQFTVELADSTLIACVTRGKRTDIACGDRVAIAMTAPDQGVIESTAPRVSLFYRSDIQREKLIAANVTQIVIVLASSPPFHAELLDRCLAAAEEAGIPALLALNKMDLPA-AAQALQSLERYRALGYDVLPLAAKIDIAPLRARLAGHTSVLVGQSGMGKSTIINRLLPDAAARVGELSVALGGGRHTTTHARLYHLDAASHIIDSPGLQEFGLVHVAPEDLAHAFIEFRPHLGQCKFNDCKHLTEPGCAITAAVERGEIGAQRVESYRKLV 288
            G VV +FGRQ+ VELA   ++ C  RGKR+ +ACGDRV +A TAP QGV+E+  PR +L YRSD  R+KLIAANVTQIVIVLA  P F+ ELL+RC+AAAE   +  ++ LNK DL   +A A+  L  Y  LGY V+PL+AK DI+PLR  L+G  SVL+GQSGMGKSTIIN L+P A A   E+S AL  GRHTTTHARLYHLDA + +IDSPG+QEFGL H+  +D+A AFIEFRP LG C+F++C+HL EPGCAI  +   G I A+R+E+YRKLV
Sbjct:   10 GLVVGTFGRQYLVELAGPEILTCFPRGKRSTLACGDRVEVARTAPGQGVVEAIDPRSALLYRSDQFRQKLIAANVTQIVIVLAVVPSFYEELLNRCMAAAENQRLSLVIVLNKFDLAGESAAAMDRLALYSDLGYRVIPLSAKRDISPLRPALSGQVSVLIGQSGMGKSTIINALIPGAGATTAEISAALDSGRHTTTHARLYHLDAGADLIDSPGMQEFGLHHLTQQDIAEAFIEFRPLLGHCRFHNCRHLVEPGCAIAQSEAEGSIDARRLEAYRKLV 289          
BLAST of mRNA_P-wetherbeei_contig11271.1.1 vs. uniprot
Match: A0A1F4AJB8_9PROT (Small ribosomal subunit biogenesis GTPase RsgA n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_64_14 TaxID=1797482 RepID=A0A1F4AJB8_9PROT)

HSP 1 Score: 330 bits (845), Expect = 2.720e-110
Identity = 168/278 (60.43%), Postives = 202/278 (72.66%), Query Frame = 0
Query:   10 GTVVASFGRQFTVELADSTLIACVTRGKRTDIACGDRVAIAMTAPDQGVIESTAPRVSLFYRSDIQREKLIAANVTQIVIVLASSPPFHAELLDRCLAAAEEAGIPALLALNKMDLPAAAQALQSLERYRALGYDVLPLAAKIDIAPLRARLAGHTSVLVGQSGMGKSTIINRLLPDAAARVGELSVALGGGRHTTTHARLYHLDAASHIIDSPGLQEFGLVHVAPEDLAHAFIEFRPHLGQCKFNDCKHLTEPGCAITAAVERGEIGAQRVESYRKL 287
            G VVASFGR++ VELAD+T++ CVTRG+R D+ACGDRV  + +   QGVIE  APR +L YRSD  REK++ AN TQI IV A+ P F  +L++RCL AAE  G+ ALL LNK DLP  A A  SL+ Y  LGY ++ L AK D+ PL   L    SVLVGQSGMGKSTI+NRL+PDAAARV E+S AL  GRHTTTHARLY L A S IIDSPG+Q FGL H+  +D A AF+EFRP LG C+F DC+HL EPGCA+  A   G+I A R+ SYR+L
Sbjct:    5 GQVVASFGRRYLVELADATILECVTRGRRHDVACGDRVRASRSDARQGVIEEIAPRSTLLYRSDAHREKIVCANATQIAIVAAAVPAFSHDLINRCLIAAEHGGMSALLVLNKSDLPQTAAARASLQEYTDLGYRLVTLCAKRDLRPLLPHLEARASVLVGQSGMGKSTIVNRLVPDAAARVAEISTALNSGRHTTTHARLYRLGATSSIIDSPGMQAFGLHHLGWQDAAQAFLEFRPWLGHCRFRDCRHLVEPGCAVEEAQRAGKITAGRLASYRRL 282          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig11271.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2R5F3V4_9PROT2.130e-11759.79Small ribosomal subunit biogenesis GTPase RsgA n=1... [more]
A0A1F4DW51_9PROT1.020e-11661.51Small ribosomal subunit biogenesis GTPase RsgA n=1... [more]
A0A658BTC0_9PROT2.140e-11663.93Small ribosomal subunit biogenesis GTPase RsgA n=1... [more]
A0A6F8VD01_9PROT5.960e-11562.14Small ribosomal subunit biogenesis GTPase RsgA n=1... [more]
A0A0S8C6P1_9PROT1.190e-11459.72Small ribosomal subunit biogenesis GTPase RsgA n=1... [more]
UPI001BBECE3D2.430e-11360.93Ribosome small subunit-dependent GTPase A n=1 Tax=... [more]
A0A1A9NPW7_9PROT1.720e-11159.93Small ribosomal subunit biogenesis GTPase RsgA n=1... [more]
A0A4R3YAH1_9PROT1.980e-11160.71Small ribosomal subunit biogenesis GTPase RsgA n=2... [more]
UPI0019AA1BA03.700e-11160.36Ribosome small subunit-dependent GTPase A n=1 Tax=... [more]
A0A1F4AJB8_9PROT2.720e-11060.43Small ribosomal subunit biogenesis GTPase RsgA n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010914RsgA GTPase domainPFAMPF03193RsgA_GTPasecoord: 64..230
e-value: 1.7E-47
score: 161.4
IPR010914RsgA GTPase domainPROSITEPS50936ENGC_GTPASEcoord: 82..226
score: 34.333794
NoneNo IPR availableGENE3D1.10.40.50Probable gtpase engc; domain 3coord: 231..288
e-value: 2.8E-22
score: 80.2
NoneNo IPR availablePIRSRPIRSR038134-2PIRSR038134-2coord: 165..234
e-value: 2.8E-4
score: 17.8
NoneNo IPR availablePIRSRPIRSR006230-1PIRSR006230-1coord: 168..225
e-value: 0.0014
score: 15.8
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 5..63
e-value: 4.9E-11
score: 43.8
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 9..65
IPR004881Ribosome biogenesis GTPase RsgATIGRFAMTIGR00157TIGR00157coord: 43..287
e-value: 1.0E-62
score: 209.8
IPR004881Ribosome biogenesis GTPase RsgAPANTHERPTHR32120SMALL RIBOSOMAL SUBUNIT BIOGENESIS GTPASE RSGAcoord: 6..287
IPR004881Ribosome biogenesis GTPase RsgAHAMAPMF_01820GTPase_RsgAcoord: 8..288
score: 31.382751
IPR004881Ribosome biogenesis GTPase RsgACDDcd01854YjeQ_EngCcoord: 82..287
e-value: 3.40391E-107
score: 308.173
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 65..230
e-value: 1.6E-43
score: 150.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 77..287
IPR030378Circularly permuted (CP)-type guanine nucleotide-binding (G) domainPROSITEPS51721G_CPcoord: 72..228
score: 40.29641

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig11271contigP-wetherbeei_contig11271:2..865 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig11271.1.1mRNA_P-wetherbeei_contig11271.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig11271 2..865 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig11271.1.1 ID=prot_P-wetherbeei_contig11271.1.1|Name=mRNA_P-wetherbeei_contig11271.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=288bp
KKTAAPTQPGTVVASFGRQFTVELADSTLIACVTRGKRTDIACGDRVAIA
MTAPDQGVIESTAPRVSLFYRSDIQREKLIAANVTQIVIVLASSPPFHAE
LLDRCLAAAEEAGIPALLALNKMDLPAAAQALQSLERYRALGYDVLPLAA
KIDIAPLRARLAGHTSVLVGQSGMGKSTIINRLLPDAAARVGELSVALGG
GRHTTTHARLYHLDAASHIIDSPGLQEFGLVHVAPEDLAHAFIEFRPHLG
QCKFNDCKHLTEPGCAITAAVERGEIGAQRVESYRKLV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010914RsgA_GTPase_dom
IPR012340NA-bd_OB-fold
IPR004881Ribosome_biogen_GTPase_RsgA
IPR027417P-loop_NTPase
IPR030378G_CP_dom