prot_P-wetherbeei_contig10933.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig10933.1.1
Unique Nameprot_P-wetherbeei_contig10933.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length116
Homology
BLAST of mRNA_P-wetherbeei_contig10933.1.1 vs. uniprot
Match: A0A7X9AFF1_9BURK (Ribosomal silencing factor RsfS n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X9AFF1_9BURK)

HSP 1 Score: 139 bits (350), Expect = 2.700e-40
Identity = 61/106 (57.55%), Postives = 82/106 (77.36%), Query Frame = 0
Query:    1 MARAAAEVADDKLGRDIIVKDLTDLSIVCDYFVITSAPTRVQTKDIARSIEERLKGAGQASKRTQGFREGSWILMDYGVIVVHIFLQSEREFYDLEGLWRDAPLVH 106
            +AR  A++ D+K+  D++V DL ++SI+CDYFV+ SAPTR+QT+ +AR I+E L   G   K  QG  EG+WILMDYGVIVVH+F+  EREFYDLEGLWR+A +V+
Sbjct:   12 LARRIADLCDEKMTNDVVVLDLQNVSILCDYFVLASAPTRIQTRKVARDIDEMLSAEGLQPKSIQGMPEGAWILMDYGVIVVHLFMDREREFYDLEGLWREAAVVY 117          
BLAST of mRNA_P-wetherbeei_contig10933.1.1 vs. uniprot
Match: A0A7Z9UD74_9BACT (Ribosomal silencing factor RsfS n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9UD74_9BACT)

HSP 1 Score: 129 bits (323), Expect = 2.480e-36
Identity = 57/105 (54.29%), Postives = 78/105 (74.29%), Query Frame = 0
Query:    1 MARAAAEVADDKLGRDIIVKDLTDLSIVCDYFVITSAPTRVQTKDIARSIEERLKGAGQASKRTQGFREGSWILMDYGVIVVHIFLQSEREFYDLEGLWRDAPLV 105
            +A+ AA+ A +    D+++ D+ D++ VCDYFVI SAPTR+QTKDIAR +E+ L+  G A  R QG  E SWIL+DYG++V+H+FL  EREFYDLEG W DA ++
Sbjct:    6 IAKIAAQTAHEVKADDVLILDVRDMTTVCDYFVIASAPTRIQTKDIARKMEQALEIEGVAKSRIQGRDEASWILLDYGMVVLHVFLTQEREFYDLEGRWSDAEII 110          
BLAST of mRNA_P-wetherbeei_contig10933.1.1 vs. uniprot
Match: F6B8Q1_DESCC (Ribosomal silencing factor RsfS n=1 Tax=Desulfotomaculum nigrificans (strain DSM 14880 / VKM B-2319 / CO-1-SRB) TaxID=868595 RepID=F6B8Q1_DESCC)

HSP 1 Score: 119 bits (298), Expect = 1.560e-32
Identity = 53/107 (49.53%), Postives = 77/107 (71.96%), Query Frame = 0
Query:    5 AAEVADDKLGRDIIVKDLTDLSIVCDYFVITSAPTRVQTKDIARSIEERLKGAGQASKRTQGFREGSWILMDYGVIVVHIFLQSEREFYDLEGLWRDAPLVHMDFQA 111
            A + ADDK  +DI V D++ +SI+CDYF+I +  +R Q + +A  IEE+L+ AG    R +GFREG+WIL+DYG +VVH+F + ER+FY+LE LW DA +V +  +A
Sbjct:   12 AHQAADDKKAKDITVLDISHISIICDYFLICTGGSRTQVQSVAEHIEEKLEEAGVKPLRKEGFREGTWILLDYGDVVVHVFQEMERDFYNLERLWGDAQVVEISAKA 118          
BLAST of mRNA_P-wetherbeei_contig10933.1.1 vs. uniprot
Match: A0A2N2DKM5_9FIRM (Ribosomal silencing factor RsfS n=1 Tax=Firmicutes bacterium HGW-Firmicutes-14 TaxID=2013775 RepID=A0A2N2DKM5_9FIRM)

HSP 1 Score: 116 bits (291), Expect = 1.610e-31
Identity = 51/107 (47.66%), Postives = 75/107 (70.09%), Query Frame = 0
Query:    1 MARAAAEVADDKLGRDIIVKDLTDLSIVCDYFVITSAPTRVQTKDIARSIEERLKGAGQASKRTQGFREGSWILMDYGVIVVHIFLQSEREFYDLEGLWRDAPLVHM 107
            +A  AA  A++K  +D+I+ D+ D+S VCDYFVI S  +  Q K IA +IE++LK  G    R +GF++  W+L+DYG +VVH+F + +REFY+LE LW DA +VH+
Sbjct:    8 VAAGAARAAEEKKAKDVILLDIHDISTVCDYFVICSGMSSTQVKAIAENIEKKLKEHGVMKLRMEGFKDAHWVLLDYGSVVVHVFREDDREFYNLEHLWGDARVVHL 114          
BLAST of mRNA_P-wetherbeei_contig10933.1.1 vs. uniprot
Match: A0A355TP36_9BACT (Ribosomal silencing factor RsfS n=1 Tax=bacterium UBP9_UBA11836 TaxID=2060920 RepID=A0A355TP36_9BACT)

HSP 1 Score: 117 bits (293), Expect = 1.660e-31
Identity = 51/106 (48.11%), Postives = 74/106 (69.81%), Query Frame = 0
Query:    1 MARAAAEVADDKLGRDIIVKDLTDLSIVCDYFVITSAPTRVQTKDIARSIEERLKGAGQASKRTQGFREGSWILMDYGVIVVHIFLQSEREFYDLEGLWRDAPLVH 106
            MA+A A+V   KLG+D +V D++  S++CDYFVI  APTR Q +DIA +I++ L   G   K  QG  + +W LMDY  ++VH+F+  ER FY+LEG+W+ AP+V+
Sbjct:   21 MAKAIADVCYQKLGKDTVVLDMSKDSVLCDYFVICDAPTRNQLRDIAENIDKMLSEQGIEPKSIQGKNDNAWTLMDYSSVIVHLFISGERSFYNLEGMWKSAPIVY 126          
BLAST of mRNA_P-wetherbeei_contig10933.1.1 vs. uniprot
Match: A0A2N2A2H8_9FIRM (Ribosomal silencing factor RsfS n=1 Tax=Firmicutes bacterium HGW-Firmicutes-8 TaxID=2013789 RepID=A0A2N2A2H8_9FIRM)

HSP 1 Score: 115 bits (289), Expect = 3.240e-31
Identity = 48/107 (44.86%), Postives = 74/107 (69.16%), Query Frame = 0
Query:    1 MARAAAEVADDKLGRDIIVKDLTDLSIVCDYFVITSAPTRVQTKDIARSIEERLKGAGQASKRTQGFREGSWILMDYGVIVVHIFLQSEREFYDLEGLWRDAPLVHM 107
            +A   A  A+DK  +D+++ D++D+S+VCDYFVI S  +  Q K IA ++E +L+  G    R +GF++G W+L+DYG +V HIF + +R FY+LE LW DA +VH+
Sbjct:    8 VASLVAAAAEDKKAKDVLILDISDVSVVCDYFVICSGLSTTQVKAIAENVETKLEEQGMKKLRVEGFKDGHWVLLDYGSVVAHIFQEDDRHFYNLEHLWGDARVVHL 114          
BLAST of mRNA_P-wetherbeei_contig10933.1.1 vs. uniprot
Match: UPI001F50C2B0 (ribosome silencing factor n=1 Tax=Acidibacillus sp. S0AB TaxID=2005001 RepID=UPI001F50C2B0)

HSP 1 Score: 115 bits (288), Expect = 4.880e-31
Identity = 50/106 (47.17%), Postives = 75/106 (70.75%), Query Frame = 0
Query:    2 ARAAAEVADDKLGRDIIVKDLTDLSIVCDYFVITSAPTRVQTKDIARSIEERLKGAGQASKRTQGFREGSWILMDYGVIVVHIFLQSEREFYDLEGLWRDAPLVHM 107
            A+ AA+ A+DK   D+++ D+ +LSI+ DYFVI SA +R Q + IA SIEE ++  G   + T+G R+G W+L+D+G ++VH+F + ER F+DLE LW DAP + M
Sbjct:    9 AKLAADAAEDKKANDVVILDIRELSIIADYFVICSANSRTQAQAIADSIEEHMELRGVKMRGTEGHRDGKWVLLDFGDVIVHVFQEEERRFFDLERLWGDAPRLSM 114          
BLAST of mRNA_P-wetherbeei_contig10933.1.1 vs. uniprot
Match: UPI001957FF84 (ribosome silencing factor n=1 Tax=Desulforadius tongensis TaxID=1216062 RepID=UPI001957FF84)

HSP 1 Score: 115 bits (288), Expect = 5.170e-31
Identity = 50/106 (47.17%), Postives = 73/106 (68.87%), Query Frame = 0
Query:    1 MARAAAEVADDKLGRDIIVKDLTDLSIVCDYFVITSAPTRVQTKDIARSIEERLKGAGQASKRTQGFREGSWILMDYGVIVVHIFLQSEREFYDLEGLWRDAPLVH 106
            M   A   A++K   DI+V D++ +S++CDYF+I SA +  Q K IA +I++++   G A K  +G REG+W+L+DYG +VVHIF + ER FY+LE LW DA +VH
Sbjct:    8 MVDEACRAAEEKKAHDIVVLDISGVSVICDYFIICSANSTTQVKAIAENIQDKMARQGVALKHREGLREGNWVLLDYGDVVVHIFREKERHFYNLERLWGDAEVVH 113          
BLAST of mRNA_P-wetherbeei_contig10933.1.1 vs. uniprot
Match: A0A1M6WTN2_9FIRM (Ribosomal silencing factor RsfS n=1 Tax=Desulforamulus aeronauticus DSM 10349 TaxID=1121421 RepID=A0A1M6WTN2_9FIRM)

HSP 1 Score: 113 bits (282), Expect = 4.220e-30
Identity = 52/103 (50.49%), Postives = 73/103 (70.87%), Query Frame = 0
Query:    5 AAEVADDKLGRDIIVKDLTDLSIVCDYFVITSAPTRVQTKDIARSIEERLKGAGQASKRTQGFREGSWILMDYGVIVVHIFLQSEREFYDLEGLWRDAPLVHM 107
            A + AD+K   DI V D++ LSI+CDYF+I +  +  Q + +A  I+++L+ AG    R +GFREGSWIL+DYG +V+HIF Q EREFY+LE LW DA +V +
Sbjct:   12 AHQAADEKKATDITVLDISHLSIICDYFLICTGRSSTQVQAVANHIKDQLEEAGVKPLRVEGFREGSWILIDYGDVVIHIFQQLEREFYNLERLWGDANVVEL 114          
BLAST of mRNA_P-wetherbeei_contig10933.1.1 vs. uniprot
Match: A0A6N8B682_9FIRM (Ribosomal silencing factor RsfS n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A6N8B682_9FIRM)

HSP 1 Score: 113 bits (282), Expect = 4.220e-30
Identity = 52/106 (49.06%), Postives = 71/106 (66.98%), Query Frame = 0
Query:    1 MARAAAEVADDKLGRDIIVKDLTDLSIVCDYFVITSAPTRVQTKDIARSIEERLKGAGQASKRTQGFREGSWILMDYGVIVVHIFLQSEREFYDLEGLWRDAPLVH 106
            M  AA   A++K   DIIV D+ D+S++CDYF+I S  +  Q + IA +I +R++  G   KR +G +EG W L+DYG IVVHIF + ER FY+LE LW DA +VH
Sbjct:    8 MVDAAYNAAEEKKAWDIIVLDIGDVSVICDYFIICSGSSNTQVRAIAENIVKRMEEQGVLPKRREGLKEGGWTLLDYGDIVVHIFREEERSFYNLERLWGDAEVVH 113          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10933.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X9AFF1_9BURK2.700e-4057.55Ribosomal silencing factor RsfS n=1 Tax=Burkholder... [more]
A0A7Z9UD74_9BACT2.480e-3654.29Ribosomal silencing factor RsfS n=1 Tax=Phycisphae... [more]
F6B8Q1_DESCC1.560e-3249.53Ribosomal silencing factor RsfS n=1 Tax=Desulfotom... [more]
A0A2N2DKM5_9FIRM1.610e-3147.66Ribosomal silencing factor RsfS n=1 Tax=Firmicutes... [more]
A0A355TP36_9BACT1.660e-3148.11Ribosomal silencing factor RsfS n=1 Tax=bacterium ... [more]
A0A2N2A2H8_9FIRM3.240e-3144.86Ribosomal silencing factor RsfS n=1 Tax=Firmicutes... [more]
UPI001F50C2B04.880e-3147.17ribosome silencing factor n=1 Tax=Acidibacillus sp... [more]
UPI001957FF845.170e-3147.17ribosome silencing factor n=1 Tax=Desulforadius to... [more]
A0A1M6WTN2_9FIRM4.220e-3050.49Ribosomal silencing factor RsfS n=1 Tax=Desulforam... [more]
A0A6N8B682_9FIRM4.220e-3049.06Ribosomal silencing factor RsfS n=1 Tax=Firmicutes... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043519Nucleotidyltransferase superfamilyGENE3D3.30.460.10Beta Polymerase, domain 2coord: 1..103
e-value: 7.2E-29
score: 102.0
IPR043519Nucleotidyltransferase superfamilySUPERFAMILY81301Nucleotidyltransferasecoord: 2..109
NoneNo IPR availablePFAMPF02410RsfScoord: 5..99
e-value: 9.5E-24
score: 83.7
IPR004394Protein Iojap/ribosomal silencing factor RsfSTIGRFAMTIGR00090TIGR00090coord: 3..99
e-value: 9.5E-29
score: 97.5
IPR004394Protein Iojap/ribosomal silencing factor RsfSPANTHERPTHR21043IOJAP SUPERFAMILY ORTHOLOGcoord: 4..111
IPR004394Protein Iojap/ribosomal silencing factor RsfSHAMAPMF_01477Iojap_RsfScoord: 1..100
score: 19.827618

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10933contigP-wetherbeei_contig10933:108..455 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10933.1.1mRNA_P-wetherbeei_contig10933.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig10933 87..455 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig10933.1.1 ID=prot_P-wetherbeei_contig10933.1.1|Name=mRNA_P-wetherbeei_contig10933.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=116bp
MARAAAEVADDKLGRDIIVKDLTDLSIVCDYFVITSAPTRVQTKDIARSI
EERLKGAGQASKRTQGFREGSWILMDYGVIVVHIFLQSEREFYDLEGLWR
DAPLVHMDFQAKKAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043519NT_sf
IPR004394Iojap/RsfS/C7orf30