prot_P-wetherbeei_contig10504.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig10504.1.1
Unique Nameprot_P-wetherbeei_contig10504.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length211
Homology
BLAST of mRNA_P-wetherbeei_contig10504.1.1 vs. uniprot
Match: D7FWI2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWI2_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 2.220e-13
Identity = 42/85 (49.41%), Postives = 57/85 (67.06%), Query Frame = 0
Query:  104 DMPARVRAHDAYFNALLNMIPPEFVLPHEAAGDEVYNSKFMKNKKNAAPVQVRKEESKKNKRARYDASHSKTVLKLQQEATAAAE 188
            ++ A ++ HD +F+ +L+MIP   VL  +   +  Y SK+MKNKK  AP Q +KEESKKNKRARY A + KT+L+ QQE   A E
Sbjct:  116 ELVATIQEHDEFFSRMLDMIPENLVLRAKEVAESSYASKYMKNKKGEAPKQSKKEESKKNKRARYAADNQKTLLEKQQERAKAGE 200          
BLAST of mRNA_P-wetherbeei_contig10504.1.1 vs. uniprot
Match: K8YSR8_NANGC (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YSR8_NANGC)

HSP 1 Score: 67.8 bits (164), Expect = 1.050e-9
Identity = 33/78 (42.31%), Postives = 54/78 (69.23%), Query Frame = 0
Query:  108 RVRAHDAYFNALLNMIPPEFVLPHEAAGDEVYNSKFMKNKKNAAPVQVRKEESKKNKRARYDASHSKTVLKLQQEATA 185
            R+  ++AYF+ ++N++P E  LP +   D   N+K+ KNK+ AAP Q++KEESK+ K+ ++D ++ KTV +LQ E  A
Sbjct:   12 RLAENNAYFSRMVNLVPAELYLPKDDNNDGEANAKYFKNKRQAAPKQLKKEESKRGKKMKFDPANMKTVTELQTERAA 89          
BLAST of mRNA_P-wetherbeei_contig10504.1.1 vs. uniprot
Match: W7TVJ8_9STRA (RRP14 domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TVJ8_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 2.420e-9
Identity = 32/78 (41.03%), Postives = 54/78 (69.23%), Query Frame = 0
Query:  108 RVRAHDAYFNALLNMIPPEFVLPHEAAGDEVYNSKFMKNKKNAAPVQVRKEESKKNKRARYDASHSKTVLKLQQEATA 185
            R+  ++AYF+ ++N++P E  LP +   +   N+K+ KNK+ AAP Q++KEESK+ K+ ++D ++ KTV +LQ E  A
Sbjct:   50 RLAENNAYFSRMVNLVPAELYLPKDDNNNGEANAKYFKNKRQAAPKQLKKEESKRGKKMKFDPANMKTVTELQTERAA 127          
BLAST of mRNA_P-wetherbeei_contig10504.1.1 vs. uniprot
Match: UPI001B86F1EF (surfeit locus protein 6-domain-containing protein n=1 Tax=Suillus clintonianus TaxID=1904413 RepID=UPI001B86F1EF)

HSP 1 Score: 58.5 bits (140), Expect = 1.370e-6
Identity = 40/87 (45.98%), Postives = 55/87 (63.22%), Query Frame = 0
Query:  101 PMLDMPARVRAHDAYFNALLNMIPPEFVLP---HEAAGDEVYNSKFMKNKKNA-APVQVRKEESKKNKRARYDASHSKTVLKLQQEA 183
            P+  + A V AH+A F ALLN+IP ++ L    H+A  D+   SKF K+KKN  AP Q  KE SKK +R + D ++ K+V+ LQ EA
Sbjct:    5 PIEVLRASVEAHNATFEALLNLIPAKYYLAKDGHDA--DDAVPSKFQKHKKNQKAPKQAAKEASKKARRDKLDPANQKSVIDLQNEA 89          
BLAST of mRNA_P-wetherbeei_contig10504.1.1 vs. uniprot
Match: A0A0C3L255_9AGAM (RRP14 domain-containing protein (Fragment) n=1 Tax=Tulasnella calospora MUT 4182 TaxID=1051891 RepID=A0A0C3L255_9AGAM)

HSP 1 Score: 54.7 bits (130), Expect = 7.210e-6
Identity = 35/84 (41.67%), Postives = 51/84 (60.71%), Query Frame = 0
Query:  107 ARVRAHDAYFNALLNMIPPEFVLPHEAAGDEVYNSKFMKN-KKNAAPVQVRKEESKKNKRARYDASHSKTVLKLQQEATAAAEA 189
            A +  H+A F +LL +IPPEF +  +    E + S+F K+ KK AA  Q  KE +KK KR + D ++ KT+L +QQE  A+  A
Sbjct:   10 ASLEKHNAAFESLLRLIPPEFYI-EQPVNTEQWKSRFQKHTKKEAANKQAVKEATKKAKRQKLDPANHKTILDIQQEGEASKAA 92          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10504.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FWI2_ECTSI2.220e-1349.41Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
K8YSR8_NANGC1.050e-942.31Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
W7TVJ8_9STRA2.420e-941.03RRP14 domain-containing protein n=1 Tax=Nannochlor... [more]
UPI001B86F1EF1.370e-645.98surfeit locus protein 6-domain-containing protein ... [more]
A0A0C3L255_9AGAM7.210e-641.67RRP14 domain-containing protein (Fragment) n=1 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029188Ribosomal RNA-processing protein 14, N-terminalPFAMPF15459RRP14coord: 108..169
e-value: 1.3E-16
score: 60.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..172
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 149..175
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..79
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 187..211

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10504contigP-wetherbeei_contig10504:27..866 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10504.1.1mRNA_P-wetherbeei_contig10504.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig10504 27..866 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig10504.1.1 ID=prot_P-wetherbeei_contig10504.1.1|Name=mRNA_P-wetherbeei_contig10504.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=211bp
TRKVKAPCEDPCTHPTPPSLEEGRGEMPHKKKGAGMVAPDQGQLREADLA
PSDQRKNNARRAGAEAGSTCDSKSSAWDGEVVSKALKRKRGEGSAPNALA
PMLDMPARVRAHDAYFNALLNMIPPEFVLPHEAAGDEVYNSKFMKNKKNA
APVQVRKEESKKNKRARYDASHSKTVLKLQQEATAAAEAVASDDADDGVD
GGGRGGSGGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029188Rrp14_N