prot_P-wetherbeei_contig10498.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig10498.1.1
Unique Nameprot_P-wetherbeei_contig10498.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length139
Homology
BLAST of mRNA_P-wetherbeei_contig10498.1.1 vs. uniprot
Match: A0A835ZDR9_9STRA (Lon protease C-terminal proteolytic domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDR9_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 1.080e-11
Identity = 52/147 (35.37%), Postives = 67/147 (45.58%), Query Frame = 0
Query:    1 SSPGRDGLRYSHLDIALRSGGLPVEELLAELTALWHQLFDNAVAWLPEDCGSWRRHTSANLMALE-------VKAQPIAVGNTLRRHFASTF-SQNWPYLDELLQDAGQFGMGVSGGVEIVPAVARFIHESGEWLLSLDAANAFNSI 139
            S  G  GLRYSHL  ALR+      E  A LT  W Q      A LP+    W+ H +  L  L         K +PI  G  L+R   S + +    +L ELL+  GQ+G+ VS G E      +  +E G W   LD  NAFN +
Sbjct: 1060 SGAGPSGLRYSHLQDALRTSW-GRHEFAAVLTR-WLQAVMREAARLPD--AFWQLHGAGRLTLLAEQQEDGTAKQRPIVCGEVLQRLCTSVYVADRKDFLAELLEPDGQYGVAVSAGAEKAAMAGKLAYELGHWQFMLDLKNAFNMV 1202          
BLAST of mRNA_P-wetherbeei_contig10498.1.1 vs. uniprot
Match: A0A836CGN9_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGN9_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 1.100e-11
Identity = 52/147 (35.37%), Postives = 67/147 (45.58%), Query Frame = 0
Query:    1 SSPGRDGLRYSHLDIALRSGGLPVEELLAELTALWHQLFDNAVAWLPEDCGSWRRHTSANLMALE-------VKAQPIAVGNTLRRHFASTF-SQNWPYLDELLQDAGQFGMGVSGGVEIVPAVARFIHESGEWLLSLDAANAFNSI 139
            S  G  GLRYSHL  ALR+      E  A LT  W Q      A LP+    W+ H +  L  L         K +PI  G  L+R   S + +    +L ELL+  GQ+G+ VS G E      +  +E G W   LD  NAFN +
Sbjct:  336 SGAGLSGLRYSHLQDALRTSW-GRHEFAAVLTR-WLQTVMREAARLPD--AFWQLHGAGRLTPLAEQQEDGTAKQRPIVCGEVLQRLCTSVYVADRKDFLAELLEPDGQYGVAVSAGAEKAAMAGKLAYELGHWQFMLDLKNAFNMV 478          
BLAST of mRNA_P-wetherbeei_contig10498.1.1 vs. uniprot
Match: A0A836CHA2_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHA2_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 1.540e-11
Identity = 49/146 (33.56%), Postives = 71/146 (48.63%), Query Frame = 0
Query:    4 GRDGLRYSHLDIALRSGGLPVEELLAELTALWHQLFDNAVAWLPEDCGSWRRHTSANLMALEV-------KAQPIAVGNTLRRHFAST---FSQNWPYLDELLQDAGQFGMGVSGGVEIVPAVARFIHESGEWLLSLDAANAFNSI 139
            G  GLRYSHL  ALR+     ++ ++     W +L     A +P+D   W+ H +A L  L         K +PIA G  L+R    T     +   +L ELLQ  GQ+G+ VS G E      +  +E G W  ++D  NAFN++
Sbjct: 2495 GPSGLRYSHLQDALRTTW--GKQQMSLTLVRWIELVMRDAARIPDDF--WQLHAAARLTPLTERQADGTPKLRPIACGEVLQRLPVCTSVYVGERKGFLAELLQPDGQYGVAVSAGAEKAALAGKLAYELGHWQFNVDLRNAFNAL 2636          
BLAST of mRNA_P-wetherbeei_contig10498.1.1 vs. uniprot
Match: A0A835Z1Y7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Y7_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 5.140e-6
Identity = 43/119 (36.13%), Postives = 55/119 (46.22%), Query Frame = 0
Query:    1 SSPGRDGLRYSHLDIALRSGGLPVEELLAELTALWHQLFDNAVAWLPEDCGSWRRHTSANLMALE-------VKAQPIAVGNTLRRHFASTF-SQNWPYLDELLQDAGQFGMGVSGGVE 111
            S  G  GLRYSHL  ALR+      E  A LT  W Q      A LP+    W+ H +  L  L         K +PI  G  L+R   S + +    +L ELL+  GQ+G+ VS G E
Sbjct:   29 SGAGPSGLRYSHLQDALRTSW-GRHEFAAVLTR-WLQTVTREAARLPD--AFWQLHGAGRLTPLAEQQEDGTAKQRPIVCGEVLQRLCTSVYVADRKDFLAELLEPDGQYGVAVSAGAE 143          
BLAST of mRNA_P-wetherbeei_contig10498.1.1 vs. uniprot
Match: A0A835YZF6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZF6_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 2.810e-5
Identity = 43/119 (36.13%), Postives = 55/119 (46.22%), Query Frame = 0
Query:    1 SSPGRDGLRYSHLDIALRSGGLPVEELLAELTALWHQLFDNAVAWLPEDCGSWRRHTSANLMALE-------VKAQPIAVGNTLRRHFASTF-SQNWPYLDELLQDAGQFGMGVSGGVE 111
            S  G  GLRYSHL  ALR+      E  A LT  W Q      A LP+    W+ H +  L  L         K +PI  G  L+R   S + +    +L ELL+  GQ+G+ VS G E
Sbjct:  532 SGAGPSGLRYSHLQDALRTSW-GRHEFAAVLTR-WLQTVMREAARLPD--AFWQLHGAGRLTPLAEQQEDGTAKQRPIVCGEVLQRLCTSVYVADRKDFLAELLEPDGQYGVAVSAGAE 646          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10498.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A835ZDR9_9STRA1.080e-1135.37Lon protease C-terminal proteolytic domain-contain... [more]
A0A836CGN9_9STRA1.100e-1135.37Reverse transcriptase domain-containing protein n=... [more]
A0A836CHA2_9STRA1.540e-1133.56Reverse transcriptase domain-containing protein n=... [more]
A0A835Z1Y7_9STRA5.140e-636.13Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YZF6_9STRA2.810e-536.13Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10498contigP-wetherbeei_contig10498:1272..1688 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10498.1.1mRNA_P-wetherbeei_contig10498.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig10498 1272..1688 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig10498.1.1 ID=prot_P-wetherbeei_contig10498.1.1|Name=mRNA_P-wetherbeei_contig10498.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=139bp
SSPGRDGLRYSHLDIALRSGGLPVEELLAELTALWHQLFDNAVAWLPEDC
GSWRRHTSANLMALEVKAQPIAVGNTLRRHFASTFSQNWPYLDELLQDAG
QFGMGVSGGVEIVPAVARFIHESGEWLLSLDAANAFNSI
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