prot_P-wetherbeei_contig10479.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig10479.2.1
Unique Nameprot_P-wetherbeei_contig10479.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length422
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10479.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 348..368
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..114
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 160..176
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 144..176
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 183..206
e-value: 6.8E-5
score: 20.8
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 184..206
e-value: 8.9E-4
score: 19.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 179..213
score: 9.240434
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 171..276
e-value: 8.7E-11
score: 43.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10479contigP-wetherbeei_contig10479:946..2211 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10479.2.1mRNA_P-wetherbeei_contig10479.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig10479 946..2339 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig10479.2.1 ID=prot_P-wetherbeei_contig10479.2.1|Name=mRNA_P-wetherbeei_contig10479.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=422bp
MTESLLFGGFLINQTNSAVSRPDAGAYGALLTDLAKCGDIDGLKQAWAAA
SKALLPTGELKQLPAAAIIRAYGARIRALRKEQQEQPQQGKGPCVDESHQ
AETSEDAAPRGGLGATLAGRREAVLLRDAEAVFQASMATSRAAAGAAAEG
SGKNNNTKSDSSSVRHRPDADKVAPASEDSTLHNAIIYAYCQAGRLDKAL
AVLKTLIDDPRRSPNPYACTGLVRNLANDGQPFAALRLLAEFERRGIGIV
PTRGLYRSVALACIRDAEALSAAGAAANRGKSRPGAAAAAMSAAKDVEVK
VVTAEPSVAAENEDDSAALAGLRHQRRRQGTTGGRGGCALRARSSLVTEV
LRQRLDDAAEALDAMERHNLGPVSPIVSRHLLRVAADAAEPRHAERCIVR
LRAAGHDVTSADLARVAHAQTA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf