prot_P-wetherbeei_contig10432.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig10432.1.1
Unique Nameprot_P-wetherbeei_contig10432.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length312
Homology
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BLAST of mRNA_P-wetherbeei_contig10432.1.1 vs. uniprot
Match: A0A015M465_RHIIW (DUF659 domain-containing protein n=2 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A015M465_RHIIW)

HSP 1 Score: 57.8 bits (138), Expect = 1.280e-5
Identity = 44/149 (29.53%), Postives = 69/149 (46.31%), Query Frame = 0 
Query:   13 KYRHILDLRCQMHAFNLLYSSFFRHPVPKSIMRTVQQMVMFVRTSHEVGELVRQKARELSKKSRALKTSNKTRFTFGEASLSSIAELEDVLQNDYGDASALFQHKPERVAILSDRWRDFWRQLRKFLKLLLPISKVITMVQSDECTLAD 161
            KY  I  +RC  H  NL+      H     ++R V  +  F RTSH  G  +R+   E   K   LK+   TR+T    S++S+  L+ VL+    +   L  +   ++ I   + R+F+  L     +L P+ K I  ++S   TLAD
Sbjct:  247 KYPKIESVRCISHCINLIACDIVSHNSADRLLRRVNILTTFFRTSHMAGGKLRKLIEESGIKGGGLKSYCVTRWTTSSESVNSVLNLKPVLEKMANEYENLLTNHRIKLII---QGRNFFSDLEILAFVLNPLRKAILSLESRSATLAD 392
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10432.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A015M465_RHIIW1.280e-529.53DUF659 domain-containing protein n=2 Tax=Rhizophag... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 229..253
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 18..218

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10432contigP-wetherbeei_contig10432:584..1699 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10432.1.1mRNA_P-wetherbeei_contig10432.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig10432 391..2255 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig10432.1.1 ID=prot_P-wetherbeei_contig10432.1.1|Name=mRNA_P-wetherbeei_contig10432.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=312bp
MAKGRRYLVSQPKYRHILDLRCQMHAFNLLYSSFFRHPVPKSIMRTVQQM
VMFVRTSHEVGELVRQKARELSKKSRALKTSNKTRFTFGEASLSSIAELE
DVLQNDYGDASALFQHKPERVAILSDRWRDFWRQLRKFLKLLLPISKVIT
MVQSDECTLADITRFWLYLAKDLVDVMAASELTAEYISHAAAQYIRRVQA
LHLDLHRLALFRDPTHKLVGAGGGDETKFEATTDAARGASPFEAAEGPDG
DPDADVLGEEDLAELFTVFDACIVHADDEVEQADQPSVEGMVGLREDNGI
DVNHAALAPDF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf