prot_P-wetherbeei_contig10292.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig10292.1.1
Unique Nameprot_P-wetherbeei_contig10292.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length232
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig10292.1.1 vs. uniprot
Match: A0A836CHX3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHX3_9STRA)

HSP 1 Score: 102 bits (254), Expect = 8.000e-23
Identity = 72/216 (33.33%), Postives = 96/216 (44.44%), Query Frame = 0 
Query:   20 PTLKILPNIDYGGGRAELLSGRRLPGPDGF---VDRDFESYPYALAPSMDN--GLEIAAMAGAEFSDWLRRTVDRNVNGIRYTFDRQQWKNGFQKWWARLLEADEHARMDFARLYPRMEGMNRAGIGGGGVAGXGAGIGHHARPVEEDWGHIYLECVEIADEARAAAGGSKPRLAPVTVEADDHGGDSEMIDCAMRGKWRLRYDEDDGAEIDFSPR 230
            P L+I+ N          LS R   GP G     +R+F +Y  A      N     +AAMA AEF DW+ RT+ RN+ G  + FD +QW+    KWW R LEADE AR++FAR Y R        +GGGG  G                             A A       RLA V V  +      E+ DCA+ G+W++ Y +D    +D+ PR
Sbjct:   66 PPLRIMAN----------LSPRSSGGPRGMRNMQEREFSTYQNAATVDRLNLHFEPMAAMACAEFKDWVARTLARNLEGHAFEFDTRQWQTSVAKWWGRALEADETARLEFARQYLR--------LGGGGXXGRXXXXXXRRXXXXXXXXXXXXXXXXXXXXAGA-------RLAAVPVYTE------EIEDCAVNGRWQVTYGDDGAQVVDYVPR 250
[Close]
BLAST of mRNA_P-wetherbeei_contig10292.1.1 vs. uniprot
Match: D7G502_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G502_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 2.560e-18
Identity = 52/126 (41.27%), Postives = 72/126 (57.14%), Query Frame = 0 
Query:   50 VDRDFESYPYALAPSMDNGLEIAAMAGAEFSDWLRRTVDRNVNGIRYTFDRQQWKNGFQKWWARLLEADEHARMDFARLYPRMEGMNRAGIGGGGVAGXGAGIGHHARPVEEDWGHIYLECVEIAD 175
            VD+D     +    S D    IAAMA  EFSD+LRRTV+RN+NG ++ FD +QW +  +KWW+R +E D  A+ D  RLY    G   A        G  A +   AR VE++W  IY++C ++AD
Sbjct:  103 VDKDVTYGAFLTEESFD----IAAMAWEEFSDFLRRTVERNLNGAQFDFDTRQWSSSIRKWWSRAVEMDVQAKADLFRLYDSSVGQRDA-------RGNQA-LKVDAR-VEDEWDSIYVDCQDVAD 215
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10292.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A836CHX3_9STRA8.000e-2333.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G502_ECTSI2.560e-1841.27Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10292contigP-wetherbeei_contig10292:196..1593 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10292.1.1mRNA_P-wetherbeei_contig10292.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig10292 55..2226 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig10292.1.1 ID=prot_P-wetherbeei_contig10292.1.1|Name=mRNA_P-wetherbeei_contig10292.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=232bp
MQEGGDRFERRGDSGPSFPPTLKILPNIDYGGGRAELLSGRRLPGPDGFV
DRDFESYPYALAPSMDNGLEIAAMAGAEFSDWLRRTVDRNVNGIRYTFDR
QQWKNGFQKWWARLLEADEHARMDFARLYPRMEGMNRAGIGGGGVAGGGA
GIGHHARPVEEDWGHIYLECVEIADEARAAAGGSKPRLAPVTVEADDHGG
DSEMIDCAMRGKWRLRYDEDDGAEIDFSPRQ*
back to top