mRNA_P-wetherbeei_contig993.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig993.1.1
Unique NamemRNA_P-wetherbeei_contig993.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig993.1.1 vs. uniprot
Match: D7G3Y7_ECTSI (Bardet-Biedl syndrome 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Y7_ECTSI)

HSP 1 Score: 491 bits (1264), Expect = 2.450e-164
Identity = 285/618 (46.12%), Postives = 391/618 (63.27%), Query Frame = 1
Query:    1 NPSPAASKSGPWMHAWHDPLAGLRTHNSCVRFADLYGDGDYRLVVADNSRLLKVYRGTGVAEVLPLLEQPVALCCFY--------AAAQLPPLTASIAVAAGPSVYIYRNMRPYFKFMLPPRAANPAEDAAWAILRTIGGHGGKSRDDADADAVWDALSAARDRGVPLSTRAQDFLALSDPEDRRRSFAALASAPPPSLARSSMTCMETICRSGNGGGGDGVLSSLVLGTEDGEVILLDPPSTIRATVRLP--AVPAFLAPSGALDAEWRIVVACRGGRLFTVKSGESRGSAVVTGTVIDLGAAPCALARLQKCIYAATADDRLHSILLKGRRNFALQMPAAITALEPLVTRTSARLLVALASGEVRLY-MEKALVHSLMPVGRDAVAALRFGRYAREENTMAVVTRGGAVVIKMLSRRSSLEPS---GGSAPGPPPEQDIPLAIPKRTKLHVEQTERERAHGPAMHRAFQRDLCLLRLQAARGYVKLISAGEMAGTGTAGAPSVRLTAECRGLGPNFRLRLGIQNAGARSLLNVSVAFVYPRRLYRMECSQFLIPLLLPGLLVHRSANVTSVDEAGAAGPVRVIILA-SDPTARGGGGSGGPLASAVINMPPSELLD 1809
            +P P   + GPW+ AWHDP+AGL  +  C++F DL  +GDY++VVA  +  LKVY+GT +    PLL++P  LC FY        A  + P    ++AVAAGP ++IY+N+RPYFKF  P    +  E   W   R         + + DAD +   L+ A + GV L   + DFLA  D EDR  SF +   A  P    + +TC+ T+ R+      +G    L+ GTEDG+++ LDPP  +  T +LP  AVPAFLA  G  D++WR+ VACR GR++TVK G+   +AVVTGTVI L A PC LARL + +YAAT D+ LH+  LKGRR+F+L+MPA +  LE + TR++  LLVALA G VRLY  EK L+H+L    ++ +AALRFG YARE+  +AVV+  G + I ML+R++ L      G +  G PPEQDIPL +PK+TKL+VEQT+R +     +HRAFQ+DLCLLRL AAR YVK I+ G    +    A S+RL A+C+GLGPNF+++L +QN G R+L N+ VAF Y R +Y ME  QF++  L+PG+       +T++DE GAAG VR+++L+ S P+         PL SAV+NMP SEL+D
Sbjct:   13 DPLPEKGRLGPWLAAWHDPVAGLTCNGGCMQFMDLSRNGDYKIVVACRAMSLKVYQGTSIFAEHPLLDEPSGLCAFYGVEDNTNTAGGERP----AVAVAAGPYIFIYKNLRPYFKFTAPLVEPSDEELEIWTRYR---------KGEVDADTLKALLAKATEDGVRLGPLSTDFLA-PDLEDRG-SFLSARGASEPLSRTTIITCLATMNRAREE---EGSPVCLLAGTEDGQIVFLDPPCKVLTTAQLPRGAVPAFLAVGGLFDSDWRLAVACRNGRIYTVKDGDVAKTAVVTGTVISLEATPCGLARLPRQVYAATTDNNLHAYHLKGRRDFSLKMPALVVQLEAMETRSTTCLLVALADGNVRLYDAEKNLLHTLKT--QEPIAALRFGPYAREDGALAVVSVTGKLTIFMLNRKADLRKPKTFGAATAGYPPEQDIPLKVPKKTKLYVEQTQRAKLQAGEIHRAFQKDLCLLRLTAARAYVKTITDGRQGVSAVGAAASLRLHAQCQGLGPNFKIKLELQNQGDRALTNLPVAFTYDRDIYAMEKGQFMVSALIPGVSSRHEIAITNIDEGGAAGSVRILVLSPSGPS---------PLVSAVVNMPLSELID 601          
BLAST of mRNA_P-wetherbeei_contig993.1.1 vs. uniprot
Match: A0A836CLJ0_9STRA (Bardet-Biedl syndrome 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLJ0_9STRA)

HSP 1 Score: 445 bits (1144), Expect = 2.790e-146
Identity = 286/614 (46.58%), Postives = 356/614 (57.98%), Query Frame = 1
Query:    4 PSPAASK-SGPWMHAWHDPLAGLRTHNSCVRFADLYGDGDYRLVVADNSRLLKVYRGTGVAEVLPLLEQPVALCCFYA-AAQLPPLTASIAVAAGPSVYIYRNMRPYFKFMLPPRAANPAEDAAWAILRTIGGHGGKSRDDADAD--AVWDALSAARDRGVPLSTRAQDFLALSDPEDRRRSFAAL---ASAPPPSLARSSMTCMETICRSGNGGGGDGVLSSLVLGTEDGEVILLDPPSTIRATVRLPAVPAFLAPSGALDAEWRIVVACRGGRLFTVKSGESRGSAVVTGTVIDLGAAPCALARLQKCIYAATADDRLHSILLKGRRNFALQMPAAITALEPLVTRTSARLLVALASGEVRLYMEKALVHSLMPVGRDAVAALRFGRYAREENTMAVVTRG-GAVVIKMLSRRSSLEPSGGSAPGPPPEQDIPLAIPKRTKLHVEQTERERAHGPAMHRAFQRDLCLLRLQAARGYVKLISAGEMAGTGTAGAP------SVRLTAECRGLGPNFRLRLGIQNAGARSLLNVSVAFV-YPRRLYRMECSQFLIPLLLPGLLVHRSANVTSVDEAGAAGPVRVIILASDPTARGGGGSGGPLASAVINMPPSE 1800
            P PAA+K SGPW+HAW+DPLAG+  H   +  ADL GDGD  L+VAD+    K+YRGT  A V PLLEQP ALC ++  A      T S+A+AAGPSVYIYRN+RPY+KF  P +     E AAWA         G +RD  DA   A  DAL AAR  G  LS R+ D LA   P  RR +  A    A A PP++     TC+  + R+  G         LV+GTE G V+L+ PP  +   V LPA PA +  +G LD EWR+V ACR G+++TVK+GE R SAV+ G  I+L A P ALAR  + I+ AT D  LH   LKGRR  AL+ PA I ALEPL    +  LLVALASG +RLY   AL+H+L  +G    AALRFGR+ RE+  +AVV RG GA+V+K+L R+++L     +  GPP EQD+PL +P++T+L VEQ  RER    AMHRAFQRDL  LRL+ AR YV+ ++ G                 SVRL AEC GLGP FRLR+ + N  AR +    V     P  LY                  H    +   D AGAAG VRV++L         GG G  LASAV+NMP SE
Sbjct:   13 PLPAANKKSGPWLHAWYDPLAGIHVHGGAMALADLQGDGDGCLLVADDDERFKIYRGTSFAAVQPLLEQPSALCAYHPDAGAAAARTPSVAIAAGPSVYIYRNLRPYYKFTTPAQEPCQQELAAWA---------GLTRDSPDAALAAAADALRAARRGGAALSARSADLLASDAPAARRAAADAWHGRAMAQPPAV-----TCLTKLRRAREGADAP---CCLVVGTEAGGVLLVGPPGGVIVAVTLPAPPALIEATGLLDVEWRVVAACRNGKIYTVKNGEGRRSAVLAGAAIELNALPVALARQGRLIHVATMDRVLHCYSLKGRRAHALRQPAPIVALEPLARGAAECLLVALASGALRLYAGAALLHTL-ELGAPP-AALRFGRFGREDAALAVVLRGSGALVVKILDRKAALSAPSAADAGPPAEQDVPLPVPRKTRLFVEQAAREREAPAAMHRAFQRDLARLRLRTARAYVEAVAGGXXXXXXXXXXXXXXXXXSVRLHAECLGLGPRFRLRVQLVNCAARPVAGARVCVASVPPALYAXXXXXXXXXXXXXXXPAHVEVGLVCTDPAGAAGAVRVLVL---------GGGGEVLASAVVNMPVSE 598          
BLAST of mRNA_P-wetherbeei_contig993.1.1 vs. uniprot
Match: A0A7S1IQI7_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IQI7_9EUGL)

HSP 1 Score: 434 bits (1116), Expect = 5.710e-142
Identity = 245/598 (40.97%), Postives = 369/598 (61.71%), Query Frame = 1
Query:   25 SGPWMHAWHDPLAGLRTHNSCVRFADLYGDGDYRLVVADNSRLLKVYRGTGVAEVLPLLEQPVALCCFYAAAQLPPLTASIAVAAGPSVYIYRNMRPYFKFMLPPRAANPAEDAAWAILRTIGGHGGKSRDDADADAVWDALSAARDRGVPLSTRAQDFLALSDPEDRRRSFAALASAPPPSLARSSMTCMETICRSGNGGGGDGVLSSLVLGTEDGEVILLDPP-STIRATVRLPAVPAFLAPSGALDAEWRIVVACRGGRLFTVKSGESRGSAVVTGTVIDLGAAPCALARLQKCIYAATADDRLHSILLKGRRNFALQMPAAIT---ALEPLVTRTSARLLVALASGEVRLYMEKALVHSLMPVGRDAVAALRFGRYAREENTMAVVTRGGAVVIKMLSRRSSLEPSGGSAPGPPPEQDIPLAIPKRTKLHVEQTERERAHGPAMHRAFQRDLCLLRLQAARGYVKLISAGEMAGTGTAGAPSVRLTAECRGLGPNFRLRLGIQNAGARSLLNVSVAFVYPRRLYRMECSQFLIPLLLPGLLVHRSANVTSVDEAGAAGPVRVIILASDPTARGGGGSGGPLASAVINMPPSELL 1806
            SG W+ AW DPLAG+R  ++C+  AD+ GDG ++L+VAD SR LKV+ GT +    PLL+ P A+CCFY +        ++A+++GP +YIY N+RPY+KF LPP   N  E   WA LR        ++    A AV D L  A++ GV L++R+ D LAL D  D++ S+ A     P  L + ++     + +        G +  LV+GTE+  +++LDP  S+I   V LP++PAF+  +G  D ++RIVVACR G ++TV+ GE      +TG VI+L + PC L R+ K I   T  + +HS  +KG++ +++ MP  IT   AL     RT+   +VALA+GE+R+Y  K+L+H+L     D +  L+FG+YARE+NT+ +  R G + IKML R +SLE + G   GPPPEQ+IP+ +PK+T+L++EQT+RE+  G  MHR FQRDLC LRL  AR YVK+++ G+   + T+G+ S+RLTA  +GLGP F+++L IQN G +SL  + + F + + +YRM     L+PLL+P L+ +   +V  +DEA  A  +RV +   +        S  P+ +A++NMP ++ L
Sbjct:   40 SGLWLDAWKDPLAGVRAFSNCLELADIAGDGSHKLLVADASRTLKVFSGTELVAENPLLDVPSAICCFYMSYNDAVHRPAVAISSGPYIYIYMNLRPYYKFTLPPVEVNQVEADIWANLR--------NQKITIAQAVED-LENAKENGVSLTSRSLDLLALEDDGDKQMSYVAEHKNSP--LVQQTVIVTMAVLKKDKEE--HGAIGCLVIGTENCRILILDPTGSSIMKKVSLPSIPAFIVATGLYDVDYRIVVACRNGNIYTVRDGE------LTGVVIELESQPCGLCRVDKSIMVGTMANVMHSYHVKGKKQYSVYMPCGITNMTALSMETMRTTKATIVALANGEIRVYNAKSLIHTLQT--NDIITGLKFGKYAREDNTLVIAYRSGTIHIKMLPRLASLEATKGQNAGPPPEQNIPIRVPKKTRLYIEQTQREKEFGTEMHRVFQRDLCKLRLATARAYVKVLTDGQGPLSYTSGS-SLRLTAHVQGLGPLFKIKLNIQNTGTKSLTAIPIVFTFNQSIYRMPNPTLLLPLLVPSLVYNYEVDVECIDEAAGADVIRVYVCNPN--------SAIPIITALVNMPLADFL 607          
BLAST of mRNA_P-wetherbeei_contig993.1.1 vs. uniprot
Match: A0A7S4FYB0_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FYB0_9EUGL)

HSP 1 Score: 431 bits (1107), Expect = 1.590e-140
Identity = 241/603 (39.97%), Postives = 367/603 (60.86%), Query Frame = 1
Query:   10 PAASKSGPWMHAWHDPLAGLRTHNSCVRFADLYGDGDYRLVVADNSRLLKVYRGTGVAEVLPLLEQPVALCCFYAAAQLPPLTASIAVAAGPSVYIYRNMRPYFKFMLPPRAANPAEDAAWAILRTIGGHGGKSRDDADADAVWDALSAARDRGVPLSTRAQDFLALSDPEDRRRSFAALASAPPPSLARSSMTCMETICRSGNGGGGDGVLSSLVLGTEDGEVILLDPP-STIRATVRLPAVPAFLAPSGALDAEWRIVVACRGGRLFTVKSGESRGSAVVTGTVIDLGAAPCALARLQKCIYAATADDRLHSILLKGRRNFALQMPAAIT---ALEPLVTRTSARLLVALASGEVRLYMEKALVHSLMPVGRDAVAALRFGRYAREENTMAVVTRGGAVVIKMLSRRSSLEPSGGSAPGPPPEQDIPLAIPKRTKLHVEQTERERAHGPAMHRAFQRDLCLLRLQAARGYVKLISAGEMAGTGTAGAPSVRLTAECRGLGPNFRLRLGIQNAGARSLLNVSVAFVYPRRLYRMECSQFLIPLLLPGLLVHRSANVTSVDEAGAAGPVRVIILASDPTARGGGGSGGPLASAVINMPPSELL 1806
            P   K   W++AW DPLAG R  +SC+  AD+ GDG+++L++AD ++ LKVY GT +     LL+ P A+CCFY          ++AV++GP +YIY N+RPY+KF LPP   N  E   WA LR+                  D L  A++ GV L++R+ D LAL D  ++++++       P  L + ++    T+ +        G +  LV+GTE+  +++LDP  S+I   V+LP++PAF+  +G  D ++RIVVACR G ++TV+ GE      +TG VI+L + PC LAR+ K +   T  + LHS  +KG++ +++ +P++IT   AL     RT+   +VALA+GE+R+Y  K+L+H+L     D V  L+FG+YARE+NT+ V  R G + IKML R +SLE + G   GPPPEQ+IP+ +PK+T+L++EQT+RE+  G  MHR FQRDLC LRL  AR YVK+++ G+   + T+G+ S+RLTA  +GLGP F+++L IQN G +SL  + + F + + +YRM     L+PLL+P L+ +   +V  VDE   A  +RV +            S  P+ +A++NMP ++ L
Sbjct:   42 PKDEKKPLWLNAWEDPLAGARAFSSCIELADITGDGNHKLLIADANKQLKVYSGTDLVAENALLDVPSAICCFYMTYNDAVHRPAVAVSSGPYIYIYMNLRPYYKFTLPPVEVNQIETDIWANLRS---------QKIPVQQAVDDLENAKENGVSLTSRSLDLLALEDDAEKQKAYVDDHRNSP--LIQQTVIVAMTVLKKDKDE--HGAIGCLVIGTENSRILILDPTGSSIMKKVQLPSIPAFIVATGLYDVDYRIVVACRNGNVYTVRDGE------LTGIVIELESQPCGLARVDKSVMVGTMANVLHSYHVKGKKQYSVYLPSSITNMVALSMETMRTTKATIVALANGEIRVYNGKSLIHTLET--NDVVMGLKFGKYAREDNTLVVAYRSGTIHIKMLPRLASLEVTKGQTSGPPPEQNIPIRVPKKTRLYIEQTQREKEFGTEMHRVFQRDLCKLRLATARAYVKVLTDGQGPLSYTSGS-SLRLTAHVQGLGPLFKIKLNIQNTGTKSLTEIPIVFTFNQSIYRMPSPTLLLPLLVPSLVYNYEVDVECVDEGAGADVIRVYVCNPH--------SAIPIITALVNMPLADFL 614          
BLAST of mRNA_P-wetherbeei_contig993.1.1 vs. uniprot
Match: A0A8J5XY91_DIALT (BBS1 domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XY91_DIALT)

HSP 1 Score: 426 bits (1094), Expect = 4.240e-139
Identity = 261/605 (43.14%), Postives = 368/605 (60.83%), Query Frame = 1
Query:    4 PSPAASKSGPWMHAWHDPLAGLRTHNSCVRFADLYGDGDYRLVVADNSRLLKVYRGTGVAEVLPLLEQPVALCCFYAAAQLPPLTASIAVAAGPSVYIYRNMRPYFKFMLPPRAANPAEDAAWAILRTIGGHGGKSRDDADADAVWDALSAARDRGVPLSTRAQDFLALSDPEDRRRSFAALASAPPPSLARSSMTCMETICRSGNGGGGDGVLSSLVLGTEDGEVILLDPPS-TIRATVRLPAVPAFLAPSGALDAEWRIVVACRGGRLFTVKSGESRGSAVVTGTVIDLGAAPCALARLQKCIYAATADDRLHSILLKGRRNFALQMPAAITALEPLVT---RTSARLLVALASGEVRLYMEKALVHSLMPVGRDAVAALRFGRYAREENTMAVVTRGGAVVIKMLSRRSSLEPSGGSAPGPPPEQDIPLAIPKRTKLHVEQTERERAHGPAMHRAFQRDLCLLRLQAARGYVKLISAGEMAGTGTAGAPSVRLTAECRGLGPNFRLRLGIQNAGARSLLNVSVAFVYPRRLYRMECSQFLIPLLLPGLLVHRSANVTSVDEAGAAGPVRVIILASDPTARGGGGSGGPLASAVINMPPSELL 1806
            P  A  +  PW+HAW DP+A L+  + C+R  DL GDGDY+L+VAD  R LKVYR T +     LL+ PV++C  Y     P +  S+AVA+GP V+IYR +RPY+KF +PP     AE   W  L     H G      D     DAL AARD G  L+TR+ D +     ++R     A   AP     ++ +TCME I ++ +    +  LS LVLGTE G V++LD    TI    +LP+ P +LA +G  D E+R+V ACR G ++T+K+GE      ++GTV++L A PC LAR+ K I  A     +H+  +KG+++ +L MPA + A+E L     R+   LLV+L +GEVRLY++K+++ ++     D    +RFG Y REE  +A+V + G +VIKML R ++LE S G+ PGPPPEQDIPLAIPK+T+L+VEQT+RER     MHR FQRDLC LRL  AR YVK+++ G+ A + T G  SVRLTA  +GLGP F+LRL +QN G + ++++ + F     LY++      +PLLLP +      +V S+DEAGA+  VRV +    PT++       P+ SAV+ MP SE++
Sbjct:    4 PIAAPPQRSPWLHAWRDPVANLKAFSPCMRLVDLNGDGDYKLIVADAERRLKVYRNTSLISENVLLDTPVSMCVTYTETSKPRVP-SVAVASGPHVFIYRRLRPYYKFSVPPTPLAQAEANVWTKL-----HSGAM----DIAEAVDALVAARDGGTLLTTRSVDLINTEALDERTALVDAWRGAP--LTHQTVITCMEVIRKNMDE---EDALSQLVLGTEAGSVLVLDVTGVTIVNRFQLPSTPVYLAITGLYDVEYRLVCACRNGSIYTIKNGE------LSGTVVELEAQPCGLARIDKHILVACMGAVVHAYHIKGKKSHSLFMPAPVAAIEVLSLERMRSVKALLVSLHNGEVRLYVDKSIIATIHL--DDPAVGMRFGAYGREEAALAMVGKAGTLVIKMLQRTANLE-SSGAPPGPPPEQDIPLAIPKKTRLYVEQTQREREQATEMHRIFQRDLCKLRLNTARAYVKVLTDGQGAQSYTVGQ-SVRLTAGVQGLGPLFKLRLNLQNLGNKPVVDLEMTFSANTMLYKLHTHVLQLPLLLPSVTYRCDCDVESIDEAGASDMVRVYVCT--PTSKV------PVISAVVTMPLSEVI 575          
BLAST of mRNA_P-wetherbeei_contig993.1.1 vs. uniprot
Match: A0A7S0LFK4_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LFK4_9EUKA)

HSP 1 Score: 409 bits (1052), Expect = 1.020e-132
Identity = 244/595 (41.01%), Postives = 362/595 (60.84%), Query Frame = 1
Query:   34 WMHAWHDPLAGLRTHNSCVRFADLYGDGDYRLVVADNSRLLKVYRGTGVAEVLPLLEQPVALCCFYAAAQLPPLTASIAVAAGPSVYIYRNMRPYFKFMLPPRAANPAEDAAWAILRTIGGHGGKSRDDADADAVWDALSAARDRGVPLSTRAQDFLALSDPEDRRRSFAALASAPPPSLARSSM-TCMETICRSGNGGGGDGVLSSLVLGTEDGEVILLDPPST-IRATVRLPAVPAFLAPSGALDAEWRIVVACRGGRLFTVKSGESRGSAVVTGTVIDLGAAPCALARLQKCIYAATADDRLHSILLKGRRNFALQMPAAITALEPLVT--RTSARLLVALASGEVRLYMEKALVHSLMPVGRDAVAALRFGRYAREENTMAVVTRGGAVVIKMLSRRSSLEPSGGSAPGPPPEQDIPLAIPKRTKLHVEQTERERAHGPAMHRAFQRDLCLLRLQAARGYVKLISAGEMAGTGTAGAPSVRLTAECRGLGPNFRLRLGIQNAGARSLLNVSVAFVYPRRLYRMECSQFLIPLLLPGLLVHRSANVTSVDEAGAAGPVRVIILASDPTARGGGGSGGPLASAVINMPPSELL 1806
            W+HAWHDP+AG++    CVR ADL GDGD +L+V    + LK+Y+GT +     LL+ PVA+C F +  +    + S+AV AG  V+IYRN+RPY+KF LP    +  E A W  L +      + R     D V + L+  RD G  +S+R+QD L + DP +  R    +   P   L R ++ TCME + +  +    +G +S LV+GTE G+V +L+P  T    +V+LPA PAF+A +G    E+RIV ACR G ++++K+GE       TG  I+L A PC L R+ K I  A     +++  +KG++ ++L +P+    +E L    R +  LL+ LA+GE+R Y EK L+ +L  +G + +  LRFG Y REE+++  +   G++ IKML R++ L+ S  +  GPPPEQD+PL+IPK+TKL+VEQT+RER     MHR FQRDLC LRL  AR YVK+I+ G+   + T+G+ S+RLTA+ +GLGP F+++L +QN G + + ++     Y   LYR++ S F IPLL+PG+++   A +  VDE G A  +RV + ++         S  P+ SAV+NMP SE L
Sbjct:   21 WLHAWHDPVAGIKAFTPCVRLADLSGDGDSKLLVGTADKRLKIYKGTNLLSENVLLDAPVAICTFNSDGKKGS-SPSVAVGAGAYVFIYRNLRPYYKFTLPLLEVSTREVALWKELTS------RQR---SIDEVREELANMRDGGSAISSRSQDLLGIDDPHEATRFIDDVKGKP---LVRQTVVTCMEVLRKDMDE---EGSISMLVVGTEAGQVHILEPSGTRANVSVQLPATPAFMAVTGLYTVEYRIVCACRDGHVYSIKNGEQ------TGAAIELEAMPCGLVRIDKTILVACMSSVVNAFHIKGKKLYSLFLPSPAVCIEQLELQKRAARALLLGLANGELRCYQEKHLIATLQ-LG-ETLTGLRFGPYGREESSLICIGESGSITIKMLQRQADLD-SAANPVGPPPEQDVPLSIPKKTKLYVEQTQREREQATDMHRIFQRDLCKLRLSTARSYVKIITDGQGPVSYTSGS-SLRLTAQVQGLGPAFKVKLSLQNTGRKVVTDMVATLTYNAMLYRLKQSLFKIPLLVPGVMLRLDAELECVDENGGADTIRVFVCSAK--------SSMPILSAVVNMPMSETL 581          
BLAST of mRNA_P-wetherbeei_contig993.1.1 vs. uniprot
Match: A0A067C4C7_SAPPC (BBS1 domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C4C7_SAPPC)

HSP 1 Score: 401 bits (1031), Expect = 1.470e-129
Identity = 239/604 (39.57%), Postives = 363/604 (60.10%), Query Frame = 1
Query:    4 PSPAASKSGPWMHAWHDPLAGLRTHNSCVRFADLYGDGDYRLVVADNSRLLKVYRGTGVAEVLPLLEQPVALCCFYAAAQLPPLTASIAVAAGPSVYIYRNMRPYFKFMLPPRAANPAEDAAWAILRTIGGHGGKSRDDADADAVWDALSAARDRGVPLSTRAQDFLALSDPEDRRRSFAALASAPPPSLARSSMTCMETICRSGNGGGGDGVLSSLVLGTEDGEVILLDPP-STIRATVRLPAVPAFLAPSGALDAEWRIVVACRGGRLFTVKSGESRGSAVVTGTVIDLGAAPCALARLQKCIYAATADDRLHSILLKGRRNFALQMPAAITALEPLV---TRTSARLLVALASGEVRLYMEKALVHSLMPVGRDAVAALRFGRYAREENTMAVVTRGGAVVIKMLSRRSSLEPSGGSAPGPPPEQDIPLAIPKRTKLHVEQTERERAHGPAMHRAFQRDLCLLRLQAARGYVKLISAGEMAGTGTAGAPSVRLTAECRGLGPNFRLRLGIQNAGARSLLNVSVAFVYPRRLYRMECSQFLIPLLLPGLLVHRSANVTSVDEAGAAGPVRVIILASDPTARGGGGSGGPLASAVINMPPSEL 1803
            P  A ++  PW+HA H+ +AG++  + C++ AD+YGDGDY+L++AD  R LK+Y+GT +     +L +PVAL  FY+ A  P  T SIAVA+GPS+YIYRNMRPY+KF LP    +P E   W  L         ++ + D       L+  R RG PL+ R++ FLA+ D E +    +     P   +  +++TCM T+ ++ +       +  LV+GTE G++ +LD   + I A   LP+ P  +A +G  D E+R++V+CR G ++TVK+GE      +  +VI+L +  CAL ++ K I  A  D ++ S  LKG++N+++ MP  + A+E L    T+ S  +L+AL  GE+ LY EK  V S        +  + FG++ REE ++ +V + GA+ +K+L R + LE +  S+ GPPPEQDIPL +PK+TKL+VEQT+RER H   MHR FQRDLC LRL   R YVK+I  G+   +   GA S+RL A+ +GLGP+F+++L +QN+GA+ + ++ +A  Y   LYR+  S   IPLLLPG+    + +V S+D  GAA  + + +   D           P+ SAV+NMP S++
Sbjct:   11 PEKAKAEKSPWLHAHHNAVAGIKAFSPCIKLADVYGDGDYKLLIADADRRLKLYKGTTLLSEQAVLGEPVALSVFYSDAARPR-TPSIAVASGPSIYIYRNMRPYYKFTLPSLDVSPDETKLWGQL---------AKCEVDIVGAVHQLNLLRSRGTPLTQRSRGFLAIDDMEQQAEFVSRYMDDP--LVEHTAITCMTTLSKNMDE---KDAIGCLVVGTEAGQIYVLDQQGANIAAKAFLPSTPVEIAVNGLYDVEYRLIVSCRNGSVYTVKNGE------LLKSVIELESPACALLQMDKGIIVACMDRKVSSFHLKGKKNWSMIMPQDVVAMEALNLRRTKHSKGILIALRKGEILLYNEKIKVTSFHL--DSLLTGMVFGQFGREEASLVLVHKSGALTLKILQRNADLEGTSTSS-GPPPEQDIPLNVPKKTKLYVEQTQRERDHAIEMHRHFQRDLCKLRLTTVRSYVKVIRDGQGPVSFATGA-SIRLNAKVQGLGPHFKIQLQLQNSGAKFVADIPIALHYDHGLYRIPQSLLQIPLLLPGVQYAYAIDVESIDATGAADSIYIFVCGKDSCV--------PIVSAVVNMPLSDV 581          
BLAST of mRNA_P-wetherbeei_contig993.1.1 vs. uniprot
Match: A0A024TEN6_9STRA (BBS1 domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TEN6_9STRA)

HSP 1 Score: 399 bits (1024), Expect = 2.500e-128
Identity = 239/606 (39.44%), Postives = 364/606 (60.07%), Query Frame = 1
Query:    7 SPAASKSGPWMHAWHDPLAGLRTHNSCVRFADLYGDGDYRLVVADNSRLLKVYRGTGVAEVLPLLEQPVALCCFYAAAQLPPLTASIAVAAGPSVYIYRNMRPYFKFMLPPRAANPAEDAAWAILRTIGGHGGKSRDDADADAVWDALSAARDRGVPLSTRAQDFLALSDPEDRRRSFAALASAPPPSLARSSMTCMETICRSGNGGGGDGVLSSLVLGTEDGEVILLDPPST-IRATVRLPAVPAFLAPSGALDAEWRIVVACRGGRLFTVKSGESRGSAVVTGTVIDLGAAPCALARLQKCIYAATADDRLHSILLKGRRNFALQMPAAITALEPLVTRTSAR---LLVALASGEVRLYMEKALVHSLMPVGRDAVAALRFGRYAREENTMAVVTRGGAVVIKMLSRRSSLEPSGGSAPGPPPEQDIPLAIPKRTKLHVEQTERERAHGPAMHRAFQRDLCLLRLQAARGYVKLISAGEMAGTGTAGAPSVRLTAECRGLGPNFRLRLGIQNAGARSLLNVSVAFVYPRRLYRMECSQFLIPLLLPGLLVHRSANVTSVDEAGAAGPVRVIILASDPTARGGGGSGGPLASAVINMPPSELLDV 1812
            +P   +  PW+HA+H+ +AG++   +CV+ AD+YGDGD +L+VAD+ R LK+Y+G+ +     LL  PVALC FY+ +  P +  SIAVA+GPS+YIYRNMRPY+KF +P    +P E+  W  +         ++ + D  A    L+  R  G  L+ R++ FLA+ D + +    +     P   + ++++TCM T+ ++ +       +S LV+GTE  +V +LD   T +     +PAVP  +  +G  D E+R++V+CR G ++TVK+GE      +  +VI+L +  C L ++ K I  A  D ++ S  LKG++N+++ MP  I ALE +  R +     +L+AL  GE+ LY EK  VHS    G  ++ A+ FG++ REE ++ +V + GA+ +K+L R + LE +  +A GPPPEQD+PL +PK+TKL+VEQT+RER H   MHR FQRDLC LRL   R YVK+I  G+   +   GA ++RL A+ +G+GP F++ L +QNAG +   +  +A  Y   LYR+  S  ++PLLLPG+L   + +V SV  A  A  + + +         G GS  PL SAV+NMP SELL V
Sbjct:   26 APHVVEKNPWLHAYHNSVAGIKAFTNCVQLADVYGDGDSKLIVADSDRRLKLYKGSTLMSEQALLGVPVALCAFYSESTRPRMP-SIAVASGPSIYIYRNMRPYYKFTVPVLDIDPEEEKLWKSI---------AKCETDIPAATHQLNLLRANGSRLTQRSRGFLAIDDIDQQAEYMSRCMDEP--LVEQTTITCMTTVNKNMDE---KDAISCLVVGTEAAQVYILDQQGTAVLCKTAIPAVPVDMVVNGLYDVEYRVIVSCRNGSVYTVKNGE------LLRSVIELESPACGLLQMDKSIIVACVDGKVISYHLKGKKNWSMAMPHDIVALEAMNLRRTKHTKGILIALRKGEILLYHEKIKVHSFKIEG--SLTAMVFGQFGREEASLVLVHKTGALTLKILQRNADLE-ANATAAGPPPEQDVPLNVPKKTKLYVEQTQRERDHATEMHRHFQRDLCKLRLTTVRSYVKVIRDGQGPVSYATGA-AIRLHAKVQGMGPRFKIHLQLQNAGTKFASDAPLALHYDHTLYRVHPSLLIVPLLLPGVLYTYTVDVESVSPA--ADSIYIFVC--------GKGSCVPLVSAVVNMPLSELLAV 596          
BLAST of mRNA_P-wetherbeei_contig993.1.1 vs. uniprot
Match: A0A1V9ZTA5_9STRA (Bardet-Biedl syndrome 1 family protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZTA5_9STRA)

HSP 1 Score: 398 bits (1023), Expect = 3.970e-128
Identity = 240/605 (39.67%), Postives = 359/605 (59.34%), Query Frame = 1
Query:    4 PSPAASKSGPWMHAWHDPLAGLRTHNSCVRFADLYGDGDYRLVVADNSRLLKVYRGTGVAEVLPLLEQPVALCCFYAAAQLPPLTASIAVAAGPSVYIYRNMRPYFKFMLPPRAANPAEDAAWAILRTIGGHGGKSRDDADADAVWDALSAARDRGVPLSTRAQDFLALSDPEDRRRSFAALASAPPPSLARSSMTCMETICRSGNGGGGDGVLSSLVLGTEDGEVILLDPP-STIRATVRLPAVPAFLAPSGALDAEWRIVVACRGGRLFTVKSGESRGSAVVTGTVIDLGAAPCALARLQKCIYAATADDRLHSILLKGRRNFALQMPAAITALEPLV---TRTSARLLVALASGEVRLYMEKALVHSLMPVGRDAVAALRFGRYAREENTMAVVTRGGAVVIKMLSRRSSLEPSGGSAPGPPPEQDIPLAIPKRTKLHVEQTERERAHGPAMHRAFQRDLCLLRLQAARGYVKLISAGEMAGTGTAGAPSVRLTAECRGLGPNFRLRLGIQNAGARSLLNVSVAFVYPRRLYRMECSQFLIPLLLPGLLVHRSANVTSVDEAGAAGPVRVIILASDPTARGGGGSGGPLASAVINMPPSELL 1806
            PS      GPW+HA+H+ +AG++    C++ AD+YGDGDY+L+VAD  R LK+Y+G+ +     +L  PVALC FY+ + + P T SIAVA+GPS+YIYRNMRPY+KF LPP      E   WA L         ++ + D       L+  R +G  LS R++ FLA+ D E +    +     P   + ++++TCM T+ +S +       +  LV+GTE G+V +LD   + I     LP+ P  +  +G  D E+R++V+CR G ++TVK+GE      +  +VI+L +  CAL ++ K I  A  D ++ S  LKG++N+++ M   I A+E L    T+ S  +L+AL  GEV LY EK  + S        + A+ FG+Y REE ++ +V + GA+ +K+L R + LE +  +A GPPPEQDIPL +PK+TKL+VEQT+RER H   MHR FQRDLC LRL   R YVK+I  G+   +   GA S+RL A+ +G+GP F+++L +QN+GA+   +V +   Y   LYR+  S   IPLLLPG+    + +V ++ + GAA  + + +   D           PL SAV+NMP S+++
Sbjct:   29 PSALTHAIGPWLHAYHNTVAGIKAFTQCIKLADVYGDGDYKLIVADADRRLKMYKGSTLLSEQAILGVPVALCVFYSDS-VRPRTPSIAVASGPSIYIYRNMRPYYKFTLPPLDVVSDEVKLWAQL---------AKCEVDIIGAVHQLNTLRSQGAQLSQRSRGFLAIDDMEQQAEFVSRYMDDP--LVEQTTITCMATLNKSMDE---KDAVGCLVIGTEAGQVYVLDQQGANITTKAYLPSTPVDIVVNGLFDVEYRLIVSCRNGSVYTVKNGE------LLKSVIELESPACALLQMDKSIIVACMDRKITSFHLKGKKNWSMTMAQDIVAMEALNLRRTKNSKGILIALRKGEVLLYNEKIKITSFHL--DSLLTAMVFGQYGREEASLVLVHKSGALTLKILQRNADLEGTS-TASGPPPEQDIPLNVPKKTKLYVEQTQRERDHAVEMHRHFQRDLCKLRLTTVRSYVKVIRDGQGPVSYATGA-SIRLNAKVQGIGPLFKVQLQLQNSGAKFAADVPIVLHYDHGLYRIRQSLLQIPLLLPGVQYAYTIDVENISDTGAADSIYIFVCGKDSCV--------PLVSAVVNMPLSDIV 600          
BLAST of mRNA_P-wetherbeei_contig993.1.1 vs. uniprot
Match: A0A485KBD8_9STRA (Aste57867_1873 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KBD8_9STRA)

HSP 1 Score: 395 bits (1016), Expect = 2.910e-127
Identity = 237/602 (39.37%), Postives = 361/602 (59.97%), Query Frame = 1
Query:   13 AASKSGPWMHAWHDPLAGLRTHNSCVRFADLYGDGDYRLVVADNSRLLKVYRGTGVAEVLPLLEQPVALCCFYAAAQLPPLTASIAVAAGPSVYIYRNMRPYFKFMLPPRAANPAEDAAWAILRTIGGHGGKSRDDADADAVWDALSAARDRGVPLSTRAQDFLALSDPEDRRRSFAALASAPPPSLARSSMTCMETICRSGNGGGGDGVLSSLVLGTEDGEVILLDPPST-IRATVRLPAVPAFLAPSGALDAEWRIVVACRGGRLFTVKSGESRGSAVVTGTVIDLGAAPCALARLQKCIYAATADDRLHSILLKGRRNFALQMPAAITALEPLVTRTSAR---LLVALASGEVRLYMEKALVHSLMPVGRDAVAALRFGRYAREENTMAVVTRGGAVVIKMLSRRSSLEPSGGSAPGPPPEQDIPLAIPKRTKLHVEQTERERAHGPAMHRAFQRDLCLLRLQAARGYVKLISAGEMAGTGTAGAPSVRLTAECRGLGPNFRLRLGIQNAGARSLLNVSVAFVYPRRLYRMECSQFLIPLLLPGLLVHRSANVTSVDEAGAAGPVRVIILASDPTARGGGGSGGPLASAVINMPPSELL 1806
            AA K  PW+HA+H+ +AG++   +C++ AD+YGDGDY+L+VAD  R LK+Y+G+ +     +L  PV L  FY+    P  T SIAVA+GPS+YIYRNMRPY+KF LP    +  E+  WA         G S+ + D  A    L+  R +G+ L+ R++ FLA+ D + +    +     P   + ++++ CM TI ++         +S LV+GTE  ++ +LD   T + +   +P+VP  +  +G  D E+R++V+CR G ++TVK+GE      +  +VI+L +  CAL ++ K I  A  D ++ S  LKG++N+++ MP  I A+E +  R +     +L+AL  GE+ LY EK  VHS    G   ++A+ FG++ REE ++ +V + GA+ +K+L R + LE S  +A GPPPEQDIPL +PK+TKL+VEQT+RER H   MHR FQRDLC LRL   R YVK+I  G+   +   GA S+RL A+ +G+GP F+++L +QN+G +    V +A  Y   LYR++ S   +PLLLPG+    + +V S+  AGAA  + + +   D           PL SAV+NMP +E +
Sbjct:   21 AAEKKSPWLHAYHNTVAGIKAFTNCIQLADVYGDGDYKLLVADMDRRLKMYKGSSLMSEQAILGVPVGLAVFYSEMNRPR-TPSIAVASGPSIYIYRNMRPYYKFSLPVIDVDVEEEKLWA---------GISKCEVDIPAANHQLNLLRSQGIRLTQRSRGFLAIDDIDQQAEYVSRFLDEP--LVEQTTIVCMTTINKNMEE---KDAISCLVVGTEACQIYILDQQGTSVVSKTSIPSVPVDMVINGLYDVEYRVIVSCRNGSVYTVKNGE------LLRSVIELESPACALLQMDKSILVACMDRKIISYHLKGKKNWSMTMPQDIVAMEAMNLRRTKHTKGILIALRKGEILLYQEKIRVHSFNVDG--TLSAMLFGQFGREEASLVLVHKTGALTLKILQRNADLEASATAA-GPPPEQDIPLNVPKKTKLYVEQTQRERDHATEMHRHFQRDLCKLRLTTVRSYVKVIRDGQGPVSYATGA-SIRLNAKVQGVGPRFKIQLQLQNSGTKFAAEVPLALHYDHSLYRVDTSLLYVPLLLPGIQYAYTIDVESL--AGAADSIYIFVCGKDSCV--------PLVSAVVNMPLAEPI 587          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig993.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3Y7_ECTSI2.450e-16446.12Bardet-Biedl syndrome 1 n=1 Tax=Ectocarpus silicul... [more]
A0A836CLJ0_9STRA2.790e-14646.58Bardet-Biedl syndrome 1 n=1 Tax=Tribonema minus Ta... [more]
A0A7S1IQI7_9EUGL5.710e-14240.97Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S4FYB0_9EUGL1.590e-14039.97Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A8J5XY91_DIALT4.240e-13943.14BBS1 domain-containing protein n=2 Tax=Diacronema ... [more]
A0A7S0LFK4_9EUKA1.020e-13241.01Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A067C4C7_SAPPC1.470e-12939.57BBS1 domain-containing protein n=2 Tax=Saprolegnia... [more]
A0A024TEN6_9STRA2.500e-12839.44BBS1 domain-containing protein n=1 Tax=Aphanomyces... [more]
A0A1V9ZTA5_9STRA3.970e-12839.67Bardet-Biedl syndrome 1 family protein n=1 Tax=Ach... [more]
A0A485KBD8_9STRA2.910e-12739.37Aste57867_1873 protein n=1 Tax=Aphanomyces stellat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig993contigP-wetherbeei_contig993:135..2415 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7G3Y7
Preferred nameBBS1
PFAMsBBS1
Model size1815
Max annot lvl2759|Eukaryota
KEGG koko:K16746
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000226,GO:0000902,GO:0000904,GO:0001085,GO:0001103,GO:0001501,GO:0001664,GO:0001764,GO:0001894,GO:0001895,GO:0003008,GO:0003352,GO:0003356,GO:0003674,GO:0005102,GO:0005113,GO:0005119,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005886,GO:0005929,GO:0005930,GO:0006629,GO:0006810,GO:0006892,GO:0006893,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0007600,GO:0007606,GO:0007608,GO:0007610,GO:0007635,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0008283,GO:0008594,GO:0009566,GO:0009653,GO:0009887,GO:0009888,GO:0009987,GO:0010817,GO:0010970,GO:0015031,GO:0015630,GO:0015833,GO:0016020,GO:0016043,GO:0016192,GO:0016358,GO:0016477,GO:0019953,GO:0021537,GO:0021543,GO:0021544,GO:0021591,GO:0021756,GO:0021761,GO:0021766,GO:0021987,GO:0022008,GO:0022414,GO:0022607,GO:0030030,GO:0030031,GO:0030154,GO:0030182,GO:0030534,GO:0030705,GO:0030900,GO:0031090,GO:0031175,GO:0031253,GO:0031503,GO:0031514,GO:0032501,GO:0032502,GO:0032838,GO:0032879,GO:0032886,GO:0032989,GO:0032991,GO:0033036,GO:0033365,GO:0034451,GO:0034464,GO:0034613,GO:0035721,GO:0036064,GO:0040011,GO:0040012,GO:0042048,GO:0042073,GO:0042221,GO:0042445,GO:0042461,GO:0042592,GO:0042886,GO:0042995,GO:0043001,GO:0043005,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044237,GO:0044238,GO:0044255,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044450,GO:0044459,GO:0044463,GO:0044464,GO:0044703,GO:0044782,GO:0045184,GO:0045444,GO:0045494,GO:0046530,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048854,GO:0048856,GO:0048869,GO:0048870,GO:0048871,GO:0050789,GO:0050794,GO:0050877,GO:0050896,GO:0051179,GO:0051216,GO:0051219,GO:0051234,GO:0051270,GO:0051641,GO:0051649,GO:0051674,GO:0051704,GO:0060170,GO:0060249,GO:0060271,GO:0060295,GO:0060296,GO:0060322,GO:0060632,GO:0061351,GO:0061448,GO:0061512,GO:0061951,GO:0065007,GO:0065008,GO:0070491,GO:0070727,GO:0070925,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072657,GO:0072659,GO:0090150,GO:0097014,GO:0097458,GO:0098588,GO:0098590,GO:0098876,GO:0099111,GO:0099568,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1902019,GO:1905515,GO:1990778,GO:2000145
Exons4
Evalue4.01e-165
EggNOG OGs2CMUT@1|root,2QS2X@2759|Eukaryota
DescriptionBardet-biedl syndrome 1
Cds size1815
COG categoryS
BRITEko00000,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187117.4265635-CDS-P-wetherbeei_contig993:134..3111683187117.4265635-CDS-P-wetherbeei_contig993:134..311Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig993 135..311 -
1683187117.4422467-CDS-P-wetherbeei_contig993:588..11121683187117.4422467-CDS-P-wetherbeei_contig993:588..1112Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig993 589..1112 -
1683187117.453295-CDS-P-wetherbeei_contig993:1256..17301683187117.453295-CDS-P-wetherbeei_contig993:1256..1730Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig993 1257..1730 -
1683187117.4639535-CDS-P-wetherbeei_contig993:1775..24151683187117.4639535-CDS-P-wetherbeei_contig993:1775..2415Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig993 1776..2415 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig993.1.1prot_P-wetherbeei_contig993.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig993 135..2415 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig993.1.1

>prot_P-wetherbeei_contig993.1.1 ID=prot_P-wetherbeei_contig993.1.1|Name=mRNA_P-wetherbeei_contig993.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=605bp
NPSPAASKSGPWMHAWHDPLAGLRTHNSCVRFADLYGDGDYRLVVADNSR
LLKVYRGTGVAEVLPLLEQPVALCCFYAAAQLPPLTASIAVAAGPSVYIY
RNMRPYFKFMLPPRAANPAEDAAWAILRTIGGHGGKSRDDADADAVWDAL
SAARDRGVPLSTRAQDFLALSDPEDRRRSFAALASAPPPSLARSSMTCME
TICRSGNGGGGDGVLSSLVLGTEDGEVILLDPPSTIRATVRLPAVPAFLA
PSGALDAEWRIVVACRGGRLFTVKSGESRGSAVVTGTVIDLGAAPCALAR
LQKCIYAATADDRLHSILLKGRRNFALQMPAAITALEPLVTRTSARLLVA
LASGEVRLYMEKALVHSLMPVGRDAVAALRFGRYAREENTMAVVTRGGAV
VIKMLSRRSSLEPSGGSAPGPPPEQDIPLAIPKRTKLHVEQTERERAHGP
AMHRAFQRDLCLLRLQAARGYVKLISAGEMAGTGTAGAPSVRLTAECRGL
GPNFRLRLGIQNAGARSLLNVSVAFVYPRRLYRMECSQFLIPLLLPGLLV
HRSANVTSVDEAGAAGPVRVIILASDPTARGGGGSGGPLASAVINMPPSE
LLDV*
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mRNA from alignment at P-wetherbeei_contig993:135..2415-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig993.1.1 ID=mRNA_P-wetherbeei_contig993.1.1|Name=mRNA_P-wetherbeei_contig993.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2281bp|location=Sequence derived from alignment at P-wetherbeei_contig993:135..2415- (Phaeothamnion wetherbeei SAG_119_79)
AACCCCTCGCCCGCTGCGTCCAAATCGGGGCCGTGGATGCACGCCTGGCA CGATCCCCTCGCCGGCCTCCGCACCCATAACAGCTGCGTGCGCTTCGCCG ACCTCTACGGGGACGGCGACTACCGGCTCGTCGTCGCCGACAACAGCCGT CTGCTGAAGGTATACCGCGGCACCGGCGTCGCCGAGGTGTTGCCGCTTCT CGAGCAGCCGGTCGCGCTCTGCTGCTTTTACGCCGCCGCGCAGCTCCCGC CGCTCACGGCGTCTATCGCCGTAGCCGCCGGTCCGAGTGTCTACATCTAC CGCAACATGCGTCCCTATTTTAAATTCATGCTGCCGCCGCGGGCAGCCAA CCCGGCTGAAGATGCAGCCTGGGCGATACTCCGCACCATTGGCGGCCACG GCGGGAAAAGCCGCGATGATGCCGATGCGGACGCCGTCTGGGACGCGCTT TCTGCCGCCCGCGACCGCGGCGTGCCGCTGTCGACGCGTGCGCAGGACTT TTTGGCGCTGTCCGATCCAGAGGACCGCCGCCGGTCCTTCGCAGCACTGG CGTCCGCGCCGCCGCCATCGCTGGCTCGCTCCTCTATGACGTGCATGGAG ACCATCTGCCGCAGCGGCAACGGCGGCGGCGGCGATGGCGGTGCCGGCGG TGGCAGCAGCGGCGGCGACCGGGGCGACGAGGCAGTGCTTTCCAGCCTCG TTTTGGGCACGGAAGACGGCGAGGTCATCCTGCTCGACCCACCGTCCACG ATTCGAGCGACCGTGCGGCTTCCTGCGGTCCCGGCGTTCCTCGCACCCAG CGGTGCACTCGACGCCGAGTGGCGCATCGTCGTTGCCTGCCGCGGCGGCC GCCTCTTCACAGTCAAGAGCGGCGAGAGCCGCGGTTCCGCCGTCGTCACT GGCACCGTTATCGACCTCGGCGCGGCGCCGTGCGCGCTGGCACGCCTCCA GAAGTGCATCTATGCGGCGACGGCCGACGATCGCCTCCACAGCATTTTGC TGAAGGGGCGGCGCAACTTCGCGTTGCAGATGCCGGCGGCCATCACGGCG CTTGAACCGCTCGTCACGCGGACGTCGGCACGGCTGCTGGTGGCGCTGGC CAGCGGGGAGGTCCGCCTCTACATGGAAAAGGCTCTCGTGCACTCTCTCA TGCCAGTCGGTCACGGCGGTGGCGGCGGCCTCAGCGGCAACTTGGGCGGC AATTTGACAAGCGGCAATTTTTCCGGTGCGGGCTTCGGCGCCGGCACCGG TATTGGTGCGAATAGCGGCAACGGTACCAGCGGAAACAGCGGCGGCGCGG GAGGCAGGGATGCGGTGGCGGCGCTGCGGTTCGGGCGCTACGCGCGAGAA GAGAACACGATGGCCGTCGTGACGCGCGGCGGCGCCGTCGTCATCAAGAT GCTGAGCCGCCGCAGTAGCCTTGAACCCAGCGGAGGCAGCGCCCCCGGCC CGCCGCCAGAGCAGGACATTCCGCTGGCGATCCCGAAAAGGACGAAACTG CACGTGGAGCAGACGGAGCGGGAGCGTGCCCACGGGCCGGCGATGCACCG CGCCTTCCAGCGGGACCTGTGCCTGCTGCGTCTGCAGGCAGCTCGTGGCT ATGTCAAGCTGATCTCTGCCGGGGAGATGGCCGGGACGGGCACGGCCGGC GCGCCGTCGGTCCGGCTGACGGCCGAGTGCAGGGGCCTCGGGCCGAATTT CCGGCTGCGGCTGGGCATCCAAAACGCGGGAGCACGGTCGCTGCTGAACG TATCGGTGGCATTTGTGTACCCGCGCCGGCTGTACCGGATGGAGTGCAGC CAGTTCTTGATCCCGCTGCTACTGCCGGTGAGTGTCAGGAGGAAGGGGAG CGAGCGATTTCTTTGGCTATGATCTGTATCGTTTGTCGACCTCAACTCTG GTTTTGGCGGGTTTCGTAATTCCGCGTGCTCCGTCAAGGAAAATTCTGCA AGAGAGACAGAAAGTTCCTCATTTCTATCACGAACCCGGCTTGTTTGTCC AAAAAGGTTTTGATGAGCAGCAACACCCTGCACATAGCCTGTTTCGCTGG CGCCCTAACTTAAATCCTCGGACGGCCCGCCCGGTTGACCTCCCGCGGCG GCAGGGGCTGCTGGTGCACCGGAGCGCCAACGTTACGAGCGTAGACGAGG CGGGCGCCGCGGGTCCCGTGCGTGTCATCATTCTGGCCTCGGATCCCACG GCGCGAGGCGGCGGTGGCAGCGGCGGACCGCTGGCATCAGCCGTGATCAA CATGCCGCCAAGCGAGCTGCTAGACGTGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig993:135..2415-

>mRNA_P-wetherbeei_contig993.1.1 ID=mRNA_P-wetherbeei_contig993.1.1|Name=mRNA_P-wetherbeei_contig993.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1815bp|location=Sequence derived from alignment at P-wetherbeei_contig993:135..2415- (Phaeothamnion wetherbeei SAG_119_79)
AACCCCTCGCCCGCTGCGTCCAAATCGGGGCCGTGGATGCACGCCTGGCA
CGATCCCCTCGCCGGCCTCCGCACCCATAACAGCTGCGTGCGCTTCGCCG
ACCTCTACGGGGACGGCGACTACCGGCTCGTCGTCGCCGACAACAGCCGT
CTGCTGAAGGTATACCGCGGCACCGGCGTCGCCGAGGTGTTGCCGCTTCT
CGAGCAGCCGGTCGCGCTCTGCTGCTTTTACGCCGCCGCGCAGCTCCCGC
CGCTCACGGCGTCTATCGCCGTAGCCGCCGGTCCGAGTGTCTACATCTAC
CGCAACATGCGTCCCTATTTTAAATTCATGCTGCCGCCGCGGGCAGCCAA
CCCGGCTGAAGATGCAGCCTGGGCGATACTCCGCACCATTGGCGGCCACG
GCGGGAAAAGCCGCGATGATGCCGATGCGGACGCCGTCTGGGACGCGCTT
TCTGCCGCCCGCGACCGCGGCGTGCCGCTGTCGACGCGTGCGCAGGACTT
TTTGGCGCTGTCCGATCCAGAGGACCGCCGCCGGTCCTTCGCAGCACTGG
CGTCCGCGCCGCCGCCATCGCTGGCTCGCTCCTCTATGACGTGCATGGAG
ACCATCTGCCGCAGCGGCAACGGCGGCGGCGGCGATGGCGTGCTTTCCAG
CCTCGTTTTGGGCACGGAAGACGGCGAGGTCATCCTGCTCGACCCACCGT
CCACGATTCGAGCGACCGTGCGGCTTCCTGCGGTCCCGGCGTTCCTCGCA
CCCAGCGGTGCACTCGACGCCGAGTGGCGCATCGTCGTTGCCTGCCGCGG
CGGCCGCCTCTTCACAGTCAAGAGCGGCGAGAGCCGCGGTTCCGCCGTCG
TCACTGGCACCGTTATCGACCTCGGCGCGGCGCCGTGCGCGCTGGCACGC
CTCCAGAAGTGCATCTATGCGGCGACGGCCGACGATCGCCTCCACAGCAT
TTTGCTGAAGGGGCGGCGCAACTTCGCGTTGCAGATGCCGGCGGCCATCA
CGGCGCTTGAACCGCTCGTCACGCGGACGTCGGCACGGCTGCTGGTGGCG
CTGGCCAGCGGGGAGGTCCGCCTCTACATGGAAAAGGCTCTCGTGCACTC
TCTCATGCCAGTCGGCAGGGATGCGGTGGCGGCGCTGCGGTTCGGGCGCT
ACGCGCGAGAAGAGAACACGATGGCCGTCGTGACGCGCGGCGGCGCCGTC
GTCATCAAGATGCTGAGCCGCCGCAGTAGCCTTGAACCCAGCGGAGGCAG
CGCCCCCGGCCCGCCGCCAGAGCAGGACATTCCGCTGGCGATCCCGAAAA
GGACGAAACTGCACGTGGAGCAGACGGAGCGGGAGCGTGCCCACGGGCCG
GCGATGCACCGCGCCTTCCAGCGGGACCTGTGCCTGCTGCGTCTGCAGGC
AGCTCGTGGCTATGTCAAGCTGATCTCTGCCGGGGAGATGGCCGGGACGG
GCACGGCCGGCGCGCCGTCGGTCCGGCTGACGGCCGAGTGCAGGGGCCTC
GGGCCGAATTTCCGGCTGCGGCTGGGCATCCAAAACGCGGGAGCACGGTC
GCTGCTGAACGTATCGGTGGCATTTGTGTACCCGCGCCGGCTGTACCGGA
TGGAGTGCAGCCAGTTCTTGATCCCGCTGCTACTGCCGGGGCTGCTGGTG
CACCGGAGCGCCAACGTTACGAGCGTAGACGAGGCGGGCGCCGCGGGTCC
CGTGCGTGTCATCATTCTGGCCTCGGATCCCACGGCGCGAGGCGGCGGTG
GCAGCGGCGGACCGCTGGCATCAGCCGTGATCAACATGCCGCCAAGCGAG
CTGCTAGACGTGTGA
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