mRNA_P-wetherbeei_contig9898.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig9898.1.1 vs. uniprot
Match: A0A355UTG9_9CYAN (Uncharacterized protein n=1 Tax=Cyanobacteria bacterium UBA8530 TaxID=2055790 RepID=A0A355UTG9_9CYAN) HSP 1 Score: 200 bits (509), Expect = 1.280e-57 Identity = 143/325 (44.00%), Postives = 184/325 (56.62%), Query Frame = 1 Query: 1 RFEQKPLMAVANWGRFLCLTTLLYCLPRGYSLWVYLLLSLLLGACGALFTPARAAFLRRLLAGEDLLEAAALEGTVGFLLRLIAPAVIGVVMVLSSARLGIFVDSLFYLGSIAALWPRWVTGPWVGAESRDVLGDLVGGWRAIVASETLRRLLMLDFLTSLIGMAAWSTTAAFLETVAHVGAVNTGWLQASMGFSGALGTRLMAGRAATPWRVAWLLAG-IAGTYVLLAQATTLGGIVGVWFLRGLVIGSLVVLIAQEMAAHVPAQVMGRVQSAWDQVACLACFAGSMSTPWLLRHCGAQGSFQLFAAVMVAFVVVWWGRLLRAR 972 RFEQ+ +M A+ R L LL L S L S+ GA GA F PARAAF+RR+L G DL A ALEGTV FL RLI+PA++G+++ + GI D + Y +I L PRWV G + E G GW I+ S LR LL LD L+GMAA+S++ AFL + A + WL A+ G +GALGT+L AGR L G +A TY+L+ A +LG +V +W LRG G+L VLI Q + QVMGRV +AW VACLA F GS STP+LLR G+ SF LF + +A + G + AR Sbjct: 78 RFEQRRVMIAADSARVCFLALLLLVLAFHASFGALLAASVAFGASGAFFMPARAAFMRRVLEGADLERAIALEGTVAFLTRLISPALMGLLLAILPPVAGIAFDLVAYASAIVLLAPRWVRGT-LSVEKAADEGAWQEGWLCILRSVPLRSLLGLDLALCLVGMAAFSSSVAFLSEHLQLSAQSNCWLLAATGLTGALGTQL-AGRLGRGGGTYAALTGLVALTYLLVPHAHSLGVMVAMWGLRGFAYGALGVLINQRIVQEAAPQVMGRVNAAWSLVACLAAFFGSASTPFLLRTIGSAQSFTLFG-ITLASAAILMGAQVAAR 399
BLAST of mRNA_P-wetherbeei_contig9898.1.1 vs. uniprot
Match: A0A1G1KKZ7_9BACT (MFS transporter n=3 Tax=unclassified Candidatus Omnitrophica TaxID=1047005 RepID=A0A1G1KKZ7_9BACT) HSP 1 Score: 70.1 bits (170), Expect = 9.350e-10 Identity = 51/177 (28.81%), Postives = 89/177 (50.28%), Query Frame = 1 Query: 91 SLWVYLLLSLLLGACGALFTPARAAFLRRLLAG-EDLLEAAALEGTVGFLLRLIAPAVIGVVMVLSSARLGIFVDSLFYLGSIAALWPRWVTGPWVGAESRDVLGDLVGGWRAIVASETLRRLLMLDFLTSLIGMAAWSTTAAFLETVAHVGAVNTGWLQASMGFSGALGTRLMAGR 618 S+W + L + LG GA PAR AF+ +++ ED+ A AL + RLI P++ G+++ + + V+ + Y+ IAAL +T + + + ++ L G+ + S ++R +L+L L SL+GM+ F + + H G G+L AS G +G +A R Sbjct: 109 SVWYIIALGIFLGIIGAFDAPARHAFVVEMVSKREDVNNAVALNSLIFNAARLIGPSIAGILVAIIGEGMCFLVNGISYIAVIAALLSMRITPKIIEKQHKHIIHGLKEGFSYVFGSASMRSILLLTGLVSLMGMSYVVLMPIFAKDILHGGPNTLGFLMASSGLGALIGAVYLASR 285
BLAST of mRNA_P-wetherbeei_contig9898.1.1 vs. uniprot
Match: A0A521KD12_9CHLR (MFS transporter n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A521KD12_9CHLR) HSP 1 Score: 63.5 bits (153), Expect = 1.430e-7 Identity = 82/322 (25.47%), Postives = 133/322 (41.30%), Query Frame = 1 Query: 4 FEQKPLMAVANWGRFLCLTTLLYCLPRGYSLWVYLLLSLLLGACGALFTPARAAFLRRLLAGEDLLEAAALEGTVGFLLRLIAPAVIGVVMVLSSARLGIFVDSLFYLGSIAALWPRWVTGPWVGAESRDVLGDLVGGWRAIVASETLRRLLMLDFLTSLIGMAAWSTTAAFLETVAHVGAVNTGWLQASMGFSGALGTRLM-----AGRAATPWRVAWLLAGI---AGTYVLLAQATTLGGIVGVWFLRGLVIGSLVVLIAQEMAAHVPAQVMGRVQSAWDQVACLACFAGSMSTPWLLRHCGAQGSFQLFAAVMVAFVVV 945 F + L AV+++ L + T ++W+ ++ + GA AL PA +A L RL+ + A AL TV +R++ PA+ G+++ + FV + + S L + V V G ++ G R IV + L F TS+ G + + F + + +VG GW++A+ G G LGT + GRA VA L GI A Y + T + + F G V + L + VP ++ GRV W +A G + L GA + A + AF ++ Sbjct: 97 FWSQSLTAVSSFALALAVIT------GSVNIWMVIVWGIFTGALAALANPAYSAILPRLIEMRSMASAVALVSTVWNTMRVVGPALAGLLIAVIGIGQAFFVTAAGFALSTVLL--QMVVLKPVAPRRPGPDGGMLEGIRHIVREPIFLATIGLSFFTSVFGGSYQNLLPIFADDILNVGPQGFGWMEAAAGIGGFLGTFAIIRVGTGGRAGLTMSVAAALFGICIAAFAYSRIFPLTLI-----LLFAGGFVSSMYLNLGMTTLQLRVPDELRGRVMGVWSMTYFMAQLGG-LPAGALAHWIGAPAAVATGALSVTAFALI 404
BLAST of mRNA_P-wetherbeei_contig9898.1.1 vs. uniprot
Match: A0A7X8ULR8_9BACT (MFS transporter n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7X8ULR8_9BACT) HSP 1 Score: 61.6 bits (148), Expect = 6.220e-7 Identity = 76/289 (26.30%), Postives = 127/289 (43.94%), Query Frame = 1 Query: 91 SLWVYLLLSLLLGACGALFTPARAAFLRRLLAGE-DLLEAAALEGTVGFLLRLIAPAVIGVVMVLSSARLGIFVDSLFYLGSIAALWPRWVTGPWVGAESRDVLGD-LVGGWRAIVASETLRRLLMLDFLTSLIGMAAWSTTAAFLETVAHVGAVNTGWLQASMGFSGALGTRLMAGRAAT-----PWRVAWLLAGIAGTYVLLAQATTLGGIVGVWFLRGLVIGSLVVLIAQEMAAHVPAQVMGRVQSAWDQVACLACFAGSMSTPWLLRHCGAQGSFQLFAAVMVAF 936 +W + LSL LG P R AF+ +L DL A A+ V + RL+ P + GV++ L ++++ +L I ALW T + R +G L+ G+R +S T+R LL+L L SL+G+ + AF+ T G G +Q + G G L+A R++ +A LL G G +LA + ++ I+ + + G ++ I + V + GRV S + G++ W+ GA+G+ + A + F Sbjct: 115 QVWHIVTLSLTLGLVNGFDMPLRQAFVVEMLEDRRDLPNAIAMNSLVFNMTRLVGPVLAGVLVALWGEGYAFLINAMTFLTVICALWMMKFTRKELPHRRRRPVGRRLMEGFRYSASSVTIRNLLLLLALVSLMGIPYGTLLPAFVATNLSRGPEMLGLVQGAAGLGAVCGAILLACRSSVLGLGRTIAMASLLFG--GALTILAMSGSIALILALMTVVGFGNMTITASINTILQTVVEDRRRGRVMSLYTMAVIGMSTLGALLMGWIASGIGARGALAIGGASCLVF 401
BLAST of mRNA_P-wetherbeei_contig9898.1.1 vs. uniprot
Match: A0A3L7X3M5_9CHLR (MFS transporter n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3L7X3M5_9CHLR) HSP 1 Score: 58.5 bits (140), Expect = 6.170e-6 Identity = 70/291 (24.05%), Postives = 121/291 (41.58%), Query Frame = 1 Query: 91 SLWVYLLLSLLLGACGALFTPARAAFLRRLLAGEDLLEAAALEGTVGFLLRLIAPAVIGVVMVLSSARLGIFVDSLFYLGSIAALWPRWVTGPWVGAESRDVLGDLVGGWRAIVASETLRRLLMLDFLTSLIGMAAWSTTAAFLETVAHVGAVNTGWLQASMGFSGALGTR--LMAGRAATPWRVAWLLAGIAGTYVL-LAQATTLGGIVGVWFLRGLVIGSLVVLIAQEMAAHVPAQVMGRVQSAWDQVACLACFAG---SMSTPWLLRHCGAQGSFQLFAAVMVAFVVV 945 ++W+ + + GA AL PA +A L RL+ + A A+ TV +R++ PA+ GV++ + FV + + +I+ + + V + G ++ G R I + L F TS+ G + + F + + VG GW++A+ G G LGT + G V L A + G ++ A + + + F G V + L + VP ++ GRV W +A G + WL GA + L A + AF ++ Sbjct: 120 NIWMVIAWGVFTGALAALANPAYSAILPRLIEMRTMASAVAMVSTVWNTMRVVGPALAGVLIAVIGIGQAFFVTAAGF--AISTVLVQVVPLKPIAPRPPGPDGGMLEGIRHIAREPIFLATIGLSFFTSVFGGSYQALLPIFADDILDVGPTGFGWMEAAAGIGGFLGTFAIIRVGTGGRAGMVMSLAAALFGIFIAGFAYSRNFPLSLILLFAGGFVSSMYLNLGMTTLQLRVPDELRGRVMGVWSMTYFMAQLGGLPAGLVAEWL----GAPAAVALGALSVTAFALI 404
BLAST of mRNA_P-wetherbeei_contig9898.1.1 vs. uniprot
Match: A0A2W1AA67_9CHLR (MFS family permease n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2W1AA67_9CHLR) HSP 1 Score: 56.2 bits (134), Expect = 3.480e-5 Identity = 69/258 (26.74%), Postives = 108/258 (41.86%), Query Frame = 1 Query: 91 SLWVYLLLSLLLGACGALFTPARAAFLRRLLAGEDLLEAAALEGTVGFLLRLIAPAVIGVVMVLSSARLGIFVDSLFYLGSIAALWPRWVTGPWVGAESRDVLGDLVGGWRAIVASETLRRLLMLDFLTSLIGMAAWSTTAAFLETVAHVGAVNTGWLQASMGFSGALGTRLMAGRAATPWRVAWLLAGIAG---TYVLLAQATTLGGIVGVWFLRGLVIGSLVVLIAQEMAAHVPAQVMGRVQSAWDQVACLACFAG 855 LW+ ++ SL+ G AL PA+ A L +L+ + A AL GTV +R+I PA+ GVV+ + FV ++ Y + L+ T P A + G ++ G R I ++ L F TS+ G + F E + VG G L+ + G LGT + A R +L+G A A + + + FL G G + + + VP ++ GRV W L+ G Sbjct: 121 QLWMVVVWSLVTGVLAALVAPAQQAILPQLIDMRAIASAVALNGTVWNSMRIIGPAIAGVVIAVVGIGQAFFVTTVGYAIASVLLFTL-KTKP--RATNYRGGGGMMAGVRFIFNDRLFLAVIGLSFFTSVFGGSYQVLLVFFSEDILRVGPTGFGLLEGAAGVGAILGTLSIIKIGAGRHRGFVILSGAAAFGLCVAAFAASKVMSLSMATLFLAGFSSGIYLNVGMTALQMQVPDELRGRVMGIWSMTWFLSAVGG 375 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9898.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig9898.1.1 >prot_P-wetherbeei_contig9898.1.1 ID=prot_P-wetherbeei_contig9898.1.1|Name=mRNA_P-wetherbeei_contig9898.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=318bp MAVANWGRFLCLTTLLYCLPRGYSLWVYLLLSLLLGACGALFTPARAAFLback to top mRNA from alignment at P-wetherbeei_contig9898:1..975+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig9898.1.1 ID=mRNA_P-wetherbeei_contig9898.1.1|Name=mRNA_P-wetherbeei_contig9898.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=975bp|location=Sequence derived from alignment at P-wetherbeei_contig9898:1..975+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig9898:1..975+ >mRNA_P-wetherbeei_contig9898.1.1 ID=mRNA_P-wetherbeei_contig9898.1.1|Name=mRNA_P-wetherbeei_contig9898.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=954bp|location=Sequence derived from alignment at P-wetherbeei_contig9898:1..975+ (Phaeothamnion wetherbeei SAG_119_79)back to top |