mRNA_P-wetherbeei_contig9656.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig9656.1.1
Unique NamemRNA_P-wetherbeei_contig9656.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig9656.1.1 vs. uniprot
Match: A0A7S0AIT7_9DINO (Hypothetical protein n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0AIT7_9DINO)

HSP 1 Score: 376 bits (965), Expect = 1.560e-126
Identity = 183/231 (79.22%), Postives = 199/231 (86.15%), Query Frame = 1 
Query:    1 MWITNGTADGVSTGDAFLVYAKTGPRPRDVSLFLVEKGMAGFRLGQKIQDKCGMRASMTAELVFEDVHVPAANLVGEENGAVLCMMRNLEIERVTLAAMSLGIARRCIETMNGYSRERRAFGSPIASFGQIQRHVAESYAEYMAGRSYTYNVAAGLDLGSVGNGLDADGAKLFCSVMAKNVADRAIQTLGGYGYCGEYQVERLWRDAKLIEIGGGTLEAHHKNMMRDLRKR 693
            MWITNGT DG STGDA+LVYAKTG  PRDVSLFLVEKGM GF LGQKI DKCGMRASMTAELVF+D HVPA NLVG+ENGA LCMMRNLEIERV LAAMSLGIARRC+E MN Y+RER+AFGS + +FGQIQR +AESYAEYMAGR+Y Y  A  L L SVGNGLDADG KLFC  M KNVADRAIQ +GGYGY GEY VERLWRD+KL+EIGGGT EAHHKNM+RDL ++
Sbjct:  259 MWITNGTIDGESTGDAYLVYAKTGKGPRDVSLFLVEKGMPGFSLGQKIHDKCGMRASMTAELVFQDCHVPATNLVGQENGAALCMMRNLEIERVALAAMSLGIARRCVEEMNKYARERQAFGSHLNAFGQIQRFIAESYAEYMAGRAYVYQTAKELKLESVGNGLDADGVKLFCGAMGKNVADRAIQVMGGYGYVGEYNVERLWRDSKLLEIGGGTNEAHHKNMVRDLSRK 489
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BLAST of mRNA_P-wetherbeei_contig9656.1.1 vs. uniprot
Match: D7G5A3_ECTSI (Isovaleryl-CoA dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5A3_ECTSI)

HSP 1 Score: 374 bits (960), Expect = 1.650e-126
Identity = 177/230 (76.96%), Postives = 202/230 (87.83%), Query Frame = 1 
Query:    1 MWITNGTADGVSTGDAFLVYAKTGPRPRDVSLFLVEKGMAGFRLGQKIQDKCGMRASMTAELVFEDVHVPAANLVGEENGAVLCMMRNLEIERVTLAAMSLGIARRCIETMNGYSRERRAFGSPIASFGQIQRHVAESYAEYMAGRSYTYNVAAGLDLGSVGNGLDADGAKLFCSVMAKNVADRAIQTLGGYGYCGEYQVERLWRDAKLIEIGGGTLEAHHKNMMRDLRK 690
            MWITNGT DG++TGD FLVYA+TGP  +D+S+F+VEKGM GF LGQKI+ KCGMRASMTAELVF+ V V   +LVG+ENGA+LCMMRNLEIERVTLAAM +GIARRCIE MN Y +ER+AFGSPI SFGQIQ+H+A+SYAEYMAG+ Y Y VAA LDL S GNGLDADG KL+C+ MAKNVADRA+Q LGGYGYC EYQ+ERLWRDAKL+EIGGGTLEAHHKNM+RDL K
Sbjct:  206 MWITNGTTDGLTTGDVFLVYARTGPGRQDISMFIVEKGMPGFELGQKIEGKCGMRASMTAELVFDGVEVGRESLVGDENGAMLCMMRNLEIERVTLAAMGVGIARRCIEAMNTYGKERKAFGSPINSFGQIQKHIADSYAEYMAGKHYLYAVAANLDLSSTGNGLDADGTKLYCTTMAKNVADRAMQVLGGYGYCDEYQIERLWRDAKLLEIGGGTLEAHHKNMVRDLAK 435
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BLAST of mRNA_P-wetherbeei_contig9656.1.1 vs. uniprot
Match: A0A7S2S2Z9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2Z9_9STRA)

HSP 1 Score: 372 bits (954), Expect = 1.730e-125
Identity = 180/230 (78.26%), Postives = 202/230 (87.83%), Query Frame = 1 
Query:    1 MWITNGTADGVSTGDAFLVYAKTGPRPRDVSLFLVEKGMAGFRLGQKIQDKCGMRASMTAELVFEDVHVPAANLVGEENGAVLCMMRNLEIERVTLAAMSLGIARRCIETMNGYSRERRAFGSPIASFGQIQRHVAESYAEYMAGRSYTYNVAAGLDLGSVGNGLDADGAKLFCSVMAKNVADRAIQTLGGYGYCGEYQVERLWRDAKLIEIGGGTLEAHHKNMMRDLRK 690
            MWITNGT DGVSTGDAFLVYA+TG    DVS+FLVEKGM GF LGQKI+DKCGMRASMTAELVF+ V VPA NLVG+E+GA LCMMRNLEIER+TLAAMSLGIARR IE MN YS+ER+AFG  + ++GQIQRH+A+SYAE+MAGRSY YNVA  L+L S GNGLDADG KLFC VM KNVADRAIQ LGGYG+ GEYQVE+LWRD+KL+EIGGGT EAHHKNM+RDL+K
Sbjct:  214 MWITNGTIDGVSTGDAFLVYARTGEGRNDVSMFLVEKGMEGFSLGQKIEDKCGMRASMTAELVFDGVKVPATNLVGQEHGAALCMMRNLEIERITLAAMSLGIARRSIEVMNNYSQERQAFGKSLNNYGQIQRHIADSYAEFMAGRSYVYNVARQLELSSYGNGLDADGVKLFCGVMGKNVADRAIQVLGGYGFVGEYQVEQLWRDSKLLEIGGGTNEAHHKNMVRDLKK 443
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BLAST of mRNA_P-wetherbeei_contig9656.1.1 vs. uniprot
Match: A0A7S1RAK0_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RAK0_ALECA)

HSP 1 Score: 365 bits (936), Expect = 2.150e-123
Identity = 180/231 (77.92%), Postives = 197/231 (85.28%), Query Frame = 1 
Query:    1 MWITNGTADGVSTGDAFLVYAKTGPRPRDVSLFLVEKGMAGFRLGQKIQDKCGMRASMTAELVFEDVHVPAANLVGEENGAVLCMMRNLEIERVTLAAMSLGIARRCIETMNGYSRERRAFGSPIASFGQIQRHVAESYAEYMAGRSYTYNVAAGLDLGSVGNGLDADGAKLFCSVMAKNVADRAIQTLGGYGYCGEYQVERLWRDAKLIEIGGGTLEAHHKNMMRDLRKR 693
            MWITNGT DG STGDA+LVYAKTG    DVSLFLVEKG  GF LGQKI DKCGMRASMTAELVF+D  VPAANLVG+E GA LCMMRNLEIERVTLAAMSLGIARRC E MN Y+RER+AFGS + +FGQ+QR +AESYAEYMAGR+Y Y  A  L L +VGNGLDADG KL+C VMAKNVADRAIQ LGGYGY GEY VERLWRD+KL+EIGGGT EAHHKNM+RDL ++
Sbjct:  169 MWITNGTLDGESTGDAYLVYAKTGQGRGDVSLFLVEKGAPGFSLGQKIHDKCGMRASMTAELVFQDCRVPAANLVGKEGGAALCMMRNLEIERVTLAAMSLGIARRCTEEMNRYARERQAFGSHLNAFGQMQRFIAESYAEYMAGRAYVYQTAKDLKLDTVGNGLDADGVKLYCGVMAKNVADRAIQVLGGYGYVGEYNVERLWRDSKLLEIGGGTNEAHHKNMVRDLSRK 399
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BLAST of mRNA_P-wetherbeei_contig9656.1.1 vs. uniprot
Match: A0A7S2HS58_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HS58_9STRA)

HSP 1 Score: 365 bits (937), Expect = 5.210e-123
Identity = 175/235 (74.47%), Postives = 203/235 (86.38%), Query Frame = 1 
Query:    1 MWITNGTADGVSTGDAFLVYAKTGPRPRDVSLFLVEKGMAGFRLGQKIQDKCGMRASMTAELVFEDVHVPAANLVGEENGAVLCMMRNLEIERVTLAAMSLGIARRCIETMNGYSRERRAFGSPIASFGQIQRHVAESYAEYMAGRSYTYNVAAGLDLGSVGNGLDADGAKLFCSVMAKNVADRAIQTLGGYGYCGEYQVERLWRDAKLIEIGGGTLEAHHKNMMRDLRKRPHLD 705
            MWITNGT D ++TGDA+ VYA+TG    DVS+FLVEKGM GF LGQKI+DKCGMRASMTAELVF++VH+PA++LVG+ENGA +CMMRNLEIERVTLAAMSLGIARR IE MN Y++ER AFG+ + SFGQ QRH+A+SYAEYMAGRSY YNVA  LDL + GNGL+ADG KLFC VM KNVADRAIQ LGGYGY GEY VE+LWRDAKL+EIGGGT E+HHKNM+RDL++   L+
Sbjct:  208 MWITNGTLDNLTTGDAYCVYARTGEGRADVSMFLVEKGMKGFSLGQKIEDKCGMRASMTAELVFDNVHLPASSLVGKENGAAICMMRNLEIERVTLAAMSLGIARRSIEVMNSYAKEREAFGASLNSFGQTQRHIADSYAEYMAGRSYAYNVARELDLSTTGNGLNADGVKLFCGVMGKNVADRAIQVLGGYGYVGEYAVEQLWRDAKLLEIGGGTNESHHKNMIRDLKRIDRLE 442
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BLAST of mRNA_P-wetherbeei_contig9656.1.1 vs. uniprot
Match: A0A813I6N8_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813I6N8_POLGL)

HSP 1 Score: 354 bits (909), Expect = 1.260e-121
Identity = 171/231 (74.03%), Postives = 195/231 (84.42%), Query Frame = 1 
Query:    1 MWITNGTADGVSTGDAFLVYAKTGPRPRDVSLFLVEKGMAGFRLGQKIQDKCGMRASMTAELVFEDVHVPAANLVGEENGAVLCMMRNLEIERVTLAAMSLGIARRCIETMNGYSRERRAFGSPIASFGQIQRHVAESYAEYMAGRSYTYNVAAGLDLGSVGNGLDADGAKLFCSVMAKNVADRAIQTLGGYGYCGEYQVERLWRDAKLIEIGGGTLEAHHKNMMRDLRKR 693
            MWITNGT DG +TGDA+LVYA+TG   +++SLFLVEKG  GF LGQKIQDKCGMRASMTAELVF+D  VPAANLVG E  A +CMMRNLEIERV LAAMSLGIARRC+E MN Y++ER+AFGS + SFGQ+QR +AESYAEY AGRSY Y  A  LDL +VGNGLDADG KL+C VM KNVADRA+Q +GGYGY  EY VERLWRD+KL+EIGGGT EAHHKNM+RDL ++
Sbjct:   11 MWITNGTLDGETTGDAYLVYARTGSTAKEISLFLVEKGTKGFSLGQKIQDKCGMRASMTAELVFQDCRVPAANLVGVEGKAAMCMMRNLEIERVALAAMSLGIARRCVEDMNRYAKERQAFGSALNSFGQMQRLIAESYAEYQAGRSYVYQTAKYLDLDTVGNGLDADGVKLYCGVMGKNVADRAMQVMGGYGYVAEYNVERLWRDSKLLEIGGGTNEAHHKNMVRDLSRK 241
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BLAST of mRNA_P-wetherbeei_contig9656.1.1 vs. uniprot
Match: A0A812R334_9DINO (IVD protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812R334_9DINO)

HSP 1 Score: 354 bits (909), Expect = 1.070e-119
Identity = 173/231 (74.89%), Postives = 194/231 (83.98%), Query Frame = 1 
Query:    1 MWITNGTADGVSTGDAFLVYAKTGPRPRDVSLFLVEKGMAGFRLGQKIQDKCGMRASMTAELVFEDVHVPAANLVGEENGAVLCMMRNLEIERVTLAAMSLGIARRCIETMNGYSRERRAFGSPIASFGQIQRHVAESYAEYMAGRSYTYNVAAGLDLGSVGNGLDADGAKLFCSVMAKNVADRAIQTLGGYGYCGEYQVERLWRDAKLIEIGGGTLEAHHKNMMRDLRKR 693
            MWITNGT DG  TGDA+LVYA+TG   RD+SLFLVEKG  GF LGQKIQDKCGMRASMTAELVF+D  VPAA+LVG+E  A LCMMRNLEIERV LA+MSLGIARRC+E MN Y+++R+AFGS + SFGQIQR +AESYAEY AGRSY Y  A  L+L SVGNGLDADG KL+C  M K VADRAIQ LGGYGY GEY VERLWRDAKL+EIGGGT EAHHKN++RDL ++
Sbjct:  141 MWITNGTVDGKETGDAYLVYARTGSTSRDISLFLVEKGTKGFSLGQKIQDKCGMRASMTAELVFQDCRVPAAHLVGQEGKAALCMMRNLEIERVALASMSLGIARRCVEEMNRYAKDRKAFGSQLNSFGQIQRFIAESYAEYQAGRSYVYQTAKHLNLESVGNGLDADGVKLYCGHMGKMVADRAIQVLGGYGYVGEYNVERLWRDAKLLEIGGGTNEAHHKNIVRDLSRQ 371
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BLAST of mRNA_P-wetherbeei_contig9656.1.1 vs. uniprot
Match: A0A835YPS6_9STRA (Isovaleryl-CoA dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPS6_9STRA)

HSP 1 Score: 353 bits (905), Expect = 6.870e-119
Identity = 169/230 (73.48%), Postives = 197/230 (85.65%), Query Frame = 1 
Query:    1 MWITNGTADGVSTGDAFLVYAKTGPRPRDVSLFLVEKGMAGFRLGQKIQDKCGMRASMTAELVFEDVHVPAANLVGEENGAVLCMMRNLEIERVTLAAMSLGIARRCIETMNGYSRERRAFGSPIASFGQIQRHVAESYAEYMAGRSYTYNVAAGLDLGSVGNGLDADGAKLFCSVMAKNVADRAIQTLGGYGYCGEYQVERLWRDAKLIEIGGGTLEAHHKNMMRDLRK 690
            MWITNGT DG  TGDAFLVYA+TG  PRD+S F+VE+GMAGF LG K++DKCGMRASMTAELVFEDV VP  NLVGEE GA+L M++NLEIER+ L A+SLGIARRCI+ MN YS ER AFG PI+S+GQ+QRH+AESYAEYMAGR+YTY++AA LDL + G GLD D  KL+ + M KNVADRA+Q LGG GY G+YQVERLWRDAKL+EIGGGTLEAHHKN++RDLR+
Sbjct:  156 MWITNGTVDGRDTGDAFLVYARTGRGPRDISTFIVERGMAGFSLGTKVEDKCGMRASMTAELVFEDVRVPRENLVGEEGGALLSMVKNLEIERLALGAISLGIARRCIDIMNKYSMERVAFGKPISSYGQVQRHIAESYAEYMAGRAYTYSIAANLDLTTHGCGLDTDAVKLYTATMGKNVADRAMQVLGGNGYVGDYQVERLWRDAKLMEIGGGTLEAHHKNIVRDLRR 385
[Close]
BLAST of mRNA_P-wetherbeei_contig9656.1.1 vs. uniprot
Match: A0A813H4N2_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813H4N2_POLGL)

HSP 1 Score: 354 bits (909), Expect = 8.550e-119
Identity = 171/231 (74.03%), Postives = 195/231 (84.42%), Query Frame = 1 
Query:    1 MWITNGTADGVSTGDAFLVYAKTGPRPRDVSLFLVEKGMAGFRLGQKIQDKCGMRASMTAELVFEDVHVPAANLVGEENGAVLCMMRNLEIERVTLAAMSLGIARRCIETMNGYSRERRAFGSPIASFGQIQRHVAESYAEYMAGRSYTYNVAAGLDLGSVGNGLDADGAKLFCSVMAKNVADRAIQTLGGYGYCGEYQVERLWRDAKLIEIGGGTLEAHHKNMMRDLRKR 693
            MWITNGT DG +TGDA+LVYA+TG   +++SLFLVEKG  GF LGQKIQDKCGMRASMTAELVF+D  VPAANLVG E  A +CMMRNLEIERV LAAMSLGIARRC+E MN Y++ER+AFGS + SFGQ+QR +AESYAEY AGRSY Y  A  LDL +VGNGLDADG KL+C VM KNVADRA+Q +GGYGY  EY VERLWRD+KL+EIGGGT EAHHKNM+RDL ++
Sbjct:  205 MWITNGTLDGETTGDAYLVYARTGSTAKEISLFLVEKGTKGFSLGQKIQDKCGMRASMTAELVFQDCRVPAANLVGVEGKAAMCMMRNLEIERVALAAMSLGIARRCVEDMNRYAKERQAFGSALNSFGQMQRLIAESYAEYQAGRSYVYQTAKYLDLDTVGNGLDADGVKLYCGVMGKNVADRAMQVMGGYGYVAEYSVERLWRDSKLLEIGGGTNEAHHKNMVRDLSRK 435
[Close]
BLAST of mRNA_P-wetherbeei_contig9656.1.1 vs. uniprot
Match: A0A6T7DYR8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A6T7DYR8_9STRA)

HSP 1 Score: 353 bits (905), Expect = 1.280e-118
Identity = 170/230 (73.91%), Postives = 198/230 (86.09%), Query Frame = 1 
Query:    1 MWITNGTADGVSTGDAFLVYAKTGPRPRDVSLFLVEKGMAGFRLGQKIQDKCGMRASMTAELVFEDVHVPAANLVGEENGAVLCMMRNLEIERVTLAAMSLGIARRCIETMNGYSRERRAFGSPIASFGQIQRHVAESYAEYMAGRSYTYNVAAGLDLGSVGNGLDADGAKLFCSVMAKNVADRAIQTLGGYGYCGEYQVERLWRDAKLIEIGGGTLEAHHKNMMRDLRK 690
            MWITNGT DG +TGDA+L+YA+TG +  +VS+FLV+K M GF LGQKI+DK GMRASMTAE+VF++V VPA NLVGEE+GA LCMMRNLEIER+ LAAMSLGIARR +E MN Y+ ER+AFG  I SFGQ+QRH+A+SYAEYMAGR+YTYNVA  LDL S GNGLDADG KLFC+ M K+VADRAIQ LGG GY GEY VE+LWRDAKL+EIGGGT EAHHKNM+RDL++
Sbjct:  174 MWITNGTLDGETTGDAYLIYARTGEKRSEVSMFLVDKNMPGFTLGQKIEDKLGMRASMTAEIVFDNVVVPAENLVGEEHGAALCMMRNLEIERIALAAMSLGIARRSVEVMNNYAAERQAFGESINSFGQMQRHIADSYAEYMAGRAYTYNVARHLDLASYGNGLDADGVKLFCAKMGKDVADRAIQVLGGNGYVGEYHVEQLWRDAKLLEIGGGTNEAHHKNMVRDLKR 403
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9656.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S0AIT7_9DINO1.560e-12679.22Hypothetical protein n=1 Tax=Pyrodinium bahamense ... [more]
D7G5A3_ECTSI1.650e-12676.96Isovaleryl-CoA dehydrogenase n=1 Tax=Ectocarpus si... [more]
A0A7S2S2Z9_9STRA1.730e-12578.26Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1RAK0_ALECA2.150e-12377.92Hypothetical protein n=1 Tax=Alexandrium catenella... [more]
A0A7S2HS58_9STRA5.210e-12374.47Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A813I6N8_POLGL1.260e-12174.03Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A812R334_9DINO1.070e-11974.89IVD protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxI... [more]
A0A835YPS6_9STRA6.870e-11973.48Isovaleryl-CoA dehydrogenase n=1 Tax=Tribonema min... [more]
A0A813H4N2_POLGL8.550e-11974.03Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A6T7DYR8_9STRA1.280e-11873.91Hypothetical protein n=1 Tax=Florenciella parvula ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9656contigP-wetherbeei_contig9656:3..1808 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G5A3
Preferred nameIVD
PFAMsAcyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
Model size708
Max annot lvl2759|Eukaryota
KEGG rclassRC00246
KEGG koko:K00253
KEGG ReactionR04095
KEGG Pathwayko00280,ko01100,map00280,map01100
KEGG ModuleM00036
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0003674,GO:0003824,GO:0003853,GO:0003995,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005740,GO:0005759,GO:0006082,GO:0006139,GO:0006163,GO:0006195,GO:0006520,GO:0006551,GO:0006552,GO:0006629,GO:0006631,GO:0006635,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008470,GO:0009056,GO:0009058,GO:0009062,GO:0009063,GO:0009081,GO:0009083,GO:0009109,GO:0009117,GO:0009150,GO:0009154,GO:0009166,GO:0009259,GO:0009261,GO:0009987,GO:0016020,GO:0016042,GO:0016043,GO:0016054,GO:0016491,GO:0016627,GO:0017076,GO:0018130,GO:0019395,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0022607,GO:0030258,GO:0030554,GO:0031090,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0033539,GO:0033865,GO:0033869,GO:0033875,GO:0034031,GO:0034032,GO:0034034,GO:0034404,GO:0034440,GO:0034641,GO:0034654,GO:0034655,GO:0035337,GO:0035383,GO:0035639,GO:0036094,GO:0036115,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043603,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044270,GO:0044271,GO:0044273,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046395,GO:0046434,GO:0046483,GO:0046700,GO:0051186,GO:0051187,GO:0051259,GO:0051260,GO:0055086,GO:0055114,GO:0065003,GO:0070013,GO:0071704,GO:0071840,GO:0072329,GO:0072521,GO:0072523,GO:0097159,GO:0097367,GO:1901135,GO:1901136,GO:1901265,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901568,GO:1901569,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1902189,GO:1902190,GO:1902192,GO:1902195,GO:1902196,GO:1902198
Exons4
Evalue2.7e-127
EggNOG OGsCOG1960@1|root,KOG0141@2759|Eukaryota
Ec32 ortholog descriptionisovaleryl-CoA dehydrogenase
Ec32 orthologEc-14_006780.1
EC1.3.8.4
Descriptionisovaleryl-CoA dehydrogenase activity
Cds size708
COG categoryI
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187104.1570168-CDS-P-wetherbeei_contig9656:2..1761683187104.1570168-CDS-P-wetherbeei_contig9656:2..176Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9656 3..176 +
1683187104.1718557-CDS-P-wetherbeei_contig9656:719..8591683187104.1718557-CDS-P-wetherbeei_contig9656:719..859Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9656 720..859 +
1683187104.1801968-CDS-P-wetherbeei_contig9656:1191..14281683187104.1801968-CDS-P-wetherbeei_contig9656:1191..1428Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9656 1192..1428 +
1683187104.1881807-CDS-P-wetherbeei_contig9656:1651..18081683187104.1881807-CDS-P-wetherbeei_contig9656:1651..1808Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9656 1652..1808 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9656.1.1prot_P-wetherbeei_contig9656.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig9656 3..1808 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig9656.1.1

>prot_P-wetherbeei_contig9656.1.1 ID=prot_P-wetherbeei_contig9656.1.1|Name=mRNA_P-wetherbeei_contig9656.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=236bp
MWITNGTADGVSTGDAFLVYAKTGPRPRDVSLFLVEKGMAGFRLGQKIQD
KCGMRASMTAELVFEDVHVPAANLVGEENGAVLCMMRNLEIERVTLAAMS
LGIARRCIETMNGYSRERRAFGSPIASFGQIQRHVAESYAEYMAGRSYTY
NVAAGLDLGSVGNGLDADGAKLFCSVMAKNVADRAIQTLGGYGYCGEYQV
ERLWRDAKLIEIGGGTLEAHHKNMMRDLRKRPHLD*
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mRNA from alignment at P-wetherbeei_contig9656:3..1808+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig9656.1.1 ID=mRNA_P-wetherbeei_contig9656.1.1|Name=mRNA_P-wetherbeei_contig9656.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1806bp|location=Sequence derived from alignment at P-wetherbeei_contig9656:3..1808+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTGGATCACTAACGGGACAGCAGACGGCGTGTCGACGGGCGACGCCTT
CCTGGTGTACGCCAAGACGGGCCCGCGGCCGCGGGACGTGAGCCTCTTCC
TGGTGGAGAAGGGCATGGCAGGCTTTCGGCTGGGCCAGAAGATTCAAGAC
AAGTGTGGCATGCGCGCCAGCATGGTGAGTCACATTTGAAGTCTTATTGC
TGTCTGAGCTCAGAATTTAGTTGAATTTTGAAAGGTTGGCTCGTATTCAG
CCTGTTTAAATCTGCGTCCACCTGTGGACAGGTGATTTTCCTGCGGATTC
CCTGGACCAAAGACGGGCCAGCGTTGCATTCTGCCCGCACGTCTTTGGCT
AGCGCCTCCCCATTTGTTTCTGATGGTTCTCTGGATTAAAGGTATGCCGG
CCTGGTCTTTCACATGCGTGTTGTTGGTCGGCGCCTCGTCTGTTTTCCAT
TTGTTACTTTTTCAAGCAATGTGGGCAGATAAATCCGGTCACCTACTATA
GAATAGGCAGCATGTGCCGCTCCCTTGCTTCCCGTTTTCGTCGCTGCTTT
GCTTCCCGACTGCCGTCCGGGTCTTGGAAGTCTTTTTGGGGCTTACACAG
CGCTCGCATTCTTCTTCTCGCCCGCCTCCCTGTCTCTCTCTCTTTCTCTT
GACGCTCAACCCTGCCACTCCCACTCCACGTCACTCCGCCTTGTACGCGC
CGCGTACCTGCTTGCAGACAGCGGAGCTGGTGTTTGAGGATGTGCACGTG
CCGGCGGCCAACCTGGTGGGGGAAGAGAACGGCGCGGTTCTCTGCATGAT
GCGCAATCTCGAGATCGAGCGCGTCACCCTCGCCGCCATGAGCCTCGGCA
TCGCGAGGTGAGAGGACGGCCATGTCTGAATGAGCTGTGTGACCAGCGTT
TCGACTTGTTTCGGCCGTCACGGCTGTTTTTATTGGAGAAGGAGAGCATT
TCAAATGGCGCTGCGCGTTGCCTCGGGGTTCTTCGCTCAGTCGGTGCTCT
GCTGCCACTGTTCTTACCTTGCCGCTTTCCTCGGGGCTGTTGCCTCGGCT
CTGCTCGCCCACCACAACCCCTGGTTTCTGCTCGTCGGCTGCCTCGCCAC
CGCCATCGCCGCCGCCGCCACCATCGCACCGGCCACATTGATCTTCCTCC
CCAACCATTCGTTTTCCCGTTGCTGCGCGACCGCGCCAGGCGCTGCATCG
AGACGATGAACGGCTACTCGCGCGAGCGGCGCGCCTTCGGCAGCCCAATC
GCATCCTTCGGTCAGATCCAGCGGCATGTGGCTGAGTCGTATGCCGAGTA
CATGGCCGGCCGCAGCTACACATACAACGTGGCAGCCGGGCTCGACCTGG
GCAGCGTCGGCAACGGCCTCGACGCCGACGGCGCCAAGCTGTTCTGCAGC
GTCATGGCTAAGAACGTCGCAGACAGGTGTGGTTGACTGGAGATACATTT
TGATTGCTGTACAACGCGTTTGAACGTGGGCAGGTGTTTCCGATGGGTGG
CTGTTCTCAGGCCTGCACGGCGCAGCACGTTTGTAGCCGACAGTTTGCTT
GTCGCGTGCGTAAGAGTAGTGCAAATGCTCATCCTGCAACCTTTGTCCCT
TCCGTCTCCTCTCGTTTTCCCACCTTTGAGCGTGTGCGTCGTCCGGTAGG
GCGATCCAGACGCTGGGCGGCTATGGCTATTGCGGGGAGTACCAAGTAGA
GCGATTGTGGCGGGACGCCAAGCTCATCGAGATCGGCGGCGGGACGCTCG
AAGCGCACCACAAGAACATGATGCGCGACCTCCGCAAGCGCCCGCATCTC
GACTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig9656:3..1808+

>mRNA_P-wetherbeei_contig9656.1.1 ID=mRNA_P-wetherbeei_contig9656.1.1|Name=mRNA_P-wetherbeei_contig9656.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=708bp|location=Sequence derived from alignment at P-wetherbeei_contig9656:3..1808+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTGGATCACTAACGGGACAGCAGACGGCGTGTCGACGGGCGACGCCTT
CCTGGTGTACGCCAAGACGGGCCCGCGGCCGCGGGACGTGAGCCTCTTCC
TGGTGGAGAAGGGCATGGCAGGCTTTCGGCTGGGCCAGAAGATTCAAGAC
AAGTGTGGCATGCGCGCCAGCATGACAGCGGAGCTGGTGTTTGAGGATGT
GCACGTGCCGGCGGCCAACCTGGTGGGGGAAGAGAACGGCGCGGTTCTCT
GCATGATGCGCAATCTCGAGATCGAGCGCGTCACCCTCGCCGCCATGAGC
CTCGGCATCGCGAGGCGCTGCATCGAGACGATGAACGGCTACTCGCGCGA
GCGGCGCGCCTTCGGCAGCCCAATCGCATCCTTCGGTCAGATCCAGCGGC
ATGTGGCTGAGTCGTATGCCGAGTACATGGCCGGCCGCAGCTACACATAC
AACGTGGCAGCCGGGCTCGACCTGGGCAGCGTCGGCAACGGCCTCGACGC
CGACGGCGCCAAGCTGTTCTGCAGCGTCATGGCTAAGAACGTCGCAGACA
GGGCGATCCAGACGCTGGGCGGCTATGGCTATTGCGGGGAGTACCAAGTA
GAGCGATTGTGGCGGGACGCCAAGCTCATCGAGATCGGCGGCGGGACGCT
CGAAGCGCACCACAAGAACATGATGCGCGACCTCCGCAAGCGCCCGCATC
TCGACTGA
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