mRNA_P-wetherbeei_contig9625.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig9625.1.1
Unique NamemRNA_P-wetherbeei_contig9625.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig9625.1.1 vs. uniprot
Match: A0A0A2KAK4_PENIT (Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB n=1 Tax=Penicillium italicum TaxID=40296 RepID=A0A0A2KAK4_PENIT)

HSP 1 Score: 69.3 bits (168), Expect = 3.140e-9
Identity = 49/148 (33.11%), Postives = 83/148 (56.08%), Query Frame = 3
Query:   75 RGSQTDRLLSLAS-SGDLLALRAMCEGGADV--QTSNADGETPFLLAV--KHADVSAVAELVEGFGAHLGARLKNGQGCLHLAVERGDISILRLLLERFRGVEGLPSVNAKDQQRFTPLHLACTRGDRRIVQLLMRWGADIDAINDRG 503
            + +  D  L +AS  G+    R + +   DV  +  N   +TPFL AV  KH DV    +L+ G GA + A+ +NG+  L++A+E GD+ +++ L+E+ + + G+ +    D +    LH A  +GD +I + L++ GADI+A  D G
Sbjct:  367 QNNDEDTALHIASRDGNTELARVLIKMRKDVPLEIRNGSSQTPFLTAVVNKHYDV---VDLLIGAGAKIDAKDENGRTALNIAIEYGDLRLVKTLVEKQKDLSGIQN----DSKEKALLH-AAEKGDSKIFRFLLKAGADIEACGDCG 506          
BLAST of mRNA_P-wetherbeei_contig9625.1.1 vs. uniprot
Match: W5KC65_ASTMX (Ankyrin-3-like n=1 Tax=Astyanax mexicanus TaxID=7994 RepID=W5KC65_ASTMX)

HSP 1 Score: 65.9 bits (159), Expect = 3.440e-8
Identity = 49/152 (32.24%), Postives = 78/152 (51.32%), Query Frame = 3
Query:   45 LAVRQVFETMRGSQTDRLLSLASSGDLLAL-RAMCEGGADVQTSNADGETPFLLAVKHADVSAVAELVEGFGAHLGARLKNGQGCLHLAVERGDISILRLLLERFRGVEGLPSVNAKDQQRFTPLHLACTRGDRRIVQLLMRWGADIDAIND 497
            L +R +   M  ++   +L  A   +L  +  A+ E G DV   +  G TP LLA +  +V     LV    AHL  +L N    LHLA++ G + I ++LL++  G++  P++     Q  TPLHL+       ++ LL+R GA +DA+ D
Sbjct:  369 LLLRNIKNRMSQNELKTILFKAVKRNLDGVVAALIEIGIDVNVRDELGYTPLLLATELRNVEVFKMLVSK-KAHLDKKLPNQTSALHLAIQSGSMQITQILLDK--GMD--PNITGPKDQ--TPLHLSALYNQPTLMALLLRKGAQVDAVTD 513          
BLAST of mRNA_P-wetherbeei_contig9625.1.1 vs. uniprot
Match: A0A077ZE45_TRITR (Ank 4 and Ank 2 domain containing protein n=1 Tax=Trichuris trichiura TaxID=36087 RepID=A0A077ZE45_TRITR)

HSP 1 Score: 60.8 bits (146), Expect = 2.920e-7
Identity = 42/135 (31.11%), Postives = 70/135 (51.85%), Query Frame = 3
Query:   96 LLSLASSGDLLALRAMCEGGADVQTSNADGETPFLLAVKHADVSAVAELVEGFGAHLGARLKNGQGCLHLAVERG--DISILRLLLERFRGVEGLPSVNAKDQQRFTPLHLACTRGDRRIVQLLMRWGADIDAIN 494
            ++  A++G+L AL+A+  GGA++   N+ G++   +A     V+AV  L++    +L    K     LH+AV  G  D ++  L+LE+         VNA+D    +PLH+AC  G   IV LL  +  ++   N
Sbjct:   75 MIVAAATGNLGALKALVNGGAELHHLNSRGDSALHVAASAGQVNAVKYLIKKVNLNLLNNCKESP--LHVAVRSGCVDTTLCLLMLEKI-------DVNAQDMHGNSPLHIACLHGFTMIVSLLCNFKPNLSLRN 200          
BLAST of mRNA_P-wetherbeei_contig9625.1.1 vs. uniprot
Match: UPI000C6F45BD (ankyrin repeat domain-containing protein 61 n=2 Tax=Seriola TaxID=8160 RepID=UPI000C6F45BD)

HSP 1 Score: 61.6 bits (148), Expect = 5.720e-7
Identity = 41/132 (31.06%), Postives = 69/132 (52.27%), Query Frame = 3
Query:  123 LLALRAMCEGGADVQTSNADGETPFLLAVKHADVSAVAELVEGFGAHLGARLKN-GQGCLHLAVERGDISILRLLLERFRGVEGL----PSVNAKDQQRFTPLHLACTRGDRRIVQLLMRWGADIDAINDRG 503
            L A++ +   GADV   +++G TP  +A        +A L+   GA +   LKN G   LHLA     +   + L +    +  L       NA+++   TPLH AC+ G++ +V+LL+R+GA+I+ ++  G
Sbjct:  142 LSAVQILASYGADVNAVDSNGMTPLHMAAGMLHKDIIANLIRQ-GADINMGLKNTGNTPLHLAAVAMAMKTTKTLQDDLNCISELLDHGAEPNAENKAGITPLHEACSMGNKELVELLLRYGANINKLSQAG 272          
BLAST of mRNA_P-wetherbeei_contig9625.1.1 vs. uniprot
Match: A0A2C9LGB6_BIOGL (Uncharacterized protein n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9LGB6_BIOGL)

HSP 1 Score: 62.0 bits (149), Expect = 6.540e-7
Identity = 39/116 (33.62%), Postives = 64/116 (55.17%), Query Frame = 3
Query:  153 GADVQTSNADGETPFLLAVKHADVSAVAELVEGFGAHLGARLKNGQGCLHLAVERGDISILRLLLERFRGVEGLPSVNAKDQQRFTPLHLACTRGDRRIVQLLMRWGADIDAINDR 500
            G  V   N   +TP  LAVK   + AV  L++  GA + +    G   +H+AV+   +  L++LLER    E    +N+++    TPLH A   GD ++V+LL+++GA+ID  + +
Sbjct:   15 GRGVDKFNKQQQTPLHLAVKLDFLDAVDILLKS-GAKVNSVDCTGSSAIHMAVQGRSMQCLQMLLERCPDAE----LNSRNFDGLTPLHTAVDNGDLKLVELLLKYGAEIDVTDGK 125          
BLAST of mRNA_P-wetherbeei_contig9625.1.1 vs. uniprot
Match: K1R9U0_CRAGI (SOCS box domain-containing protein n=2 Tax=Crassostrea gigas TaxID=29159 RepID=K1R9U0_CRAGI)

HSP 1 Score: 61.2 bits (147), Expect = 7.290e-7
Identity = 38/105 (36.19%), Postives = 56/105 (53.33%), Query Frame = 3
Query:  189 TPFLLAVKHADVSAVAELVEGFGAHLGARLKNGQGCLHLAVERGDISILRLLLERFRGVEGLPSVNAKDQQRFTPLHLACTRGDRRIVQLLMRWGADIDAINDRG 503
            TP   AV H D++ +  LV+G G  + +    G   L  AV+  +  +++LLL    G     +VNA D  +  PLH+A   G+ RI  LL+R GA++DA   RG
Sbjct:  143 TPMFAAVVHGDIATIKILVKG-GYDVSSHDDRGCTALWHAVDLDNYDMVKLLLG---GGNAKTAVNAPDNAKLRPLHIAAMHGNSRISSLLIRGGAEVDATQIRG 243          
BLAST of mRNA_P-wetherbeei_contig9625.1.1 vs. uniprot
Match: UPI00187BD051 (ankyrin repeat domain-containing protein 61-like isoform X1 n=2 Tax=Acanthopagrus latus TaxID=8177 RepID=UPI00187BD051)

HSP 1 Score: 61.2 bits (147), Expect = 7.950e-7
Identity = 44/134 (32.84%), Postives = 71/134 (52.99%), Query Frame = 3
Query:  123 LLALRAMCEGGADVQTSNADGETPFLLA--VKHADVSAVAELV-EGFGAHLGARLKNGQGCLHLAVERGDISILRLLLERFRGVEGL----PSVNAKDQQRFTPLHLACTRGDRRIVQLLMRWGADIDAINDRG 503
            L A+  +   GADV  ++++G TP  +A  + H D+  +A LV EG   ++G +  +G   LH+A     +   + L +    +  L      VNA ++   TPL  ACT GD  +V LL+R+GA+ID ++  G
Sbjct:  160 LSAIHILASYGADVNAADSNGMTPLHMAAGILHKDI--IASLVREGADINMGVK-DSGNTPLHIAAVATAMKTTKTLEDSSGCISELVKHGAQVNATNKAGLTPLQEACTIGDNELVDLLLRYGANIDELSKAG 290          
BLAST of mRNA_P-wetherbeei_contig9625.1.1 vs. uniprot
Match: A0A8C9SAS6_SCLFO (BCL3 transcription coactivator n=1 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9SAS6_SCLFO)

HSP 1 Score: 61.2 bits (147), Expect = 1.050e-6
Identity = 42/118 (35.59%), Postives = 62/118 (52.54%), Query Frame = 3
Query:  141 MCEGGADVQTSNADGETPFLLAVKHADVSAVAELVEGFGAHLGARLKNGQGCLHLAVERGDISILRLLLERFRGVEGLPSVNAKDQQRFTPLHLACTRGDRRIVQLLMRWGADIDAIN 494
            + + G D+   N   +TP  LAV     + V  L+   GA  G   +NGQ   HL  E G  S L L+L+     E    +  ++ +  TPLHLA  +GD+ +V+LL+  GADIDA++
Sbjct:  248 LTQTGRDLDIYNNLMQTPLHLAVITHQANLVQALLNA-GADPGTLDRNGQTAAHLCCEHGLRSCLALILKYS---ECQSCLKVRNYEGLTPLHLAVQKGDKELVRLLLDSGADIDAVD 361          
BLAST of mRNA_P-wetherbeei_contig9625.1.1 vs. uniprot
Match: UPI0003F0C7BC (serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F0C7BC)

HSP 1 Score: 60.1 bits (144), Expect = 1.980e-6
Identity = 38/120 (31.67%), Postives = 69/120 (57.50%), Query Frame = 3
Query:  153 GADVQTSNADGETPFLLAVKHADVSAVAELVEGFGAHLGARLKNGQGCLHLAVERG--DISILRLLLERFRGVEGLPSVNAKDQQRFTPLHLACTRG-DRRIVQLLMRWGADIDAINDRG 503
            G+D++ ++A G+TP  +A ++   S + +L+   G  +  +  + +  LHL ++    +I+   + +E F  V     VNA+D +  T LHLA   G D +I+  L+R GAD+DA+N++G
Sbjct:  195 GSDLELNDAQGKTPLHIAAENCSFSVLRDLIR-CGCDMVTKTNDDETVLHLIIKGATTEINCALVFIEYF--VRSGVDVNARDVRGNTALHLAARIGTDDKIIAQLVRNGADVDAVNNKG 311          
BLAST of mRNA_P-wetherbeei_contig9625.1.1 vs. uniprot
Match: UPI0006C93CEF (serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B-like n=1 Tax=Trichogramma pretiosum TaxID=7493 RepID=UPI0006C93CEF)

HSP 1 Score: 60.1 bits (144), Expect = 2.490e-6
Identity = 38/116 (32.76%), Postives = 57/116 (49.14%), Query Frame = 3
Query:  162 VQTSNADGETPFLLAVKHADVSAVAELVEGFGAHLGARLKNGQGCLHLAVERGDIS--ILRLLLERFRGVEGLPSVNAKDQQRFTPLHLACTRGDRRIVQLLMRWGADIDAINDRG 503
            +   N +G TP LLAV   +  ++ E +   GA        G   LH A+ +GD    ++    E  R       +NA+D Q  TPLHLA ++G++ +V+ L+R GAD    N  G
Sbjct:  276 IDAQNNEGNTPLLLAVSKGNFRSLGEFLLRKGADPNLANAEGSTALH-AICKGDYDQDLVNAFFELSRENNHPVLINAQDNQGNTPLHLAVSKGNKNVVEYLLRRGADSSLANAEG 390          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9625.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0A2KAK4_PENIT3.140e-933.11Mg2+ transporter protein, CorA-like/Zinc transport... [more]
W5KC65_ASTMX3.440e-832.24Ankyrin-3-like n=1 Tax=Astyanax mexicanus TaxID=79... [more]
A0A077ZE45_TRITR2.920e-731.11Ank 4 and Ank 2 domain containing protein n=1 Tax=... [more]
UPI000C6F45BD5.720e-731.06ankyrin repeat domain-containing protein 61 n=2 Ta... [more]
A0A2C9LGB6_BIOGL6.540e-733.62Uncharacterized protein n=1 Tax=Biomphalaria glabr... [more]
K1R9U0_CRAGI7.290e-736.19SOCS box domain-containing protein n=2 Tax=Crassos... [more]
UPI00187BD0517.950e-732.84ankyrin repeat domain-containing protein 61-like i... [more]
A0A8C9SAS6_SCLFO1.050e-635.59BCL3 transcription coactivator n=1 Tax=Scleropages... [more]
UPI0003F0C7BC1.980e-631.67serine/threonine-protein phosphatase 6 regulatory ... [more]
UPI0006C93CEF2.490e-632.76serine/threonine-protein phosphatase 6 regulatory ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9625contigP-wetherbeei_contig9625:67..1043 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FGT9
PFAMsAnk_2,Ank_3,Ank_4,Ank_5,SIR2
Model size977
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.74e-19
EggNOG OGsCOG0666@1|root,KOG4177@2759|Eukaryota
Descriptionspectrin binding
Cds size906
COG categoryI
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187102.529502-CDS-P-wetherbeei_contig9625:66..9721683187102.529502-CDS-P-wetherbeei_contig9625:66..972Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9625 67..972 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187102.5401306-UTR-P-wetherbeei_contig9625:972..10431683187102.5401306-UTR-P-wetherbeei_contig9625:972..1043Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig9625 973..1043 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9625.1.1prot_P-wetherbeei_contig9625.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig9625 67..972 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig9625.1.1

>prot_P-wetherbeei_contig9625.1.1 ID=prot_P-wetherbeei_contig9625.1.1|Name=mRNA_P-wetherbeei_contig9625.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=302bp
MRGSQTDRLLSLASSGDLLALRAMCEGGADVQTSNADGETPFLLAVKHAD
VSAVAELVEGFGAHLGARLKNGQGCLHLAVERGDISILRLLLERFRGVEG
LPSVNAKDQQRFTPLHLACTRGDRRIVQLLMRWGADIDAINDRGSTPLHW
ACSRGHTELVKLLVGVYAADFERPAGNAATPLHWAAAKGQVSVVSLLVGT
YCAEVDARDDRGCTPLLMASLNGHMGTVRLLVDRFGASVTAHDKKGTTAL
HAAAEMGHAALATLLVERYGMDVDCTDRRRMTPLGRAALRNRADVVETLT
GR
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mRNA from alignment at P-wetherbeei_contig9625:67..1043-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig9625.1.1 ID=mRNA_P-wetherbeei_contig9625.1.1|Name=mRNA_P-wetherbeei_contig9625.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=977bp|location=Sequence derived from alignment at P-wetherbeei_contig9625:67..1043- (Phaeothamnion wetherbeei SAG_119_79)
GAATTCCTCTTTTTAAGAACGGCTGGTAGGGTGTGATTCGACGCCTGGCG GTGAGACAGGTGTTCGAGACGATGCGGGGGTCCCAGACCGACCGGCTCTT GTCTTTGGCTTCCAGCGGGGACCTTCTCGCTCTGAGAGCGATGTGTGAAG GTGGCGCAGACGTGCAAACGAGCAACGCCGACGGCGAGACGCCGTTTCTT TTAGCGGTAAAACATGCCGACGTGTCGGCCGTGGCGGAGCTTGTAGAAGG TTTCGGAGCGCATCTAGGAGCCCGCTTGAAAAATGGACAGGGTTGCCTCC ATTTGGCCGTGGAGCGGGGCGATATCTCCATTCTGCGCCTGCTTTTAGAA AGATTTCGCGGCGTGGAAGGCCTCCCCAGCGTGAATGCAAAGGACCAGCA GCGATTCACGCCCCTCCACCTCGCGTGCACAAGAGGAGACCGGCGCATCG TCCAGCTCCTCATGCGGTGGGGCGCCGACATCGATGCCATCAACGACCGC GGCTCCACCCCTCTCCACTGGGCGTGCTCCCGCGGGCACACGGAGCTGGT CAAGCTGCTGGTGGGAGTCTACGCCGCCGACTTTGAGCGTCCGGCCGGCA ACGCCGCCACGCCGCTGCACTGGGCGGCCGCCAAGGGCCAAGTGAGCGTC GTGTCGCTCCTCGTGGGCACCTACTGCGCCGAGGTGGATGCCCGCGACGA CCGTGGCTGCACGCCGCTGCTGATGGCGTCGCTCAACGGCCATATGGGCA CGGTGCGCCTGCTGGTCGACCGCTTCGGCGCCAGCGTCACCGCCCACGAC AAGAAGGGCACGACGGCGCTACACGCCGCGGCGGAGATGGGCCACGCCGC TCTCGCTACGCTGCTGGTGGAGCGCTACGGCATGGACGTTGACTGCACCG ACCGTCGCCGCATGACCCCGCTCGGCCGCGCCGCGCTCCGCAACCGCGCT GACGTCGTGGAGACGCTCACCGGGCGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig9625:67..1043-

>mRNA_P-wetherbeei_contig9625.1.1 ID=mRNA_P-wetherbeei_contig9625.1.1|Name=mRNA_P-wetherbeei_contig9625.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=906bp|location=Sequence derived from alignment at P-wetherbeei_contig9625:67..1043- (Phaeothamnion wetherbeei SAG_119_79)
ATGCGGGGGTCCCAGACCGACCGGCTCTTGTCTTTGGCTTCCAGCGGGGA
CCTTCTCGCTCTGAGAGCGATGTGTGAAGGTGGCGCAGACGTGCAAACGA
GCAACGCCGACGGCGAGACGCCGTTTCTTTTAGCGGTAAAACATGCCGAC
GTGTCGGCCGTGGCGGAGCTTGTAGAAGGTTTCGGAGCGCATCTAGGAGC
CCGCTTGAAAAATGGACAGGGTTGCCTCCATTTGGCCGTGGAGCGGGGCG
ATATCTCCATTCTGCGCCTGCTTTTAGAAAGATTTCGCGGCGTGGAAGGC
CTCCCCAGCGTGAATGCAAAGGACCAGCAGCGATTCACGCCCCTCCACCT
CGCGTGCACAAGAGGAGACCGGCGCATCGTCCAGCTCCTCATGCGGTGGG
GCGCCGACATCGATGCCATCAACGACCGCGGCTCCACCCCTCTCCACTGG
GCGTGCTCCCGCGGGCACACGGAGCTGGTCAAGCTGCTGGTGGGAGTCTA
CGCCGCCGACTTTGAGCGTCCGGCCGGCAACGCCGCCACGCCGCTGCACT
GGGCGGCCGCCAAGGGCCAAGTGAGCGTCGTGTCGCTCCTCGTGGGCACC
TACTGCGCCGAGGTGGATGCCCGCGACGACCGTGGCTGCACGCCGCTGCT
GATGGCGTCGCTCAACGGCCATATGGGCACGGTGCGCCTGCTGGTCGACC
GCTTCGGCGCCAGCGTCACCGCCCACGACAAGAAGGGCACGACGGCGCTA
CACGCCGCGGCGGAGATGGGCCACGCCGCTCTCGCTACGCTGCTGGTGGA
GCGCTACGGCATGGACGTTGACTGCACCGACCGTCGCCGCATGACCCCGC
TCGGCCGCGCCGCGCTCCGCAACCGCGCTGACGTCGTGGAGACGCTCACC
GGGCGA
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