mRNA_P-wetherbeei_contig962.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig962.4.1 vs. uniprot
Match: A0A836CL88_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL88_9STRA) HSP 1 Score: 313 bits (801), Expect = 2.360e-97 Identity = 165/296 (55.74%), Postives = 195/296 (65.88%), Query Frame = 1 Query: 1 GYGWCALEWGW------------DPGLAALYYGLGAEDDPGLRQPNSRFAITYVNGIYHTREDWERLTTQLQGMFEHRVRPFYNPTSGWWLADASRAGYHLMRRPADDEVVRGLAGHLQQALADVGPRGRVLHLAHSGGALLTYLAAKHHLASDETARIDVLAFGGARSITRKYFGGRTVNYYARNDPLVFVDRRAAGLMKHAVNQTYQEVMYAKHNTTFVFLAGRANNALVDHSLEGPTYMAALEREAAFYRRRYFGSPGPLTTWGYDMSPLRRLRKLLARQSGLHHLLDGSAGL 852 GYGW LEW W + + L G P SR IT+VNGI+H+ EDW+R+T QL +F+ VR FYNP++GWW+AD + AG+ L+RR V R LA HL++AL GPRGRVLHLAHSGGAL+TYLAAK+HL + E ARIDV+ FGGARSITRKYF GRTVNYYARNDPLV +DRRAA LMK A N+TYQEV+YAKHNTTFVF+ G + +DHSLEGPTY ALE EA R SP PL Y S +R RK A +GLH D + GL Sbjct: 23 GYGWSTLEWQWPTVNTTTIASYINANITTLLPGTTPVPPP----VPSRQIITFVNGIFHSEEDWQRITEQLDDIFKQEVRAFYNPSTGWWVADLAGAGFDLVRRSDTHSVARALALHLREALELSGPRGRVLHLAHSGGALMTYLAAKYHLRAAERARIDVVTFGGARSITRKYFSGRTVNYYARNDPLVILDRRAASLMKGAANETYQEVVYAKHNTTFVFMEGMTRSPFMDHSLEGPTYKIALEIEARNLLDRARESPSPLPGQAYATSWVRAARKRAAAATGLHSFWDETLGL 314
BLAST of mRNA_P-wetherbeei_contig962.4.1 vs. uniprot
Match: D8LFC9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFC9_ECTSI) HSP 1 Score: 298 bits (764), Expect = 5.490e-90 Identity = 151/258 (58.53%), Postives = 185/258 (71.71%), Query Frame = 1 Query: 85 GLRQP-NSRFAITYVNGIYHTREDWERLTTQLQGMFEHRVRPFYNPTSGWWLADASRAGYHLMRRPADDEVVRGLAGHLQQALADVGPRGRVLHLAHSGGALLTYLAAKHHLASDETARIDVLAFGGARSITRKYFGGRTVNYYARNDPLVFVDRRAAGLMKHAVNQTYQE----------VMYAKHNTTFVFLAGRANNALVDHSLEGPTYMAALEREAAFYRRRYFGSPGPLTTWGYDMSPLRRLRKLLARQSGLH 825 G R P N ITY+NGI+H+ +WE +T QLQ +F H VR FYNP+SGWW+ DAS+AGYH++R+PA+ + + L HL QA+ DVG RGRVLH+AHSGGAL+TYLAA+HHL + +IDV+ FGGARSITRKYF GR VNYYARNDPLV +DRRAA LMK N +QE + KHNTTFVFL GRA ++DHSLEGPTY AL +EA +RR +FG PL+ W YD S LR +RK +A+ SGLH Sbjct: 39 GRRWPANDGVVITYINGIFHSVPEWESITQQLQALFGHEVRSFYNPSSGWWITDASKAGYHMLRKPANHTIAQALGDHLAQAVEDVG-RGRVLHIAHSGGALITYLAAQHHLTRRQRDKIDVVTFGGARSITRKYFSGRVVNYYARNDPLVKLDRRAAELMKLTNNTKFQEGARRTKNGIWKINEKHNTTFVFLEGRARQFVLDHSLEGPTYQHALMKEAKAFRRAHFGPLSPLS-WDYDQSILRLVRKKVAQLSGLH 294
BLAST of mRNA_P-wetherbeei_contig962.4.1 vs. uniprot
Match: A0A482SJI3_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SJI3_9ARCH) HSP 1 Score: 270 bits (689), Expect = 3.050e-85 Identity = 142/280 (50.71%), Postives = 182/280 (65.00%), Query Frame = 1 Query: 91 RQPNSRFAITYVNGIYHTREDWERLTTQLQGMFEHRVRPFYNPTSGWWLADASRAGYHLMRRPADDEVVRGLAGHLQQALADVGPRGRVLHLAHSGGALLTYLAAKHHLASDETARIDVLAFGGARSITRKYFGGRTVNYYARNDPLVFVDRRAAGLMKHAVNQTYQEVMYAKHNTTFVFLAGRANNALVDHSLEGPTYMAALEREAAFYRRRYFGSPGPLTTWGYDMSPLRRLRKLLARQSGLHHLLD-----GSAGL-RAARKRAAAATGLHGFFSGK 912 + P IT+VNGIYH+ +DW ++ + +F VRPFYNP+SG W+ DA+RAG L+ RP+D ++ +GLA HL+ AL DV P+GRVLHLAHSGGA+LTYLAAKHHL + ET+RID++ FG +SITRKYF GR NYYARNDPL VD+R L+K N TY E+ KHNTTFVFLA +AN+ +VDHS+ GPTY A+ EA ++ R L + +R LRK A +G HH D SA + R RK +A T G+FS K Sbjct: 77 KSPPPATIITFVNGIYHSIDDWRNISADISELFNAEVRPFYNPSSGVWVKDATRAGIDLVMRPSDQDLAKGLANHLRLALNDVEPKGRVLHLAHSGGAILTYLAAKHHLTTQETSRIDIVTFGAGKSITRKYFKGRVYNYYARNDPLTIVDKRTNQLIKRVRNHTYHEIRDHKHNTTFVFLAPQANHPIVDHSMLGPTYRYAMALEAEQFKDRLKMF---LMLKAKEKDVIRLLRKQAANATGFHHFWDWQVYGASANMFRRVRKFSANVTKKRGYFSKK 353
BLAST of mRNA_P-wetherbeei_contig962.4.1 vs. uniprot
Match: K8YTC9_NANGC (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YTC9_NANGC) HSP 1 Score: 260 bits (665), Expect = 8.020e-82 Identity = 134/252 (53.17%), Postives = 170/252 (67.46%), Query Frame = 1 Query: 100 NSRFAITYVNGIYHTREDWERLTTQLQGMFEHRVRPFYNPTSGWWLADASRAGYHLMRRPADDEVVRGLAGHLQQALADVGPRGRVLHLAHSGGALLTYLAAKHHLASDETARIDVLAFGGARSITRKYFGGRTVNYYARNDPLVFVDRRAAGLMKHAVNQTYQ-EVMYAKHNTTFVFLAGRANNALVDHSLEGPTYMAALEREAAFYRRRYFGS---PGPLTTWGYDMSPLRRLRKLLARQSGLHHLLDGS 843 N A+T+VNGI +T E+ E L +F RVRP+YNP+ GWWL D +R Y +R P +D VV GLA HL + L +VGP+GRV+HLAHSGGALLTYL AK+HL + RIDVL FGGARSIT+KYFG T NYYARNDP++ V+RRA LM+ +N++ EV+Y KHNT+FVFL GRA +AL DHS GPTY+ AL +EAA +RR Y+ G + DM R +RK +A +G H+ S Sbjct: 66 NPSIALTWVNGINYTNEEMEEQARFLSSLFGCRVRPYYNPSLGWWLRDLTRVSYMYIRSPTEDPVVTGLARHLSRVLLEVGPKGRVIHLAHSGGALLTYLVAKYHLKETDRRRIDVLNFGGARSITQKYFGKAT-NYYARNDPILLVNRRAMNLMQQLLNESADGEVIYLKHNTSFVFLQGRAGDALTDHSFIGPTYLMALNKEAAVFRRSYYRPYWLDGLIIAKPPDMGWARFVRKRVAAATGFHNYFSNS 316
BLAST of mRNA_P-wetherbeei_contig962.4.1 vs. uniprot
Match: A0A6H5K5Y0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5Y0_9PHAE) HSP 1 Score: 273 bits (697), Expect = 2.280e-80 Identity = 150/298 (50.34%), Postives = 184/298 (61.74%), Query Frame = 1 Query: 85 GLRQP-NSRFAITYVNGIYHTREDWERLTTQLQGMFEHRVRPFYNPTSGWWLADASRAGYHLMRRPADDEVVRGLAGHLQQALADVGPRGRVLHLAHSGGALLTYLAAKHHLASDETARIDVLAFGGARSITRKYFGGRT------------------------------------VNYYARNDPLVFVDRRAAGLMKHAVNQTYQEVMYAKHNTTFVFLAGRANNALVDHSLEGPTYMAALEREAAFYRRR--------------YFGSPGPLTTWGYDMSPLRRLRKLLARQSGLH 825 G R P N ITY+NGI+H+ +WE +T QLQ +F H VR FYNP+SGWW+ DAS+AGYH++R+PA+ + + L HL QA+ DVG RGRVLH+AHSGGAL+TYLAA+HHL + +IDV+ FGGARSITRKYF GR VNYYARNDPLV +DRRAA LMK N +QE+ KHNTTFVFL GRA ++DHSLEGPTY AL +EA +R +FG PL+ W YD S LR +RK +A+ SGLH Sbjct: 34 GRRWPANDGVVITYINGIFHSVPEWESITQQLQALFGHEVRSFYNPSSGWWITDASKAGYHMLRKPANHTIAQALGDHLAQAVEDVG-RGRVLHIAHSGGALITYLAAQHHLTRRQRDKIDVVTFGGARSITRKYFSGRVGEAASLLFLTLILGCSLTPVLLFLLLTHRRLLVLFPVNYYARNDPLVKLDRRAAELMKLTNNTKFQEIN-EKHNTTFVFLEGRARQFVLDHSLEGPTYQHALMKEAKGKKREDLGVQRTVCWGEWAHFGPLSPLS-WDYDQSILRLVRKKVAQLSGLH 328
BLAST of mRNA_P-wetherbeei_contig962.4.1 vs. uniprot
Match: W7U1H3_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1H3_9STRA) HSP 1 Score: 260 bits (665), Expect = 1.580e-76 Identity = 134/252 (53.17%), Postives = 170/252 (67.46%), Query Frame = 1 Query: 100 NSRFAITYVNGIYHTREDWERLTTQLQGMFEHRVRPFYNPTSGWWLADASRAGYHLMRRPADDEVVRGLAGHLQQALADVGPRGRVLHLAHSGGALLTYLAAKHHLASDETARIDVLAFGGARSITRKYFGGRTVNYYARNDPLVFVDRRAAGLMKHAVNQTYQ-EVMYAKHNTTFVFLAGRANNALVDHSLEGPTYMAALEREAAFYRRRYFGS---PGPLTTWGYDMSPLRRLRKLLARQSGLHHLLDGS 843 N A+T+VNGI +T E+ E L +F RVRP+YNP+ GWWL D +R Y +R P +D VV GLA HL + L +VGP+GRV+HLAHSGGALLTYL AK+HL + RIDVL FGGARSIT+KYFG T NYYARNDP++ V+RRA LM+ +N++ EV+Y KHNT+FVFL GRA +AL DHS GPTY+ AL +EAA +RR Y+ G + DM R +RK +A +G H+ S Sbjct: 66 NPSIALTWVNGINYTNEEMEEQARFLSSLFGCRVRPYYNPSLGWWLRDLTRVSYMYIRSPTEDPVVTGLARHLSRVLLEVGPKGRVIHLAHSGGALLTYLVAKYHLKETDRRRIDVLNFGGARSITQKYFGKAT-NYYARNDPILLVNRRAMNLMQQLLNESADGEVIYLKHNTSFVFLQGRAGDALTDHSFIGPTYLMALNKEAAVFRRSYYRPYWLDGLIIAKPPDMGWARFVRKRVAAATGFHNYFSNS 316
BLAST of mRNA_P-wetherbeei_contig962.4.1 vs. uniprot
Match: A0A7S4PRT6_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PRT6_GUITH) HSP 1 Score: 120 bits (300), Expect = 2.610e-27 Identity = 95/278 (34.17%), Postives = 134/278 (48.20%), Query Frame = 1 Query: 106 RFAITYVNGIYHTREDWERLTTQLQGMFEHRVRPFYNPTSGWWLADASRAGYHLMRRPADDEVVRGLAGHLQQALADVGPRGRVLHLAHSGGALLTYLAAKHHLASDETARIDVLAFGGARSITRKYFGGRTVNYYARNDPLVFVDRRAAGLMK-----------HAV----NQTYQE-----------------VMYAKHNTTFVFLAGRANN--ALVDHSLEGPTYMAALEREAAFYRRRYFGSPGPLTTWGYDMSPLRRLRKLLARQSGLHHLLD 837 R +TY+NGI + D + + G+F PF+N T+G LAD S+A + EV + LA HL+ L +VG G V+H+AHS GAL+T+L K L+ + ARI V+ FGGA S+T +G TVNYY+ N+P++++D RA+ +K H + N + E V + T+F+FL A LVDHS G TYM AL EA +R ++F L + S R R G HH D Sbjct: 1 RVRLTYINGIRTDKRDCLTAASVISGLFGCDCYPFWNKTAGA-LADLSQAARQKIFNVETSEV-KDLAEHLKLHLREVGKDGIVVHIAHSQGALITFLC-KKFLSVAQRARILVIVFGGASSLTNDDYGD-TVNYYSTNEPMLYIDARASKALKKLEAEGVASAQHGILLRRNASDDEGRKWFSFIGKSPAFPPGVQVEQDGTSFIFLHPVAGGRFGLVDHSFLGATYMKALRFEAEKFRTQHFSWWSRLVR-SIETSEFMRSRSSQMSAPGDHHEAD 273
BLAST of mRNA_P-wetherbeei_contig962.4.1 vs. uniprot
Match: A0A7S2XT02_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XT02_9STRA) HSP 1 Score: 116 bits (290), Expect = 1.350e-26 Identity = 80/222 (36.04%), Postives = 121/222 (54.50%), Query Frame = 1 Query: 97 PNSRFAITYVNGIYHTREDWERLTTQLQGMFEHRVRPF-YNPTSGW-------WLADASRAGYHLMRRPADDEVVRGLAGHLQQALADVGPRGRVLHLAHSGGALLTYLAAKHHLASDETARIDVLAFGGARSITRKYFGG--RTVNYYARNDPLVFVDRRAAGLMKHAVNQTYQEVMYAKHNTTFVFLAGRANNALVDHSLEGPTYMAALEREAAFYRRRY 732 P SR +T+VNGI H + + +F + F +NPT+ ++ D ++AG H R + V L HL+QAL VG RGRV+H+AHS GAL+T LA + + E +R++VL FGG I + F R VNYY+ NDPL+ ++ RA + T+Q ++ FVFL R ++ +++HSL GPTYM AL E +++++ Sbjct: 49 PRSR--LTWVNGIGHNLQHMGEGVVDISSLFGGKKVEFCHNPTAMTSDDDYVGYIGDLTQAGIHKWGRITGE--VDALVIHLKQALKAVGSRGRVVHIAHSQGALITNLALRR-FSESELSRMEVLCFGGGAVIGKADFPALRRVVNYYSVNDPLLNINPRAVQALNSGF--TFQ------NDPEFVFLTPRVSDPIIEHSLTGPTYMQALAWEGQRFQQQF 257
BLAST of mRNA_P-wetherbeei_contig962.4.1 vs. uniprot
Match: A0A7S3GYT0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GYT0_9STRA) HSP 1 Score: 111 bits (278), Expect = 3.490e-26 Identity = 54/107 (50.47%), Postives = 74/107 (69.16%), Query Frame = 1 Query: 88 LRQPNSRFAITYVNGIYHTREDWERLTTQLQGMFEHRVRPFYNPTSGWWLADASRAGYHLMRRPADDEVVRGLAGHLQQALADVGPR-GRVLHLAHSGGALLTYLAA 405 L+ P +T+VNGIYH+ ++ L L+ MF VR FYNP+SG W+ DA +AG+ L+ RP D + + LA HL+ AL +V P+ GRVLH+AHSGGA++TYLAA Sbjct: 85 LKVPEKLMVLTFVNGIYHSEKEVRELAIYLRCMFRSDVRTFYNPSSGSWVKDAYKAGFELVLRPNDLILAKQLAEHLRSALREVHPKKGRVLHIAHSGGAIITYLAA 191
BLAST of mRNA_P-wetherbeei_contig962.4.1 vs. uniprot
Match: A0A7S2KM92_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KM92_9STRA) HSP 1 Score: 104 bits (260), Expect = 1.910e-22 Identity = 76/225 (33.78%), Postives = 117/225 (52.00%), Query Frame = 1 Query: 106 RFAITYVNGIYHTREDWERLTTQLQGMFEH-RVRPFYNPTSGW-------WLADASRAGYHLMRRPADDEVVRGLAGHLQQALADVGPRGRVLHLAHSGGALLTYLAAKHHLASDETARIDVLAFGGARSI-TRKYFGGRTVNYYARNDPLVFVDRRAAGLMKHAVNQTYQEVMYAKHNTTFVFLAGRANNALVDHSLEGPTYMAALEREAAFYRRRYFGSPGPL 753 R +T+VNGI H E T + +F +V +NP+S ++ D +A H+M EV L HL+ AL VG GRV+H+AHS G+++T+LAAK L +E RI++++FGGA +I T ++ R +NYY+ NDP++ V A +K + + + M + +FLA R + DH L PTY+ AL E Y+ + G + Sbjct: 32 RTKLTWVNGIAHMPEHMSDPTFVISTIFGGVKVDYCHNPSSMTSESDYLGFVKDGIQASTHVMMSRFTPEV-DSLVEHLRDALKQVGRNGRVIHIAHSQGSVITWLAAKR-LKPEECKRIEIISFGGAATICTSEFPFARCINYYSVNDPILNVVPSAVKALKSGFS--FGDGMQQE----IIFLASRTGDPATDHGLLNPTYLEALVWEGQRYQSLFVSPLGQM 248 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig962.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig962.4.1 >prot_P-wetherbeei_contig962.4.1 ID=prot_P-wetherbeei_contig962.4.1|Name=mRNA_P-wetherbeei_contig962.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=304bp GYGWCALEWGWDPGLAALYYGLGAEDDPGLRQPNSRFAITYVNGIYHTREback to top mRNA from alignment at P-wetherbeei_contig962:5203..8020+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig962.4.1 ID=mRNA_P-wetherbeei_contig962.4.1|Name=mRNA_P-wetherbeei_contig962.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2818bp|location=Sequence derived from alignment at P-wetherbeei_contig962:5203..8020+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig962:5203..8020+ >mRNA_P-wetherbeei_contig962.4.1 ID=mRNA_P-wetherbeei_contig962.4.1|Name=mRNA_P-wetherbeei_contig962.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=912bp|location=Sequence derived from alignment at P-wetherbeei_contig962:5203..8020+ (Phaeothamnion wetherbeei SAG_119_79)back to top |