mRNA_P-wetherbeei_contig9617.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig9617.1.1 vs. uniprot
Match: A0A835ZAN1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAN1_9STRA) HSP 1 Score: 128 bits (322), Expect = 1.760e-33 Identity = 64/111 (57.66%), Postives = 80/111 (72.07%), Query Frame = 1 Query: 1 GDKYKEMSLKSWDENVALAEALAADRHFSGRHIFLSTEDPEVVEEAIREEAWSVMVLPWRRGNENHEELMEMG--DSLFIFSLVNLFLAAEAQHFVGTRSSNWNRLIDELR 327 GDK EM+L+SW E+ A+ LA R F GR FLSTEDPEVV+EA + W ++VLP+RR N + ++ E+G D L +FSL NLF+A EA HF+GTR SNWNRLIDELR Sbjct: 234 GDKGAEMALRSWQEHKTRADELAKARRFRGRTAFLSTEDPEVVKEAHADGTWDILVLPYRRDNGDFAQMAELGVSDDLVLFSLENLFIALEATHFLGTRGSNWNRLIDELR 344
BLAST of mRNA_P-wetherbeei_contig9617.1.1 vs. uniprot
Match: A0A836CN48_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN48_9STRA) HSP 1 Score: 100 bits (248), Expect = 5.160e-23 Identity = 60/116 (51.72%), Postives = 69/116 (59.48%), Query Frame = 1 Query: 1 GDKYKEMSLKSWDENVALAEALAADRHFSGRHIFLSTEDPEVVEEAIREEAWSVMVLP-------WRRGNENHEELMEMGDSLFIFSLVNLFLAAEAQHFVGTRSSNWNRLIDELR 327 GDK EM L+SW E+ A+ LA RHF GR +FLSTEDPEVV EA + + LP + H L D L +FSL NL LA EA HFVG+R SNWNRLIDELR Sbjct: 195 GDKAFEMVLRSWQEHRTRADELAMARHFEGRTLFLSTEDPEVVTEARADGTSASKCLPNPGIPAPLCTDSPRHRVLAF--DDLILFSLENLLLALEATHFVGSRGSNWNRLIDELR 308
BLAST of mRNA_P-wetherbeei_contig9617.1.1 vs. uniprot
Match: A0A836CJ51_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ51_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 2.200e-16 Identity = 49/131 (37.40%), Postives = 69/131 (52.67%), Query Frame = 1 Query: 1 GDKYKEMSLKSWDENVALAEALAADRHF--SGRHIFLSTEDPEVVEEAIREEAWSVMVLPWRR--------------------GNENHEELMEMGDSLFIFSLVNLFLAAEAQHFVGTRSSNWNRLIDELR 327 GDK+KEM+L+SWD ++ A+ A R S R ++L+T+DP VVE A+ W+V VLP G + E+ D + +F+L L +A EA HFVG R S+W LID+LR Sbjct: 215 GDKWKEMNLQSWDAHLHAADVAARARGVPASQRFVYLTTDDPRVVESALATHGWTVYVLPCPLQADGSPLPCRTTDNTTNPAFGISDSEQGHADADEIMLFALEGLMIALEATHFVGQRGSSWTVLIDDLR 345
BLAST of mRNA_P-wetherbeei_contig9617.1.1 vs. uniprot
Match: A0A835Z6Q9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Q9_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 7.420e-15 Identity = 51/134 (38.06%), Postives = 65/134 (48.51%), Query Frame = 1 Query: 1 GDKYKEMSLKSWDENVALAEALAADRHF--SGRHIFLSTEDPEVVEEAIREEAWSVMVLP----------------------WRRGNENHEELMEMGDSLFIFSLVNLFLAAEAQHFVGTRSSNWNRLIDELRQ 330 GDK+KEM+L+SWD + A A R S R ++L+T+DP VVE A W+ VLP + G E H D + +FSL L +A EA HFVG R S+W LID LRQ Sbjct: 394 GDKWKEMTLQSWDAHEGAARDAARARGVPESRRAVYLTTDDPTVVESARATPGWTTYVLPCPVAADGALLPCRTTDNTTNPAFDAGTEGHMH----ADEITLFSLEGLMVALEATHFVGQRGSSWTVLIDNLRQ 523
BLAST of mRNA_P-wetherbeei_contig9617.1.1 vs. uniprot
Match: A0A7S4FRT0_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4FRT0_9EUGL) HSP 1 Score: 72.4 bits (176), Expect = 1.430e-12 Identity = 46/110 (41.82%), Postives = 60/110 (54.55%), Query Frame = 1 Query: 4 DKYKEMSLKSWDENVALAEALAADRHFSGRHIFLSTEDPEVVEEAIREEAWSVMVLPWRRGNENHEELMEM--GDSLFIFSLVNLFLAAEAQHFVGTRSSNWNRLIDELR 327 DK KEM L +A AE + A R IFLS+ED V++ A + W +P R N NHE ++ G L S++NL+ + +FVGTR SNW RLIDELR Sbjct: 344 DKKKEMDLLPLSYYMATAEKIRAIRP-QVTSIFLSSEDGTVIKAADKFPHWKFFTVPEARQNLNHEGFIQRFGGFRLMEISMMNLYFHMQCDYFVGTRMSNWCRLIDELR 452
BLAST of mRNA_P-wetherbeei_contig9617.1.1 vs. uniprot
Match: A0A7S1IAV2_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IAV2_9EUGL) HSP 1 Score: 65.1 bits (157), Expect = 4.880e-10 Identity = 43/110 (39.09%), Postives = 57/110 (51.82%), Query Frame = 1 Query: 4 DKYKEMSLKSWDENVALAEALAADRHFSGRHIFLSTEDPEVVEEAIREEAWSVMVLPWRRGNENHEELMEM--GDSLFIFSLVNLFLAAEAQHFVGTRSSNWNRLIDELR 327 DK KEM L +A AE + A + IFLS+ED V++ + W +P R N NHE + G +L S++NL + +FVGTR SNW RLIDE R Sbjct: 246 DKKKEMDLLPLSSYMAAAERIRALQPEVDT-IFLSSEDGVVIKATEKFPHWKFFTVPENRQNLNHEGFIARYGGFNLMEISMMNLHFHTQCDYFVGTRMSNWCRLIDESR 354
BLAST of mRNA_P-wetherbeei_contig9617.1.1 vs. uniprot
Match: A0A2K1JX85_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JX85_PHYPA) HSP 1 Score: 62.0 bits (149), Expect = 6.460e-9 Identity = 47/121 (38.84%), Postives = 60/121 (49.59%), Query Frame = 1 Query: 1 GDKYKEMSLKSWDENVALAEALAADR-HFSGRHIFLSTEDPEVVEEAIREEAWSVMVLPWRR----GNENHEELMEMG-------DSLFIFSLVNLFLAAEAQHFVGTRSSNWNRLIDELR 327 G+++KE + + + AE+L + R IFLSTEDPE V + + W V R GN H L D FI S++NL +A E FVG SSNWNRLIDELR Sbjct: 371 GNRWKEDRTANNEAFLQAAESLVNQYPNDLQRKIFLSTEDPETVGFFSKLDNWKVQYTTVSRVATDGNVTHPNLALNNFASRYGWDEEFINSILNLQIALECDGFVGQLSSNWNRLIDELR 491
BLAST of mRNA_P-wetherbeei_contig9617.1.1 vs. uniprot
Match: A0A812NJQ2_9DINO (FucT6 protein (Fragment) n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812NJQ2_9DINO) HSP 1 Score: 60.8 bits (146), Expect = 1.720e-8 Identity = 46/138 (33.33%), Postives = 64/138 (46.38%), Query Frame = 1 Query: 1 GDKYKEMSLKSWDENVALAEALAADRH----------------------FSGRHIFLSTEDPEVVEEAIR----EEAWSVMVLPWRRGNENHEELM---EMGDSLFIFSLVNLFLAAEAQHFVGTRSSNWNRLIDELR 327 G K+ E S+ ++ E ++ + LA D +SGR F+STEDP VV+EA++ E W V R N++ + E + +NL LA EA +V T SSNW RLIDELR Sbjct: 293 GRKWSEASMYNFTEYKSMLDHLADDSQDLRVLYAEVAESNATFSYPAEAYSGRKTFISTEDPRVVDEALKLCSAEPRWKVFYTKVNRSNDDPWTKIGSFEHARREILIGFMNLELALEADAWVCTLSSNWCRLIDELR 430
BLAST of mRNA_P-wetherbeei_contig9617.1.1 vs. uniprot
Match: A0A093Z1F2_9PEZI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Pseudogymnoascus sp. VKM F-3775 TaxID=1420901 RepID=A0A093Z1F2_9PEZI) HSP 1 Score: 60.8 bits (146), Expect = 1.740e-8 Identity = 47/126 (37.30%), Postives = 59/126 (46.83%), Query Frame = 1 Query: 1 GDKYKEMSLKSWDENVALAEALAADRHF-SGRHIFLSTEDPEVVEE--------------AIREEAWSVMVLPWRRGNENHEELMEMGD--SLFIFSLVNLFLAAEAQHFVGTRSSNWNRLIDELR 327 GDK EM L ++E V AE A+ S + FLSTEDP V+E+ + W +P R +L E G+ L I L+ L +A E FVGTR S WNRLID LR Sbjct: 901 GDKGSEMRLVPFNEYVVRAEKFTAENPLGSWKRAFLSTEDPNVIEQMKSMARVTPFLYSGSNARWTWYWSEIP-RLNTSPEIQLREFGNRTDLTIKWLLQLVMAIECDVFVGTRGSGWNRLIDSLR 1025
BLAST of mRNA_P-wetherbeei_contig9617.1.1 vs. uniprot
Match: A0A812J2B6_SYMPI (FucT6 protein (Fragment) n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812J2B6_SYMPI) HSP 1 Score: 60.1 bits (144), Expect = 2.790e-8 Identity = 38/89 (42.70%), Postives = 53/89 (59.55%), Query Frame = 1 Query: 82 FSGRHIFLSTEDPEVVEEAIR----EEAWSVMVLPWRRGNEN---HEELMEMGDSLFIFSLVNLFLAAEAQHFVGTRSSNWNRLIDELR 327 ++ R +FLSTED +VV+EA+R + W V+ RR N++ H + E + + +NL LA EA +V T SSNW RLIDELR Sbjct: 254 YTARKVFLSTEDQQVVDEALRLCGGKPRWEVIYTRVRRSNDDAWVHAKKPEDARYEVLNAFMNLELALEADAWVCTLSSNWCRLIDELR 342 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9617.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig9617.1.1 >prot_P-wetherbeei_contig9617.1.1 ID=prot_P-wetherbeei_contig9617.1.1|Name=mRNA_P-wetherbeei_contig9617.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=104bp MSLKSWDENVALAEALAADRHFSGRHIFLSTEDPEVVEEAIREEAWSVMVback to top mRNA from alignment at P-wetherbeei_contig9617:7..336- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig9617.1.1 ID=mRNA_P-wetherbeei_contig9617.1.1|Name=mRNA_P-wetherbeei_contig9617.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=330bp|location=Sequence derived from alignment at P-wetherbeei_contig9617:7..336- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig9617:7..336- >mRNA_P-wetherbeei_contig9617.1.1 ID=mRNA_P-wetherbeei_contig9617.1.1|Name=mRNA_P-wetherbeei_contig9617.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=312bp|location=Sequence derived from alignment at P-wetherbeei_contig9617:7..336- (Phaeothamnion wetherbeei SAG_119_79)back to top |