mRNA_P-wetherbeei_contig9610.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig9610.1.3 vs. uniprot
Match: A0A485KK26_9STRA (Aste57867_8367 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KK26_9STRA) HSP 1 Score: 203 bits (517), Expect = 8.890e-55 Identity = 112/241 (46.47%), Postives = 139/241 (57.68%), Query Frame = 2 Query: 581 VRPLYVCGDSHTLPMAWCVIHAPQLDARSAKSPPGAAERAKATPRKPAPKMAAVADDVVAIAVAPAPSPLLCRYLLTPALVTGLKHWHLRPANDFYPKAQFYAVTGAIPRGAAVIFVFGEIDCREGLLVAVERGRYDSLEQAAAETVRLFVDAALTLVRERGFVAFVHPVVPVLNETRRIVTLYNHVLRAQVEAVAPELQWLEFFEGMLTADRKQLRPEIALDGTHLSPAYQTLLETALRR 1303 RP+YVCGDSHTL AW VI D +L P+LVTGLKHWHLRP + FYPK FY V IP GA V+F+FGEIDCREGLL+AVE+ RY++L++ +T+ +F+D TLVR+RGF A+VHP+VPVLNETR IV YN + +V+A A QWL+FF+ +LT K L+P LDGTHL PAY LL A+ R Sbjct: 539 TRPIYVCGDSHTLATAWRVISVHGHDR-----------------------------------------------VLVPSLVTGLKHWHLRPESTFYPKVNFYNVVQTIPHGADVVFLFGEIDCREGLLLAVEKCRYETLDEGMTKTISIFMDVLQTLVRDRGFRAYVHPIVPVLNETRPIVQQYNAHFKRKVDASACA-QWLDFFDALLTPAHK-LQPSFELDGTHLHPAYLDLLAHAIER 730
BLAST of mRNA_P-wetherbeei_contig9610.1.3 vs. uniprot
Match: A0A7S2D3K4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D3K4_9STRA) HSP 1 Score: 177 bits (450), Expect = 1.210e-49 Identity = 91/172 (52.91%), Postives = 115/172 (66.86%), Query Frame = 2 Query: 800 YLLTPALVTGLKHWHLRPANDFYPKAQFYAVTGAIPRGAAVIFVFGEIDCREGLLVAVERGRYDSLEQAAAETVRLFVDAALTLVRERGFVAFVHPVVPVLNETRRIVTLYNHVLRAQVEAVAPELQWLE-FFEGML-----TADRKQLRPEIALDGTHLSPAYQTLLETAL 1297 +LL P LVTGLKHWHLR A DFYPK FY V IP GA V+F+FGEIDCREG+LVAVE+GRY+++E+ T+ F+ A + + R + F F+HPV PVLNETR + YN + R +V P L WLE E ML + +K LRP++ALDGTHL P+Y L+ AL Sbjct: 50 HLLRPQLVTGLKHWHLREATDFYPKKNFYRVVDGIPDGANVVFMFGEIDCREGILVAVEKGRYETVEEGMLVTMNFFLKAVVEVQRRKKFRVFIHPVNPVLNETRHLCMAYNKIYRRRVRET-PGLHWLENVAERMLVGGEGSTQKKTLRPDLALDGTHLHPSYLKLVSEAL 220
BLAST of mRNA_P-wetherbeei_contig9610.1.3 vs. uniprot
Match: A0A6G0XEV1_9STRA (TPR_5 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XEV1_9STRA) HSP 1 Score: 187 bits (475), Expect = 5.380e-49 Identity = 101/243 (41.56%), Postives = 138/243 (56.79%), Query Frame = 2 Query: 584 RPLYVCGDSHTLPMAWCVIHAPQLDARSAKSPPGAAERAKATPRKPAPKMAAVADDVVAIAVAPAPSPLLCRYLLTPALVTGLKHWHLRPANDFYPKAQFYAVTGAIPRGAAVIFVFGEIDCREGLLVAVERGRYDSLEQAAAETVRLFVDAALTLVRERGFVAFVHPVVPVLNETRRIVTLYNHVLRAQVEAVAPELQWLEFFEGMLTADRKQLRPEIALDGTHLSPAYQTLLETALRRCTA 1312 +P+YVCGDSH+L AW + + + L PALVTGLKHWHLR ++FYPKA F+ + IP GA+V+F+FGEIDCREG+LVAVE+ RY+S+++ T+ +F+D LVR RGF A++HP+VPVLNETR +V LYN + V+A + +WL+F++ LT+D K L+P LDGTHL P+Y L AL T+ Sbjct: 516 QPVYVCGDSHSLATAWRSVSVHGQE-----------------------------------------------HFLCPALVTGLKHWHLRKESNFYPKANFFNMVKTIPSGASVVFLFGEIDCREGILVAVEKCRYESIDEGMIRTISIFMDVLCDLVRTRGFRAYIHPIVPVLNETRHLVQLYNSHFKRLVDA-SSFCKWLDFYDVFLTSDNK-LQPAYELDGTHLHPSYLQHLGIALEAVTS 709
BLAST of mRNA_P-wetherbeei_contig9610.1.3 vs. uniprot
Match: A0A7S3BBD6_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BBD6_9EUKA) HSP 1 Score: 172 bits (435), Expect = 5.880e-48 Identity = 93/166 (56.02%), Postives = 110/166 (66.27%), Query Frame = 2 Query: 800 YLLTPALVTGLKHWHLRPANDFYPKAQFYAVTGAIPRGAAVIFVFGEIDCREGLLVAVERGRYDSLEQAAAETVRLFVDAALTLVRERGFVAFVHPVVPVLNETRRIVTLYNHVLRAQVEAVAPELQWLEFFEGMLTADRKQLRPEIALDGTHLSPAYQTLLETAL 1297 +LL PAL TG K WHLR +DF+PKA F AIP+ + VIF FGEIDCREGLLVAVER RY+SLE TV +++ L RER F VHPV PVLNETR IV L+N L A V A P+L +L+FF+ +L+ D L +ALDGTHL P Y LLE AL Sbjct: 26 HLLRPALATGCKIWHLRKESDFFPKANFEVAISAIPQKSPVIFCFGEIDCREGLLVAVERCRYESLEAGVDFTVGIYIGKLKQLARERQFRVMVHPVAPVLNETRHIVKLFNARLAAAVRA-EPDLLYLDFFDELLSPDGNALADGLALDGTHLHPDYVKLLEKAL 190
BLAST of mRNA_P-wetherbeei_contig9610.1.3 vs. uniprot
Match: D7FIV7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIV7_ECTSI) HSP 1 Score: 186 bits (471), Expect = 6.810e-48 Identity = 107/247 (43.32%), Postives = 132/247 (53.44%), Query Frame = 2 Query: 557 GDIGEDGCVRPLYVCGDSHTLPMAWCVIHAPQLDARSAKSPPGAAERAKATPRKPAPKMAAVADDVVAIAVAPAPSPLLCRYLLTPALVTGLKHWHLRPANDFYPKAQFYAVTGAIPRGAAVIFVFGEIDCREGLLVAVERGRYDSLEQAAAETVRLFVDAALTLVRERGFVAFVHPVVPVLNETRRIVTLYNHVLRAQVEAVAPELQWLEFFEGMLTADRKQLRPEIALDGTHLSPAYQTLLETAL 1297 GD +D +YVCGDSHTL AW H + + R +L PALVTGLKHWHLRP +DFYPK F +V +P G+AV+F+ GEIDCREG+LVAVE+ RY + E+ TV +F+ A L RERG FVHPV+PVL+ETR +V YN V R V+ + L WL+FFE +L LRP LDGTHL+ Y LLE AL Sbjct: 647 GDGSDD--KEAVYVCGDSHTLTPAW---HEVTVGGK--------------------------------------------RRVLRPALVTGLKHWHLRPESDFYPKRNFESVMAKVPNGSAVVFILGEIDCREGILVAVEKLRYKTAEEGIEHTVGIFIKVAEALSRERGLRIFVHPVIPVLDETRGMVKTYNRVFRRMVDK-SKHLHWLDFFEQLLDDTGSSLRPNFRLDGTHLAAGYVGLLEKAL 843
BLAST of mRNA_P-wetherbeei_contig9610.1.3 vs. uniprot
Match: A0A7S1U1R8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U1R8_9STRA) HSP 1 Score: 173 bits (439), Expect = 1.120e-47 Identity = 97/244 (39.75%), Postives = 129/244 (52.87%), Query Frame = 2 Query: 581 VRPLYVCGDSHTLPMAWCVIHAPQLDARSAKSPPGAAERAKATPRKPAPKMAAVADDVVAIAVAPAPSPLLCRYLLTPALVTGLKHWHLRPANDFYPKAQFYAVTGAIPRGAAVIFVFGEIDCREGLLVAVERGRYDSLEQAAAETVRLFVDAALTLVRERGFVAFVHPVVPVLNETRRIVTLYNHVLRAQVEAVAPE---LQWLEFFEGMLTADRKQLRPEIALDGTHLSPAYQTLLETALRR 1303 V PLYVCGDSH++ AW + +A PR L P LVTGLKHWHLRP +FYPK F ++P GA I +FGEIDCREG+LVAV++GRY+S+E A T+ +F L+ RGF F+HPV+PVLNETR +V YN R + A A + + WL+F +L +LR ++ LDGTH+ P+Y L+E AL++ Sbjct: 55 VEPLYVCGDSHSITPAWSWVTC-----------------GEAGPRP-----------------------------LVPRLVTGLKHWHLRPETNFYPKYNFLRAMESLPDGADAIMIFGEIDCREGILVAVDKGRYESVEDGIAHTLDIFFSVLDGLLESRGFRVFMHPVLPVLNETRAMVAKYNEQFRRRTLAAAAQGKRVHWLDFEGELLDGASGKLRADLELDGTHIHPSYLALVEAALQQ 252
BLAST of mRNA_P-wetherbeei_contig9610.1.3 vs. uniprot
Match: A0A024UQ64_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UQ64_9STRA) HSP 1 Score: 183 bits (465), Expect = 1.450e-47 Identity = 109/239 (45.61%), Postives = 131/239 (54.81%), Query Frame = 2 Query: 581 VRPLYVCGDSHTLPMAWCVIHAPQLDARSAKSPPGAAERAKATPRKPAPKMAAVADDVVAIAVAPAPSPLLCRYLLTPALVTGLKHWHLRPANDFYPKAQFYAVTGAIPRGAAVIFVFGEIDCREGLLVAVERGRYDSLEQAAAETVRLFVDAALTLVRERGFVAFVHPVVPVLNETRRIVTLYNHVLRAQVEAVAPELQWLEFFEGMLTADRKQLRPEIALDGTHLSPAYQTLLETAL 1297 +P+YVCGDSH L AW RS K +T R LL PALVTGLKHWHLR + FYPK F+ V IPRGA V+F+FGEIDCREGLLVAVE+ RY++L A TV +F+D LV GF A +HPVVPVLNETR IV YN V +A+V A + W++ F+ +LT QL+ ALDGTHL P+Y L AL Sbjct: 525 AKPIYVCGDSHALATAW----------RSVK--------VHSTER-----------------------------LLIPALVTGLKHWHLRHESTFYPKVHFFNVVNTIPRGATVVFIFGEIDCREGLLVAVEKCRYETLGDGIAHTVSIFMDVLERLVATHGFHALIHPVVPVLNETRHIVQQYNRVFQARV-AASGFCNWMDIFDSLLTPTY-QLQEAYALDGTHLHPSYLHLWTDAL 714
BLAST of mRNA_P-wetherbeei_contig9610.1.3 vs. uniprot
Match: A0A7S2DEJ8_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2DEJ8_9EUKA) HSP 1 Score: 180 bits (456), Expect = 3.180e-46 Identity = 92/166 (55.42%), Postives = 113/166 (68.07%), Query Frame = 2 Query: 800 YLLTPALVTGLKHWHLRPANDFYPKAQFYAVTGAIPRGAAVIFVFGEIDCREGLLVAVERGRYDSLEQAAAETVRLFVDAALTLVRERGFVAFVHPVVPVLNETRRIVTLYNHVLRAQVEAVAPELQWLEFFEGMLTADRKQLRPEIALDGTHLSPAYQTLLETAL 1297 +LL P LVTG K WHLR ++DF+ +A F AIP G+ V+F+FGEIDCREGLLVAVER RY +LE A TV+++++ TL RER F VHPV PVLNETR IV +N L+A V P L WL+FF +LT D LR +ALDGTHL P+Y + LE AL Sbjct: 579 HLLVPRLVTGCKIWHLRESSDFFTRANFEVAMKAIPNGSPVVFIFGEIDCREGLLVAVERMRYPNLEAGIAFTVKIYINVLKTLARERKFKIMVHPVPPVLNETRHIVKPFNAQLKAAVTK-EPSLHWLDFFSDLLTPDGNSLRDGLALDGTHLDPSYTSYLEKAL 743
BLAST of mRNA_P-wetherbeei_contig9610.1.3 vs. uniprot
Match: A0A5D6XW42_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XW42_9STRA) HSP 1 Score: 179 bits (455), Expect = 4.600e-46 Identity = 103/238 (43.28%), Postives = 134/238 (56.30%), Query Frame = 2 Query: 590 LYVCGDSHTLPMAWCVIHAPQLDARSAKSPPGAAERAKATPRKPAPKMAAVADDVVAIAVAPAPSPLLCRYLLTPALVTGLKHWHLRPANDFYPKAQFYAVTGAIPRGAAVIFVFGEIDCREGLLVAVERGRYDSLEQAAAETVRLFVDAALTLVRERGFVAFVHPVVPVLNETRRIVTLYNHVLRAQVEAVAPELQWLEFFEGMLT--ADRKQLRPEIALDGTHLSPAYQTLLETAL 1297 ++VCGDSHTL AW I R + P +L PALVTGLKHWHLR FYPKA F+ V G +P + V+F+FGEIDCREG+L+AVE+ Y+S+E+ A T+++F++A VR GF A VHPVVPVLNETR +V YN + + +V+ A WL+F + +L + R+QLRPE ALDGTHL P Y T LE A+ Sbjct: 553 IFVCGDSHTLATAWREI------------------RVRGEP-----------------------------VVLRPALVTGLKHWHLRKHAVFYPKANFWRVLGNLPPRSTVVFLFGEIDCREGILLAVEKCTYESVEEGMAATIQIFMEALKDAVRRFGFEALVHPVVPVLNETRALVVQYNRIFKQRVDESA-FCSWLDFSDDLLEPGSSREQLRPEFALDGTHLHPRYLTSLERAV 742
BLAST of mRNA_P-wetherbeei_contig9610.1.3 vs. uniprot
Match: W4HE00_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HE00_9STRA) HSP 1 Score: 176 bits (446), Expect = 6.830e-45 Identity = 105/256 (41.02%), Postives = 135/256 (52.73%), Query Frame = 2 Query: 590 LYVCGDSHTLPMAWCVIHAPQLDARSAKSPPGAAERAKATPRKPAPKMAAVADDVVAIAVAPAPSPLLCRYLLTPALVTGLKH-----------W---------HLRPANDFYPKAQFYAVTGAIPRGAAVIFVFGEIDCREGLLVAVERGRYDSLEQAAAETVRLFVDAALTLVRERGFVAFVHPVVPVLNETRRIVTLYNHVLRAQVEAVAPELQWLEFFEGMLTADRKQLRPEIALDGTHLSPAYQTLLETAL 1297 +YVCGDSH L AW + A ++L PALVTGLKH W HLR + FYPK F+ V +IPRGA V+FVFGEIDCREGLLVAVE+ RY++LE+ A T+ +F+D LVRE GF AF+HP+VPVL+ETR IV LYN + +A+V+ + W++FF+ +LT K L+P LDGTHL P+Y +L T L Sbjct: 524 IYVCGDSHALATAWRSVGA---------------------------------------------------HVLVPALVTGLKHCTTFDCLYDPLWTYNGTLHTGHLRKTSTFYPKVHFFNVIKSIPRGATVVFVFGEIDCREGLLVAVEKCRYETLEEGMAHTMSIFMDVVEDLVREFGFKAFIHPIVPVLDETRHIVQLYNRLFQAKVQG-STLCHWMDFFDSLLTPYNK-LQPSYVLDGTHLHPSYLSLWATTL 726 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9610.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig9610.1.3 >prot_P-wetherbeei_contig9610.1.3 ID=prot_P-wetherbeei_contig9610.1.3|Name=mRNA_P-wetherbeei_contig9610.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=437bp MMFIRCRRCCCCCLHCFHFAFLIRSYSPAHYFCLLLRKDSGRRLLNFCVRback to top mRNA from alignment at P-wetherbeei_contig9610:667..2510+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig9610.1.3 ID=mRNA_P-wetherbeei_contig9610.1.3|Name=mRNA_P-wetherbeei_contig9610.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1844bp|location=Sequence derived from alignment at P-wetherbeei_contig9610:667..2510+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig9610:667..2510+ >mRNA_P-wetherbeei_contig9610.1.3 ID=mRNA_P-wetherbeei_contig9610.1.3|Name=mRNA_P-wetherbeei_contig9610.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1311bp|location=Sequence derived from alignment at P-wetherbeei_contig9610:667..2510+ (Phaeothamnion wetherbeei SAG_119_79)back to top |