mRNA_P-wetherbeei_contig9601.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig9601.1.1 vs. uniprot
Match: I0Z3F2_COCSC (Threonylcarbamoyl-AMP synthase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z3F2_COCSC) HSP 1 Score: 124 bits (310), Expect = 4.990e-26 Identity = 67/140 (47.86%), Postives = 88/140 (62.86%), Query Frame = 2 Query: 998 RLYVPGPEDIGCLLRVRCTPISGDGR-RGRPAAYFLLTA----VAAGWPPALLALRGALTATPLAPPGMRLVSYNVLADKYCTGRFADQQLYPYCPRRYREMSHRAPLILQELLGYNADVVCLQECDAKLFKKVLQPVFA 1402 R+Y P ED G LR++CTP G G G A+ +T V AG A R A T+TPLAPPG+R+V+YN+LAD+Y + +A + L+ YCPR Y +R PLI+QE+LGYNADV+CLQE D K F QP+ + Sbjct: 243 RVYSPIAEDAGHRLRLQCTPWRGSGSAHGEAASGKPVTVETDPVTAGPAFTAAAQRQAHTSTPLAPPGVRVVTYNILADQYASTDYAQEHLFAYCPREYMVPEYRRPLIMQEILGYNADVICLQEVDGKAFTTFFQPLMS 382
BLAST of mRNA_P-wetherbeei_contig9601.1.1 vs. uniprot
Match: A0A8J9WI03_9CHLO (2',5'-phosphodiesterase 12 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WI03_9CHLO) HSP 1 Score: 116 bits (290), Expect = 1.610e-23 Identity = 59/141 (41.84%), Postives = 83/141 (58.87%), Query Frame = 2 Query: 998 RLYVPGPEDIGCLLRVRCTPISG------DGRRGRPAAYFLLTAVAAGWPPALLALRGALTATPLAPPGMRLVSYNVLADKYCTGRFADQQLYPYCPRRYREMSHRAPLILQELLGYNADVVCLQECDAKLFKKVLQPVFA 1402 R+Y P ED G LRV C P G + G P + + PA A R A T+ P+APP +R+V+YN+LAD+Y + +A Q L+ YCP+++ +R PLI+QE+LGYNAD++CLQE D K F QP+ + Sbjct: 252 RVYTPTAEDAGHRLRVECIPTRGSNSSHGEAAAGEPVSLVTEVVITGPAHPAA-AQRHAHTSMPIAPPAVRVVTYNILADQYASTDYAQQHLFAYCPKQFMVPEYRRPLIMQEILGYNADIICLQEVDEKAFATYFQPLMS 391
BLAST of mRNA_P-wetherbeei_contig9601.1.1 vs. uniprot
Match: A0A6H5JRV9_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRV9_9PHAE) HSP 1 Score: 114 bits (286), Expect = 4.550e-23 Identity = 105/292 (35.96%), Postives = 137/292 (46.92%), Query Frame = 2 Query: 662 VVVNMAAVATLKVAVTQPVVGCPLVPEAELEHADGGTEWEWLRQEPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAADYAAVTLAESDAPAVTLVGSSRLYVPGPEDIGCLLRVRCTPISGDGRRGRPAAYFLLTAVAAGWPPALLALR-----------------GALTATPLAP--------------PG--------------MRLVSYNVLADKYCTGRFADQQLYPYCPRRYREMSHRAPLILQELLGYNADVVCLQECDAKLFKKVLQPVFA 1402 VVVN AV +L+ ++ QP+ G +V +AE+E G WEWL +E XXXXXXXXXXXXXXXXXX + +VG R Y P D+G L VRCTP+ +GRRGRP L + V G P LALR G+ LA PG +R++ YN+LAD YCT AD+ LYPYCP+ YR M +R ++ +E+ G+ AD++ LQEC+AK F + L P A Sbjct: 239 VVVNPPAVTSLECSIAQPMAGFSVVAQAEVEFGTG-MGWEWLIEEXXXXXXXXXXXXXXXXXXXXADGLSRRGGRAGGDNGSRTKGGQLFTGARGFS---------RVVGRMRAYTPVDADVGLRLMVRCTPMGAEGRRGRPVVRVLTSPVRPGRAPGPLALRRRWLEEREGAVYGGGGEGSREIEGLADGTEGGVREGGGRVLPGGAAAVGGTRKRRRRLRVMCYNILADMYCTSEQADEVLYPYCPKEYRAMDYRMQMVAREVRGHAADLIMLQECEAKAFDRYLSPGLA 520
BLAST of mRNA_P-wetherbeei_contig9601.1.1 vs. uniprot
Match: UPI001885AF48 (2',5'-phosphodiesterase 12 n=1 Tax=Syngnathus acus TaxID=161584 RepID=UPI001885AF48) HSP 1 Score: 111 bits (278), Expect = 2.770e-22 Identity = 62/140 (44.29%), Postives = 76/140 (54.29%), Query Frame = 2 Query: 986 VGSSRLYVPGPEDIGCLLRVRCTPISGDGRRGRPAAYFLLTAVAAGWPPALLALRGALTATPLAPPGMRLVSYNVLADKYCTGRFADQQLYPYCPRRYREMSHRAPLILQELLGYNADVVCLQECDAKLFKKVLQPVFAA 1405 VG SR+YVP +DIGC L++ CTP G GR GRP V AG R TA A P +R+VSYN+LAD Y + LYPYC ++ +R LI +EL GY ADV+CLQE D +F L P A Sbjct: 212 VGRSRVYVPSNQDIGCQLKLLCTPKDGLGRNGRPLELLSADGVEAGPGACTFDGRHMYTAKETAWPSLRVVSYNILADVYAQTELSKTVLYPYCAPYALQLDYRQNLIKKELTGYRADVICLQEVDKGVFLDSLTPALDA 351
BLAST of mRNA_P-wetherbeei_contig9601.1.1 vs. uniprot
Match: A0A2P6VNC5_9CHLO (Threonylcarbamoyl-AMP synthase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VNC5_9CHLO) HSP 1 Score: 111 bits (278), Expect = 4.790e-22 Identity = 60/144 (41.67%), Postives = 81/144 (56.25%), Query Frame = 2 Query: 992 SSRLYVPGPEDIGCLLRVRCTPISGDGRRGRPAA-----YFLLTAVAAGWPPALLALRGALTATPLAPPGMRLVSYNVLADKYCTGRFADQQLYPYCPRRYREMSHRAPLILQELLGYNADVVCLQECDAKLFKKVLQPVFAAK 1408 +SR Y P PED+GC LRV CTP G A + V PA +A R ALT A P +R+V+YN+LAD+Y A ++ +CP ++ + +R PL+L ELLG+NAD++CLQE D K F L P AA+ Sbjct: 181 TSRRYTPAPEDVGCHLRVECTPARPSSEPGEEAVLGEGGFADCGPVGVPPAPAAVAPRHALTRQQTAAPELRVVTYNILADQYAATETAKNVIFAHCPPQFLKPEYRWPLVLNELLGFNADLICLQEVDEKAFTAYLAPQLAAE 324
BLAST of mRNA_P-wetherbeei_contig9601.1.1 vs. uniprot
Match: A0A6A4WMM0_AMPAM (2',5'-phosphodiesterase 12 n=6 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4WMM0_AMPAM) HSP 1 Score: 110 bits (274), Expect = 9.710e-22 Identity = 60/139 (43.17%), Postives = 80/139 (57.55%), Query Frame = 2 Query: 983 LVGSSRLYVPGPEDIGCLLRVRCTPISGDGRRGRPAAYFLLTAVAAGWPPALLALRGALTATPLAPPGMRLVSYNVLADKYCTGRFADQQLYPYCPRRYREMSHRAPLILQELLGYNADVVCLQECDAKLFKKVLQPVF 1399 +VGSS Y+P EDIG LR+ C P++G+ RRG V AG P R A T T R+VSYN+LAD Y F L+PYCP + +R LI++EL+GYN D+VCLQE D K+++ L+P+F Sbjct: 233 VVGSSHSYMPSAEDIGHRLRLVCVPVNGE-RRGETVTVVSEQDVQAGPGPCPFDQRHAFTRTVTCQDSYRVVSYNILADLYADSDFTRTVLHPYCPPYALNIDYRKQLIVKELMGYNGDIVCLQEVDKKVYEGDLEPMF 370
BLAST of mRNA_P-wetherbeei_contig9601.1.1 vs. uniprot
Match: D7FYP3_ECTSI (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYP3_ECTSI) HSP 1 Score: 109 bits (273), Expect = 1.570e-21 Identity = 66/186 (35.48%), Postives = 88/186 (47.31%), Query Frame = 2 Query: 983 LVGSSRLYVPGPEDIGCLLRVRCTPISGDGRRGRPAAYFLLTAVAAGWPPALLALR-----------------GALTATPLAPPG-----------------------------MRLVSYNVLADKYCTGRFADQQLYPYCPRRYREMSHRAPLILQELLGYNADVVCLQECDAKLFKKVLQPVFA 1402 +VG R Y P D+G L VRCTP+ +GRRGRP L + V G P LALR G+ LA G +R++ YN+LAD YCT AD+ LYPYCP+ YR M +R ++ +E+ G+ AD++ LQEC+AK F + L P A Sbjct: 162 VVGRMRAYTPVDADVGLRLMVRCTPMGLEGRRGRPVVRVLTSPVRPGRVPGPLALRRHWLEERGGGVYGGGGEGSTETEGLADDGTEGGVREGGGRALPGGAAAVGGTIRRRCRLRVMCYNILADMYCTSEQADKVLYPYCPKEYRAMDYRMQMVAREVRGHAADLIMLQECEAKAFDRFLSPGLA 347
BLAST of mRNA_P-wetherbeei_contig9601.1.1 vs. uniprot
Match: H2MSR9_ORYLA (Phosphodiesterase 12 n=5 Tax=Oryzias TaxID=8089 RepID=H2MSR9_ORYLA) HSP 1 Score: 108 bits (269), Expect = 3.560e-21 Identity = 61/142 (42.96%), Postives = 81/142 (57.04%), Query Frame = 2 Query: 980 TLVGSSRLYVPGPEDIGCLLRVRCTPISGDGRRGRPAAYFLLTAVAAGWPPALLALRGALTATPLAPPGMRLVSYNVLADKYCTGRFADQQLYPYCPRRYREMSHRAPLILQELLGYNADVVCLQECDAKLFKKVLQPVFAA 1405 T VGS+R++VP +DIGC L++RCTP G GR G ++AV AG R A TA A P +R+VSYN+LAD Y + LYPYC ++ +R L+ +EL GYN D++CLQE D +F L P A Sbjct: 203 TRVGSARVHVPSNQDIGCRLKLRCTPKEG-GRSGPAKELVSVSAVEAGPGVCTFDGRHAYTAKEAAWPAVRVVSYNILADIYAQTELSKTVLYPYCAPYALQLDYRQNLVKKELAGYNGDILCLQEVDKGVFADSLSPALDA 343
BLAST of mRNA_P-wetherbeei_contig9601.1.1 vs. uniprot
Match: H3DJE5_TETNG (Phosphodiesterase 12 n=1 Tax=Tetraodon nigroviridis TaxID=99883 RepID=H3DJE5_TETNG) HSP 1 Score: 107 bits (267), Expect = 6.320e-21 Identity = 63/140 (45.00%), Postives = 76/140 (54.29%), Query Frame = 2 Query: 986 VGSSRLYVPGPEDIGCLLRVRCTPISGDGRRGRPAAYFLLTAVAAGWPPALLALRGALTATPLAPPGMRLVSYNVLADKYCTGRFADQQLYPYCPRRYREMSHRAPLILQELLGYNADVVCLQECDAKLFKKVLQPVFAA 1405 VG +R+YVP D+GC LR+ CTP DG RG LL AV AG R T A P +R+VSYNVLAD Y + LYPYC ++ +R LI +EL GYNAD+VCLQE D +F L P A Sbjct: 206 VGDTRVYVPSNRDVGCRLRLVCTP--RDGARGPSKELLLLGAVEAGPGTCTFDTRHMYTVKGTAWPTVRVVSYNVLADVYAQTELSKTVLYPYCAPYALQLDYRQNLIKKELSGYNADIVCLQEVDKGVFADSLTPALDA 343
BLAST of mRNA_P-wetherbeei_contig9601.1.1 vs. uniprot
Match: A0A3M7KV88_AUXPR (Threonylcarbamoyl-AMP synthase (Fragment) n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A3M7KV88_AUXPR) HSP 1 Score: 107 bits (268), Expect = 7.800e-21 Identity = 99/302 (32.78%), Postives = 130/302 (43.05%), Query Frame = 2 Query: 554 SVDVAGLTN-ASWVACATGRRLALEISFKDGDVGRFAVVVNMAAVATLKVAVTQPVVGCPLVPEAELEHAD-GGTEWEWLRQEPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAADYAAVTLAESDAPAVTLV-GSSRLYVPGPEDIGCLLRVRCTPISGDGRRGRPAAYFLLTAVAAGWPPALLALRG-------------ALTATPLA------PPGMRLVSYNVLADKYCTGRFADQQLYPYCPRRYREMSHRAPLILQELLGYNADVVCLQECDAKLFKKVLQP 1393 S+D + +TN A+WV TG L L G+ R ++ N +A L V VG PLVP +L AD WEW Q PP A+V PA + G R Y+P PED+G L+RVRCTP GRRG+ A A W A LA+ G A P A PP +R+VSYN+LAD+Y A L+ +CP +Y +HR PLIL +LL + AD++CLQE D F+ +L+P Sbjct: 83 SLDASSVTNEAAWV---TGHVLQL------GE-ARLPILRNPPLIAKLDV-YGDAFVGIPLVPVPQLLFADEDACSWEWEVQRPP----------------------------------------------ASVWTRVGGDPACSAGRGVQRTYIPTPEDVGALVRVRCTP----GRRGKGGA-------APTWGEAALAVAGGRVQPHPATQPGPAKVCIPPARLEATVPPRLRVVSYNILADQYAATERAKSVLFGHCPEKYLRPTHRRPLILGQLLEFQADILCLQEVDESAFRGLLEP 316 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9601.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig9601.1.1 >prot_P-wetherbeei_contig9601.1.1 ID=prot_P-wetherbeei_contig9601.1.1|Name=mRNA_P-wetherbeei_contig9601.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=276bp MAAVATLKVAVTQPVVGCPLVPEAELEHADGGTEWEWLRQEPPAALAAPAback to top mRNA from alignment at P-wetherbeei_contig9601:508..2456- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig9601.1.1 ID=mRNA_P-wetherbeei_contig9601.1.1|Name=mRNA_P-wetherbeei_contig9601.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1949bp|location=Sequence derived from alignment at P-wetherbeei_contig9601:508..2456- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig9601:508..2456- >mRNA_P-wetherbeei_contig9601.1.1 ID=mRNA_P-wetherbeei_contig9601.1.1|Name=mRNA_P-wetherbeei_contig9601.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=828bp|location=Sequence derived from alignment at P-wetherbeei_contig9601:508..2456- (Phaeothamnion wetherbeei SAG_119_79)back to top |