mRNA_P-wetherbeei_contig960.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig960.2.1
Unique NamemRNA_P-wetherbeei_contig960.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig960.2.1 vs. uniprot
Match: D8LQZ5_ECTSI (RECA_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQZ5_ECTSI)

HSP 1 Score: 175 bits (444), Expect = 7.960e-46
Identity = 166/535 (31.03%), Postives = 227/535 (42.43%), Query Frame = 1
Query:   64 MPRLSLLGVDEATRAALARLRAPVMTAESLLTRPPERLAEELNVSLRAVRRLQYKVACKCQTRRSV--HLSYEKSGDADSSDSAGGHSQEERNGQRCS-------------------SP----------------------SFQSAAALYRMMWDQGGFSSSGSPRVDALLLGGIMRHQVTEVVGDSASGKSQLCMTAAVCTAWGGAHVLFIDTGRSADAVRMREIAMERFGR---DLSDNELTALLAHIRVQVAHDVYAVLAALEGFHEAVASGRTSGKMAVGPTTATAXXXXXXXXXXXXXXXXTGARAWQRSQCGGSSGGGANGESAMPSQWQTRSQAADYSGGSADXXXXXXXXXXXSYRDASASTASKEAREDWHLGCRLVILDSATAVLGPIVGGDKNVQGHGMMASLGHTLNKIATRCSVGVLVTNNTVSDRRMAPAGGCSGFGRFGNCGNPDSFRPGSYTTGQPSDMETKPALGPTWAYVASARLFLQHHDSAA--LTGAGERKGR----------RTANLVKHSAR 1494
            MPRL  +G+DE T   LA L  P++ AESLL+R PE+LA E  VS++AV +L+Y VA +CQ +  V    + E +GD  ++ +  GH  E + G   S                   SP                      SF+SA ALYR   D GGF ++GS  +D LL  G+M H V EVVG S+SGK+QLC+TAAV  A  G  VL+IDT       RM++IA  R+     +++  ++ ALL  +RV  A D+  V++AL  + + V  G  +G                                                                                   Y D                 CRLVILDS TAV+ P++GG KN  GHG+MASLGH LN+ A++CS  VLV N+TV+ R ++   G                               + ALG TW  V S R+ L    +AA   +G+G+  G           RTA L+KH A+
Sbjct:    1 MPRLDRMGLDERTLGVLASLPVPIVLAESLLSRDPEQLALECGVSMKAVSKLRYLVALRCQPQPPVPDRRAPEDNGDG-ATPNTQGHGGEGKRGAGSSTXXXXXXXXXXXXXXXXXXSPRRIGXXXXXXXXXXXXXXPPLLSFESADALYRQARDVGGFVTTGSDSLDNLLCKGLMLHHVVEVVGRSSSGKTQLCLTAAVAAASHGIGVLYIDTANGCSVRRMQQIARSRYADANGEMTARQMDALLDRLRVVRAFDISRVMSALVAYIDGVMEGGRNGV----------------------------------------------------------------------------------YSD-----------------CRLVILDSVTAVISPLLGGFKNPAGHGLMASLGHLLNRAASQCSACVLVANSTVAPRGISEEEG------------------------------PRAALGLTWEGVPSIRVLLAEASAAAGGASGSGDAGGADHGTVGEASPRTATLLKHPAQ 405          
BLAST of mRNA_P-wetherbeei_contig960.2.1 vs. uniprot
Match: A0A835YM23_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM23_9STRA)

HSP 1 Score: 127 bits (320), Expect = 9.340e-29
Identity = 144/500 (28.80%), Postives = 184/500 (36.80%), Query Frame = 1
Query:   64 MPRLSLLGVDEATRAALARLRAPVMTAESLLTRPPERLAEELNVSLRAVRRLQYKVACKCQTRRSVHLSYEKSGDADSSDSAGGHSQEERNGQRCSSPSFQSAAALYRMMWDQGGFSSSGSPRVDALLLGGIMRHQVTEVVGDSASGKSQLCMTAAVCTAWGGAHVLFIDTGRSADAVRMREIAMERFGRDLSDNELTALLAHIRVQVAHDVYAVLAALEGFHEAVASGRTSGKMAVGPTTATAXXXXXXXXXXXXXXXXTGARAWQRSQCGGSSGGGANGESAMPSQWQTRSQAADYSGGSADXXXXXXXXXXXSYRDASASTASKEAREDWHLGCRLVILDSATAVLGPIVGGDKNVQGHGMMASLGHTLNKIATRCSVGVLVTNNTVSDRR-----MAPAGGCSGFGRFGNCGNPDSFRPGSYTTGQPSDMETKPALGPTWAYVASARLFLQHHDSAALTGAGERKGRRTANLVKHSARGCHGAVEEFEVGAAGVTD 1548
            MPRL    +D A    L  L  P+++ E  + R   +L++EL VS      L+  VA +    R          DAD  D        E +G       F+SAAA YR    QGG    G   +D LL GG+   QVTEVVG + +GK+QLCM+AA   A  G  VL+IDT       R++EIA  R G   +     A L+HI ++  + +  VLAAL+G    +                                                                                           R   A+ A            RLVILDSA AVL P++GG+ N  G   +A+L   L+  A   SV VLVTN  V+DR           G  GFG                          + ALG  WA   + RL L   D  A +G       R A L KH  R C GA   F VG AGV D
Sbjct:    1 MPRLKSTSLDVAIIEKLRGLTPPILSVEGFVVRHVSQLSQELGVSEAQAYGLKRIVALQNLPARMA--------DADCQDP-------ETSGPLAI---FESAAARYRYAMRQGGLLQMGCSSIDGLLGGGLALQQVTEVVGQTGAGKTQLCMSAAAVAASSGIGVLYIDTTNGCSPRRLQEIAAARGGSAAAP----AALSHITIERCYSLANVLAALDGLATRLV------------------------------------------------------------------------------------------RTPIATAAXXXXXXXXAHAIRLVILDSAAAVLAPLLGGEGNAPGAAALATLAAALSHTALSLSVAVLVTNGAVADRAPXXXXXXXXXGSRGFGXX-------------XXXXXXXXXXKRAALGARWAAAPAVRLLL---DGGAQSG-------RVAVLDKHPLRACGGAAARFAVGGAGVVD 365          
BLAST of mRNA_P-wetherbeei_contig960.2.1 vs. uniprot
Match: A0A1Y1HKY4_KLENI (DNA repair protein RAD51 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HKY4_KLENI)

HSP 1 Score: 75.9 bits (185), Expect = 2.860e-11
Identity = 97/408 (23.77%), Postives = 140/408 (34.31%), Query Frame = 1
Query:  373 AALYRMMWDQGGFSSSGSPRVDALLLGGIMRHQVTEVVGDSASGKSQLCMTAAVCTAWG-GAHVLFIDTGRSADAVRMREIAMERFGRDL---SDNELTALLAHIRVQVAHDVYAVLAALEGFHEAVASGRTSGKMAVGPTTATAXXXXXXXXXXXXXXXXTGARAWQRSQCGGSSGGGANGESAMPSQWQTRSQAADYSGGSADXXXXXXXXXXXSYRDASASTASKEARE-DWHLGCRLVILDSATAVLGPIVGGDKNVQGHGMMASLGHTLNKIATRCSVGVLVTNNTVSDRRMAPAGGCSGFGRFGNCGNPDSFRPGSYTTGQPSDMETKPALGPTWAYVASARLFLQHHDSAALTGAGERKGRRTANLVKHSARGCHGAV---------EEFEVGAAGVTDAM 1554
            A L+  +       S+G P +D ++ GG+    +TE+VG SASGK+QLC+ AA   A    A V FIDT  S  A R+ +I     G+D       EL  +   +    A D+Y  L  L+                                                                                                + D + S    +  + D+    +L+ILDSA+A++ P++GG  + QGH +M SL   L +IA + ++ VLVTN+TVS                G  G P                  KPALG +W  V S RL L   D +            TA + KH+   C  +V           FE    G T  +
Sbjct:   68 ATLFERLTTSTTLVSTGCPSIDDVIGGGLRPGTITELVGTSASGKTQLCLQAAAAAALELRASVAFIDTSNSFSAHRLAQIVTGLHGKDKFVEHKQELRNVARRVLCFKAFDIYTALRLLDDL--------------------------------------------------------------------------------------------LVHMDGAESKRGGDGNQGDFFQKLQLLILDSASAIISPVLGG-AHTQGHALMVSLSGLLRQIALKHNIAVLVTNHTVS----------------GEGGRP------------------KPALGESWKSVPSVRLALAREDESDCC---------TATVTKHTIGACGESVPYVLSRDGLRAFEAEEPGATQQL 339          
BLAST of mRNA_P-wetherbeei_contig960.2.1 vs. uniprot
Match: A0A383VBD1_TETOB (RECA_2 domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VBD1_TETOB)

HSP 1 Score: 75.9 bits (185), Expect = 3.140e-11
Identity = 85/344 (24.71%), Postives = 126/344 (36.63%), Query Frame = 1
Query:  421 GSPRVDALLLGGIMRHQVTEVVGDSASGKSQLCMTAAVCTAWGGAHVLFIDTGRSADAVRMREIAMERFGRDLSDNELTALLAHIRVQVAHDVYAVLAALEGFHEAVASGRTSGKMAVGPTTATAXXXXXXXXXXXXXXXXTGARAWQRSQCGGSSGGGANGESAMPSQWQTRSQAADYSGGSADXXXXXXXXXXXSYRDASASTASKEAREDWHLGCRLVILDSATAVLGPIVGGDKNVQGHGMMASLGHTLNKIATRCSVGVLVTNNTVSDR------RMAPAGGCSGFGRFGNCGNPDSFRPGSYTTGQPSDMET--KPALGPTWAYVASARLFLQHHDSA 1428
            G   +DA+L+GG+    +TE+ G+S SGK+QLC+ AAV TA  G HV++ DT  +  A R R++ M  +         TA L +I V   H ++A+LA+L+                                                                                                   A AS++   AR        ++I+DS +A+L P++G  ++ QG+ ++A  G  L  IA    + VLVTN+ V         R AP     G    G  G       G+   G P D+    KPALG  W  +   RL L    +A
Sbjct:   93 GVDGLDAILMGGMRETTITELAGESCSGKTQLCLLAAVTTAHRGEHVVYFDTTNAFSAGRARQLCMANYND-------TACLGNIMVVACHSIHALLASLDELA------------------------------------------------------------------------------------------------AQASSSGPGARPS------MIIVDSISALLSPVIGSTQHHQGNVLVAETGRLLRHIADSLKLAVLVTNHVVGSSYGGYGSRAAP-----GRDSTGAAGQQGGAATGAARLG-PGDVNYNFKPALGEQWRGLPHTRLQLSRAPAA 321          
BLAST of mRNA_P-wetherbeei_contig960.2.1 vs. uniprot
Match: A0A7J7QEL3_9CHLO (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QEL3_9CHLO)

HSP 1 Score: 74.7 bits (182), Expect = 7.350e-11
Identity = 83/348 (23.85%), Postives = 131/348 (37.64%), Query Frame = 1
Query:  421 GSPRVDALLLGGIMRHQVTEVVGDSASGKSQLCMTAAVCTAWGGAHVLFIDTGRSADAVRMREIAMERFGRDLSDNELTALLAHIRVQVAHDVYAVLAALEGFHEAVASGRTSGKMAVGPTTATAXXXXXXXXXXXXXXXXTGARAWQRSQCGGSSGGGANGESAMPSQWQTRSQAADYSGGSADXXXXXXXXXXXSYRDASASTASKEAREDWHLGCRLVILDSATAVLGPIVGGDKNVQGHGMMASLGHTLNKIATRCSVGVLVTNNTVSDRRMAPAGGCSGFGRFGNCGNPDSFRPGSYT------TGQ----PSDMET--KPALGPTWAYVASARLFLQHHDSA 1428
            G   +D++L+GG+    VTE+ G+S SGK+QLC+ AAV TA  G  V++ D+  +  A R R++ M  +G         A L +I V   H ++A+LA+L+             ++AV                                                                                    AS++   +R        ++++DS +A+L P++G  ++ QGH ++A  G  L  IA    + VLVTN+ V           S +G +G+ G P     G+        TG     P D+    KPALG  W  +   RL L    +A
Sbjct:   90 GVDSLDSILMGGMRETTVTELAGESCSGKTQLCLLAAVTTAHRGERVVYFDSTNAFSAARARQLCMTNYGN-------AACLGNIMVVACHSIHALLASLD-------------ELAV-----------------------------------------------------------------------------------QASSSGPGSRPS------MIVVDSISALLSPVIGSTQHHQGHVLVAEAGRLLRHIADSLQLAVLVTNHVVG----------SSYGTYGSRGAPGRDNTGATGPQGGAGTGTARLGPGDVNYNFKPALGEQWRGLPHTRLQLSRAPAA 318          
BLAST of mRNA_P-wetherbeei_contig960.2.1 vs. uniprot
Match: A0A6H5L2A5_9PHAE (Rad51 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2A5_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 7.790e-10
Identity = 32/49 (65.31%), Postives = 40/49 (81.63%), Query Frame = 1
Query: 1072 CRLVILDSATAVLGPIVGGDKNVQGHGMMASLGHTLNKIATRCSVGVLV 1218
            CRL+ILDS TAV+ P++GG KN  GHG+MASLGH LN+ A++CS  VLV
Sbjct:  104 CRLIILDSVTAVISPLLGGFKNPAGHGLMASLGHLLNRAASQCSACVLV 152          
BLAST of mRNA_P-wetherbeei_contig960.2.1 vs. uniprot
Match: A0A388K1C7_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K1C7_CHABU)

HSP 1 Score: 72.0 bits (175), Expect = 2.060e-9
Identity = 101/408 (24.75%), Postives = 154/408 (37.75%), Query Frame = 1
Query:  364 QSAAALYRMMWDQGGFSSSGSPRVDALLLGGIMRHQVTEVVGDSASGKSQLCMTAAVCTA----WGGAHVLFIDTGRSADAVRMREIAMERFGRDL----SDNELT-ALLAHIRVQVAHDVYAVLAALEGFHEAVASGRTSGKMAVGPTTATAXXXXXXXXXXXXXXXXTGARAWQRSQCGGSSGGGANGESAMPSQWQTRSQAADYSGGSADXXXXXXXXXXXSYRDASASTASKEAREDWHLGCRLVILDSATAVLGPIVGGDKNVQGHGMMASLGHTLNKIATRCSVGVLVTNNTVSDRRMAPAGGCSGFGRFGNCGNPDSFRPGSYTTGQPSDMETKPALGPTWAYVASARLFLQHHDSAALTGAGERKGRRTANLVKHSARGCHGAVEEFEVGAAGVTDAMPP 1560
            QS     +   D   F  +G   +D LL GG+    +TE+VG S  GK+Q+C+ AA   +    WG   V+++DT  S  AVR+ ++ +   G       S  +LT AL A +R +V +D++ +LA L+   E + + R                                       +C GSS                 S   D SG S                            ED +   RL+++DS +A++ P++GG ++ QGH +M +L   L ++A    + VLVTN  VS          +G G                          KP LG +W  V  AR+ L     + +           A LVKH++  C G    F +   GVT+   P
Sbjct:  287 QSLKQQQQQQHDGPAFLPTGCTSLDDLLHGGLCNGAITELVGPSPCGKTQICLQAASVASYFCRWG---VVYVDTSNSFSAVRIAQMLVGLCGSQQKAQSSSADLTKALSAIVRFRV-YDIHKLLALLDSLDERLQTVRAG-------------------------------------ECRGSS-----------------SAQEDVSGLSD---------------------------EDVYGRLRLLVIDSVSALVSPVLGGSQS-QGHTLMVALSRRLKQLAATHGIVVLVTNYMVS---------AAGEGN-----------------------SVKPGLGESWRSVPDARIQLSSSSESDVF---------VAKLVKHTSMEC-GCETSFRIRRQGVTNVSGP 566          
BLAST of mRNA_P-wetherbeei_contig960.2.1 vs. uniprot
Match: A0A176W3R6_MARPO (RECA_2 domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176W3R6_MARPO)

HSP 1 Score: 68.9 bits (167), Expect = 4.820e-9
Identity = 100/426 (23.47%), Postives = 151/426 (35.45%), Query Frame = 1
Query:  337 GQRCSSPSFQSAAA--LYRMMWDQGGFSSS-------------GSPRVDALLLGGIMRHQVTEVVGDSASGKSQLCMTAAVCTAWG-GAHVLFIDTGRSADAVRMREIAMERFGRDLSDNE----LTALLAHIRVQVAHDVYAVLAALEGFHEAVASGRTSGKMAVGPTTATAXXXXXXXXXXXXXXXXTGARAWQRSQCGGSSGGGANGESAMPSQWQTRSQAADYSGGSADXXXXXXXXXXXSYRDASASTASKEAREDWHLGCRLVILDSATAVLGPIVGGDKNVQGHGMMASLGHTLNKIATRCSVGVLVTNNTVSDRRMAPAGGCSGFGRFGNCGNPDSFRPGSYTTGQPSDMETKPALGPTWAYVASARLFLQHHDSAALTGAGERKGRRTANLVKHSARGCHGAVEEFEVGAAGVTDAM 1554
            GQR  S  F+ A A  L  +   QGG+ +              G   +D LL GG+    +TE+VG S++GK+Q+CM AA   A+     V++IDT  +  A R+  +     G  +   E    LT  +  I+ +   D+++VLA L+  H                TT  A                                                                                         H   RL+I+DS ++V+ P++GG+ + QGH +M S+G  L K+AT   + VL+TN+TV+                G+ G P                  KPALG +W  V   RL L H  S  +          T + +KH++  C      F VG AG+   +
Sbjct:   44 GQRSESSEFKEAVAELLSYLENRQGGWCNGFELSQKEVRYLPLGCESIDNLLRGGMQEGTITELVGVSSTGKTQMCMQAAAHAAYKLRCSVIYIDTCGAFSAQRIAHMLGGMLGSLVQVEEQRDGLTLAMKSIQRRAYFDIFSVLAFLQDLH----------------TTLQACAE--------------------------------------------------------------------------------------HSSLRLLIIDSISSVISPVLGGNHS-QGHALMISVGQILKKLATTYKLAVLITNHTVA----------------GDGGQP------------------KPALGGSWKSVPHTRLMLSHDSSNDVY---------TISSLKHTSLSCTKQAA-FRVGRAGLDSVV 322          
BLAST of mRNA_P-wetherbeei_contig960.2.1 vs. uniprot
Match: A0A7S2Y0U4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0U4_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 2.290e-8
Identity = 40/116 (34.48%), Postives = 60/116 (51.72%), Query Frame = 1
Query: 1066 LGCRLVILDSATAVLGPIVGGDKNVQGHGMMASLGHTLNKIAT-RCSVGVLVTNNTVSDRRMAPAGGCSGFGRFGNCGNPDSFRPGSYTTGQPSDMETKPALGPTWAYVASARLFL 1410
            L  RLV++DS +A + P++G D++  G G++ +LG TLN++AT R  + +LV N TV+  R    GG SG                        D + K ALG +W+Y  S R+ L
Sbjct:   45 LPLRLVVVDSVSAAIAPMLGADQHFLGQGLLGTLGGTLNQLATKRSELCILVVNTTVAFSRGGGDGGASGM-----------------------DQQPKAALGRSWSYFPSTRVML 137          
BLAST of mRNA_P-wetherbeei_contig960.2.1 vs. uniprot
Match: A0A8C6QMY0_NANGA (DNA repair protein n=3 Tax=Nannospalax galili TaxID=1026970 RepID=A0A8C6QMY0_NANGA)

HSP 1 Score: 65.5 bits (158), Expect = 6.640e-8
Identity = 50/161 (31.06%), Postives = 72/161 (44.72%), Query Frame = 1
Query: 1075 RLVILDSATAVLGPIVGGDKNVQGHGMMASLGHTLNKIATRCSVGVLVTNNTVSDRRMAPAGGCSGFGRFGNCGNPDSFRPGSYTTGQPSDMETKPALGPTWAYVASARLFLQHHDSAALTGAGERKGRRTANLVKHSARGCHGAVEEFEVGAAGVTDAMP 1557
            ++VI+DS TAV+ P++GG +  +G  +M  L   L  +A    V V+VTN+   DR                                 S    KPALG +W++V S R+FL   D A  +G+G +   RTA L K S R   G  E  ++G  G  +  P
Sbjct:  201 KVVIVDSVTAVVAPLLGGQQR-EGLALMMQLARELKTLARDLGVAVVVTNHLTRDR---------------------------------SSGRLKPALGRSWSFVPSTRIFLDVTDGARASGSGSQ---RTACLTK-SPRQPTGVQEVVDIGTLGTAEQSP 323          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig960.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQZ5_ECTSI7.960e-4631.03RECA_2 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835YM23_9STRA9.340e-2928.80P-loop containing nucleoside triphosphate hydrolas... [more]
A0A1Y1HKY4_KLENI2.860e-1123.77DNA repair protein RAD51 n=1 Tax=Klebsormidium nit... [more]
A0A383VBD1_TETOB3.140e-1124.71RECA_2 domain-containing protein n=1 Tax=Tetradesm... [more]
A0A7J7QEL3_9CHLO7.350e-1123.85P-loop containing nucleoside triphosphate hydrolas... [more]
A0A6H5L2A5_9PHAE7.790e-1065.31Rad51 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A388K1C7_CHABU2.060e-924.75Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A176W3R6_MARPO4.820e-923.47RECA_2 domain-containing protein n=2 Tax=Marchanti... [more]
A0A7S2Y0U4_9STRA2.290e-834.48Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A8C6QMY0_NANGA6.640e-831.06DNA repair protein n=3 Tax=Nannospalax galili TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig960contigP-wetherbeei_contig960:1064..4137 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LQZ5
Preferred nameRAD51D
PFAMsRad51
Model size1596
Max annot lvl2759|Eukaryota
KEGG koko:K10871
KEGG Pathwayko03440,map03440
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000150,GO:0000217,GO:0000228,GO:0000280,GO:0000400,GO:0000707,GO:0000722,GO:0000723,GO:0000724,GO:0000725,GO:0000730,GO:0000781,GO:0000784,GO:0002831,GO:0002833,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003697,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005737,GO:0005813,GO:0005815,GO:0005856,GO:0006139,GO:0006259,GO:0006281,GO:0006289,GO:0006302,GO:0006310,GO:0006312,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007127,GO:0007131,GO:0008092,GO:0008094,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0010212,GO:0015630,GO:0015631,GO:0016043,GO:0016444,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022402,GO:0022414,GO:0022607,GO:0031347,GO:0031349,GO:0031974,GO:0031981,GO:0032101,GO:0032103,GO:0032200,GO:0032991,GO:0033061,GO:0033063,GO:0033554,GO:0034622,GO:0034641,GO:0035825,GO:0036297,GO:0042148,GO:0042592,GO:0042623,GO:0043015,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043900,GO:0043902,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044446,GO:0044454,GO:0044464,GO:0045003,GO:0046483,GO:0048285,GO:0048518,GO:0048583,GO:0048584,GO:0050789,GO:0050794,GO:0050896,GO:0051276,GO:0051321,GO:0051716,GO:0051726,GO:0060249,GO:0061982,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0071824,GO:0071840,GO:0080134,GO:0090304,GO:0090735,GO:0097159,GO:0098687,GO:0140013,GO:0140097,GO:1900424,GO:1900426,GO:1901360,GO:1901363,GO:1903046
Exons6
Evalue1.03e-46
EggNOG OGsCOG0468@1|root,KOG1433@2759|Eukaryota
Ec32 ortholog descriptionDNA recombination and repair protein Rad51, C-terminal
Ec32 orthologEc-07_002220.1
Descriptionrecombinase activity
Cds size1509
COG categoryL
BRITEko00000,ko00001,ko03400
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig960.2.1prot_P-wetherbeei_contig960.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig960 1127..4113 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187101.0562718-UTR-P-wetherbeei_contig960:1063..11261683187101.0562718-UTR-P-wetherbeei_contig960:1063..1126Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig960 1064..1126 +
1683187101.1527936-UTR-P-wetherbeei_contig960:4113..41371683187101.1527936-UTR-P-wetherbeei_contig960:4113..4137Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig960 4114..4137 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187101.0773876-CDS-P-wetherbeei_contig960:1126..12911683187101.0773876-CDS-P-wetherbeei_contig960:1126..1291Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig960 1127..1291 +
1683187101.0873904-CDS-P-wetherbeei_contig960:1747..19051683187101.0873904-CDS-P-wetherbeei_contig960:1747..1905Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig960 1748..1905 +
1683187101.1007195-CDS-P-wetherbeei_contig960:2049..21341683187101.1007195-CDS-P-wetherbeei_contig960:2049..2134Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig960 2050..2134 +
1683187101.1223605-CDS-P-wetherbeei_contig960:2407..25591683187101.1223605-CDS-P-wetherbeei_contig960:2407..2559Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig960 2408..2559 +
1683187101.1342807-CDS-P-wetherbeei_contig960:2934..34961683187101.1342807-CDS-P-wetherbeei_contig960:2934..3496Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig960 2935..3496 +
1683187101.1435814-CDS-P-wetherbeei_contig960:3726..41131683187101.1435814-CDS-P-wetherbeei_contig960:3726..4113Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig960 3727..4113 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig960.2.1

>prot_P-wetherbeei_contig960.2.1 ID=prot_P-wetherbeei_contig960.2.1|Name=mRNA_P-wetherbeei_contig960.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=503bp
MPRLSLLGVDEATRAALARLRAPVMTAESLLTRPPERLAEELNVSLRAVR
RLQYKVACKCQTRRSVHLSYEKSGDADSSDSAGGHSQEERNGQRCSSPSF
QSAAALYRMMWDQGGFSSSGSPRVDALLLGGIMRHQVTEVVGDSASGKSQ
LCMTAAVCTAWGGAHVLFIDTGRSADAVRMREIAMERFGRDLSDNELTAL
LAHIRVQVAHDVYAVLAALEGFHEAVASGRTSGKMAVGPTTATAAAAASA
AATAEAAAASTGARAWQRSQCGGSSGGGANGESAMPSQWQTRSQAADYSG
GSADDSPGGGGGGGGSYRDASASTASKEAREDWHLGCRLVILDSATAVLG
PIVGGDKNVQGHGMMASLGHTLNKIATRCSVGVLVTNNTVSDRRMAPAGG
CSGFGRFGNCGNPDSFRPGSYTTGQPSDMETKPALGPTWAYVASARLFLQ
HHDSAALTGAGERKGRRTANLVKHSARGCHGAVEEFEVGAAGVTDAMPPP
ER*
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mRNA from alignment at P-wetherbeei_contig960:1064..4137+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig960.2.1 ID=mRNA_P-wetherbeei_contig960.2.1|Name=mRNA_P-wetherbeei_contig960.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3074bp|location=Sequence derived from alignment at P-wetherbeei_contig960:1064..4137+ (Phaeothamnion wetherbeei SAG_119_79)
TCTGCTGCGACGGAACACTTTAGACCGGATTCAAAAATCAGACCTTGTTT TCGTTGCCTAAGGATGCCGCGCCTCTCGTTGCTCGGCGTCGACGAGGCGA CGCGAGCCGCTCTGGCTCGACTGCGTGCTCCCGTCATGACGGCCGAGTCG CTTTTGACGAGACCGCCGGAGCGCTTGGCGGAGGAGCTGAACGTGAGCTT GCGAGCCGTGCGCCGACTACAATACAAGGTTAGCCTCTACCGACGCGCTT TGAATGAGGTATAGGTCGGTAAGGGTTCCTGTTGGTGGAAAGCTCCACGT TTCGCGCCTTTTTTTGGCCCTACCTCCTTTGGTTCTCTCTTGAGCCTTCC TGCTCGTCTTTCTCCTGCAAGAGGTTTTTTTGGTGATTTAGGGATTGGAT GCGCAAACTCTCCCTTATCTGATGCTGTGTCTTTCTTGTGGTCTGGAGGG TTTTCTTTCGAAGAATCTCTGAGAGACTTCATCGTCGCTGCATGGCAACA AGCAGCTAAAGCGTACCAGCATACGGGTGAAACGAGACCCGCAAAGGGCG TGGTTCACTTCATTTCTCACTGCTCTCTTCCACAGCGCAACCAGGTCCAG CTTTAGGCTCTCCCTTTCCTGTACTTAGAAAATGTGTTTTTGATTTCCCT TGTTCGGCCTTTTCTTTCGTTTGGCAACCGTCAGGTAGCTTGCAAGTGTC AAACCCGCCGGTCTGTGCACTTGTCCTACGAGAAAAGCGGCGATGCCGAC AGCAGCGACAGTGCCGGCGGCCATAGCCAGGAGGAGCGAAATGGCCAAAG ATGCAGTTCGCCGTCGTTTCAGTCAGCAGCGGCATTGTACAGGTCGGAAG CAAATAGCTTTTTTGTCTTGGCTGTATCCGTACAGGCGTGTTGCCTGCTC TCAGATCTGGCTGATTTTAGCCCATACAATTCTTCATTACTTTCCTGGGG CTCCGGTAATTACTATGCGTTTCTCTCCCCGGCCAGGATGATGTGGGACC AGGGAGGCTTTTCGAGCTCGGGGTCGCCCCGCGTCGACGCGCTCCTTCTG GGCGGGATCATGAGGCACCAGGCACGTGCGACGGCTGCTGAGAGAAGTCA TTTGTCGGCACTCTCCGGTCCTCACACAAGATTTCTTGCCCTCTGGCGCT GTTTCGGTGTTTTAAACGCGTCACTCCTTCGCGCGGTTCCTCCGGCCAGC CGGCTGACTTGCACTCCTGACGCACCCACAACAATGACAACTATTCGCCC CGGTGAGTGTCAACTAATCTATTTGAGACGCGCTCGCCACTATTCCCTCC CCACGGATTTCATTGACTCGGCGGCGACGTTTCATTCAGCGCAGGTGACG GAGGTGGTGGGGGACTCCGCCTCGGGCAAATCGCAGCTGTGCATGACGGC GGCCGTCTGCACGGCGTGGGGCGGCGCACACGTCCTCTTCATCGACACGG GGCGGTCGGCAGACGCCGTGCGGATGCGGGAGATCGCCATGGAGAGGCGA GTGGTGAGGCCGGCAGAAGAAGTGGGAGAATGGGGAGAAAAGAGGATTGG CAGTAGGTTGGCAGGTTGTGGGGTGGTGTTTTAAGGCGCTTCTTGTGTGG GTGCTGCCACCCGTCTGCAAAGCGCGGTTTGACTCGAAACTGTGCCGCCT TGGGATGATGCAGTTGCTGCGCCGCCCGTTTGGGGATAGCGCAATCATTG AGTGTTGGTCAAAATGGGCGCTCATGCCTCGCTTGTTCCCCTTGGCGCGC ATCTTTTTCGCCCGAGCCTTTCGTTCTTCCATTCTCTCGCTCCGACAACC ATTAGATATGTCAGCTCGCCTCGTTTTCTTTTTTGTGTTTTCTTTCCGTT TTTCGCTTCCCTCCTTTGCAGGTTTGGGCGCGACCTGTCGGACAATGAGC TGACCGCCCTCCTCGCGCACATTCGTGTTCAGGTCGCCCACGACGTCTAC GCCGTCCTAGCGGCGCTCGAAGGCTTCCACGAGGCGGTGGCATCCGGCCG CACATCGGGCAAGATGGCGGTGGGCCCCACCACAGCGACGGCGGCGGCAG CGGCGTCGGCAGCAGCGACGGCAGAGGCGGCCGCGGCATCGACGGGCGCG AGAGCGTGGCAGCGGAGCCAGTGCGGTGGCAGCAGCGGCGGCGGGGCAAA CGGCGAGAGCGCGATGCCATCCCAGTGGCAGACCAGGAGCCAGGCCGCTG ATTACAGCGGAGGCTCTGCTGACGACAGCCCAGGAGGCGGTGGCGGCGGC GGCGGCAGTTACAGGGACGCCAGCGCTTCGACGGCGTCTAAAGAAGCGCG GGAAGACTGGCATCTGGGCTGCCGCCTCGTCATTCTAGACTCGGCCACGG CGGTGCTGGGGCCCATTGTGGGGGGCGACAAGAACGTGCAGGGCCACGGC ATGATGGCCTCTCTCGGCCACACGCTGAACAAGGTGGGCCGATTTTTAGT GGTTTTCGGCTCCGCCCGCCGTTTGAGAACGACAATAGTTTAGGAGGGTG AGGGCCAGTGTTCCCGATCGCCTTCGAATGCTTTTCCCGGTTTCCCCTTC TGAGCCCTTTTATCACTTCTTTGCGGCGATTACGCAGCAGGTTATGAAGA CACGCTGCCAATGCCCCGTTGCTCACCCCGACGTGAGTCTCTCCTATGTG AACTGCACCGCAGATCGCAACGCGCTGCTCAGTTGGCGTTCTTGTCACCA ACAACACTGTCTCCGACCGCAGGATGGCGCCCGCCGGCGGTTGCTCCGGT TTCGGCAGGTTTGGCAACTGTGGAAATCCAGACAGCTTTCGGCCAGGCTC CTACACAACCGGCCAACCTTCAGACATGGAGACAAAGCCGGCACTGGGGC CGACGTGGGCGTATGTGGCGTCGGCGCGGCTGTTTCTGCAGCACCACGAC TCGGCGGCACTGACAGGGGCGGGGGAGAGAAAAGGCCGCCGAACAGCGAA TCTGGTGAAGCATTCGGCCCGAGGCTGCCACGGCGCCGTTGAGGAGTTCG AGGTCGGCGCGGCGGGAGTAACAGACGCGATGCCGCCGCCGGAGCGGTAA AGATGAGCCCGTTGTTTTTAGCGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig960:1064..4137+

>mRNA_P-wetherbeei_contig960.2.1 ID=mRNA_P-wetherbeei_contig960.2.1|Name=mRNA_P-wetherbeei_contig960.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1509bp|location=Sequence derived from alignment at P-wetherbeei_contig960:1064..4137+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGCGCCTCTCGTTGCTCGGCGTCGACGAGGCGACGCGAGCCGCTCT
GGCTCGACTGCGTGCTCCCGTCATGACGGCCGAGTCGCTTTTGACGAGAC
CGCCGGAGCGCTTGGCGGAGGAGCTGAACGTGAGCTTGCGAGCCGTGCGC
CGACTACAATACAAGGTAGCTTGCAAGTGTCAAACCCGCCGGTCTGTGCA
CTTGTCCTACGAGAAAAGCGGCGATGCCGACAGCAGCGACAGTGCCGGCG
GCCATAGCCAGGAGGAGCGAAATGGCCAAAGATGCAGTTCGCCGTCGTTT
CAGTCAGCAGCGGCATTGTACAGGATGATGTGGGACCAGGGAGGCTTTTC
GAGCTCGGGGTCGCCCCGCGTCGACGCGCTCCTTCTGGGCGGGATCATGA
GGCACCAGGTGACGGAGGTGGTGGGGGACTCCGCCTCGGGCAAATCGCAG
CTGTGCATGACGGCGGCCGTCTGCACGGCGTGGGGCGGCGCACACGTCCT
CTTCATCGACACGGGGCGGTCGGCAGACGCCGTGCGGATGCGGGAGATCG
CCATGGAGAGGTTTGGGCGCGACCTGTCGGACAATGAGCTGACCGCCCTC
CTCGCGCACATTCGTGTTCAGGTCGCCCACGACGTCTACGCCGTCCTAGC
GGCGCTCGAAGGCTTCCACGAGGCGGTGGCATCCGGCCGCACATCGGGCA
AGATGGCGGTGGGCCCCACCACAGCGACGGCGGCGGCAGCGGCGTCGGCA
GCAGCGACGGCAGAGGCGGCCGCGGCATCGACGGGCGCGAGAGCGTGGCA
GCGGAGCCAGTGCGGTGGCAGCAGCGGCGGCGGGGCAAACGGCGAGAGCG
CGATGCCATCCCAGTGGCAGACCAGGAGCCAGGCCGCTGATTACAGCGGA
GGCTCTGCTGACGACAGCCCAGGAGGCGGTGGCGGCGGCGGCGGCAGTTA
CAGGGACGCCAGCGCTTCGACGGCGTCTAAAGAAGCGCGGGAAGACTGGC
ATCTGGGCTGCCGCCTCGTCATTCTAGACTCGGCCACGGCGGTGCTGGGG
CCCATTGTGGGGGGCGACAAGAACGTGCAGGGCCACGGCATGATGGCCTC
TCTCGGCCACACGCTGAACAAGATCGCAACGCGCTGCTCAGTTGGCGTTC
TTGTCACCAACAACACTGTCTCCGACCGCAGGATGGCGCCCGCCGGCGGT
TGCTCCGGTTTCGGCAGGTTTGGCAACTGTGGAAATCCAGACAGCTTTCG
GCCAGGCTCCTACACAACCGGCCAACCTTCAGACATGGAGACAAAGCCGG
CACTGGGGCCGACGTGGGCGTATGTGGCGTCGGCGCGGCTGTTTCTGCAG
CACCACGACTCGGCGGCACTGACAGGGGCGGGGGAGAGAAAAGGCCGCCG
AACAGCGAATCTGGTGAAGCATTCGGCCCGAGGCTGCCACGGCGCCGTTG
AGGAGTTCGAGGTCGGCGCGGCGGGAGTAACAGACGCGATGCCGCCGCCG
GAGCGGTAA
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