mRNA_P-wetherbeei_contig960.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig960.2.1 vs. uniprot
Match: D8LQZ5_ECTSI (RECA_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQZ5_ECTSI) HSP 1 Score: 175 bits (444), Expect = 7.960e-46 Identity = 166/535 (31.03%), Postives = 227/535 (42.43%), Query Frame = 1 Query: 64 MPRLSLLGVDEATRAALARLRAPVMTAESLLTRPPERLAEELNVSLRAVRRLQYKVACKCQTRRSV--HLSYEKSGDADSSDSAGGHSQEERNGQRCS-------------------SP----------------------SFQSAAALYRMMWDQGGFSSSGSPRVDALLLGGIMRHQVTEVVGDSASGKSQLCMTAAVCTAWGGAHVLFIDTGRSADAVRMREIAMERFGR---DLSDNELTALLAHIRVQVAHDVYAVLAALEGFHEAVASGRTSGKMAVGPTTATAXXXXXXXXXXXXXXXXTGARAWQRSQCGGSSGGGANGESAMPSQWQTRSQAADYSGGSADXXXXXXXXXXXSYRDASASTASKEAREDWHLGCRLVILDSATAVLGPIVGGDKNVQGHGMMASLGHTLNKIATRCSVGVLVTNNTVSDRRMAPAGGCSGFGRFGNCGNPDSFRPGSYTTGQPSDMETKPALGPTWAYVASARLFLQHHDSAA--LTGAGERKGR----------RTANLVKHSAR 1494 MPRL +G+DE T LA L P++ AESLL+R PE+LA E VS++AV +L+Y VA +CQ + V + E +GD ++ + GH E + G S SP SF+SA ALYR D GGF ++GS +D LL G+M H V EVVG S+SGK+QLC+TAAV A G VL+IDT RM++IA R+ +++ ++ ALL +RV A D+ V++AL + + V G +G Y D CRLVILDS TAV+ P++GG KN GHG+MASLGH LN+ A++CS VLV N+TV+ R ++ G + ALG TW V S R+ L +AA +G+G+ G RTA L+KH A+ Sbjct: 1 MPRLDRMGLDERTLGVLASLPVPIVLAESLLSRDPEQLALECGVSMKAVSKLRYLVALRCQPQPPVPDRRAPEDNGDG-ATPNTQGHGGEGKRGAGSSTXXXXXXXXXXXXXXXXXXSPRRIGXXXXXXXXXXXXXXPPLLSFESADALYRQARDVGGFVTTGSDSLDNLLCKGLMLHHVVEVVGRSSSGKTQLCLTAAVAAASHGIGVLYIDTANGCSVRRMQQIARSRYADANGEMTARQMDALLDRLRVVRAFDISRVMSALVAYIDGVMEGGRNGV----------------------------------------------------------------------------------YSD-----------------CRLVILDSVTAVISPLLGGFKNPAGHGLMASLGHLLNRAASQCSACVLVANSTVAPRGISEEEG------------------------------PRAALGLTWEGVPSIRVLLAEASAAAGGASGSGDAGGADHGTVGEASPRTATLLKHPAQ 405
BLAST of mRNA_P-wetherbeei_contig960.2.1 vs. uniprot
Match: A0A835YM23_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM23_9STRA) HSP 1 Score: 127 bits (320), Expect = 9.340e-29 Identity = 144/500 (28.80%), Postives = 184/500 (36.80%), Query Frame = 1 Query: 64 MPRLSLLGVDEATRAALARLRAPVMTAESLLTRPPERLAEELNVSLRAVRRLQYKVACKCQTRRSVHLSYEKSGDADSSDSAGGHSQEERNGQRCSSPSFQSAAALYRMMWDQGGFSSSGSPRVDALLLGGIMRHQVTEVVGDSASGKSQLCMTAAVCTAWGGAHVLFIDTGRSADAVRMREIAMERFGRDLSDNELTALLAHIRVQVAHDVYAVLAALEGFHEAVASGRTSGKMAVGPTTATAXXXXXXXXXXXXXXXXTGARAWQRSQCGGSSGGGANGESAMPSQWQTRSQAADYSGGSADXXXXXXXXXXXSYRDASASTASKEAREDWHLGCRLVILDSATAVLGPIVGGDKNVQGHGMMASLGHTLNKIATRCSVGVLVTNNTVSDRR-----MAPAGGCSGFGRFGNCGNPDSFRPGSYTTGQPSDMETKPALGPTWAYVASARLFLQHHDSAALTGAGERKGRRTANLVKHSARGCHGAVEEFEVGAAGVTD 1548 MPRL +D A L L P+++ E + R +L++EL VS L+ VA + R DAD D E +G F+SAAA YR QGG G +D LL GG+ QVTEVVG + +GK+QLCM+AA A G VL+IDT R++EIA R G + A L+HI ++ + + VLAAL+G + R A+ A RLVILDSA AVL P++GG+ N G +A+L L+ A SV VLVTN V+DR G GFG + ALG WA + RL L D A +G R A L KH R C GA F VG AGV D Sbjct: 1 MPRLKSTSLDVAIIEKLRGLTPPILSVEGFVVRHVSQLSQELGVSEAQAYGLKRIVALQNLPARMA--------DADCQDP-------ETSGPLAI---FESAAARYRYAMRQGGLLQMGCSSIDGLLGGGLALQQVTEVVGQTGAGKTQLCMSAAAVAASSGIGVLYIDTTNGCSPRRLQEIAAARGGSAAAP----AALSHITIERCYSLANVLAALDGLATRLV------------------------------------------------------------------------------------------RTPIATAAXXXXXXXXAHAIRLVILDSAAAVLAPLLGGEGNAPGAAALATLAAALSHTALSLSVAVLVTNGAVADRAPXXXXXXXXXGSRGFGXX-------------XXXXXXXXXXKRAALGARWAAAPAVRLLL---DGGAQSG-------RVAVLDKHPLRACGGAAARFAVGGAGVVD 365
BLAST of mRNA_P-wetherbeei_contig960.2.1 vs. uniprot
Match: A0A1Y1HKY4_KLENI (DNA repair protein RAD51 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HKY4_KLENI) HSP 1 Score: 75.9 bits (185), Expect = 2.860e-11 Identity = 97/408 (23.77%), Postives = 140/408 (34.31%), Query Frame = 1 Query: 373 AALYRMMWDQGGFSSSGSPRVDALLLGGIMRHQVTEVVGDSASGKSQLCMTAAVCTAWG-GAHVLFIDTGRSADAVRMREIAMERFGRDL---SDNELTALLAHIRVQVAHDVYAVLAALEGFHEAVASGRTSGKMAVGPTTATAXXXXXXXXXXXXXXXXTGARAWQRSQCGGSSGGGANGESAMPSQWQTRSQAADYSGGSADXXXXXXXXXXXSYRDASASTASKEARE-DWHLGCRLVILDSATAVLGPIVGGDKNVQGHGMMASLGHTLNKIATRCSVGVLVTNNTVSDRRMAPAGGCSGFGRFGNCGNPDSFRPGSYTTGQPSDMETKPALGPTWAYVASARLFLQHHDSAALTGAGERKGRRTANLVKHSARGCHGAV---------EEFEVGAAGVTDAM 1554 A L+ + S+G P +D ++ GG+ +TE+VG SASGK+QLC+ AA A A V FIDT S A R+ +I G+D EL + + A D+Y L L+ + D + S + + D+ +L+ILDSA+A++ P++GG + QGH +M SL L +IA + ++ VLVTN+TVS G G P KPALG +W V S RL L D + TA + KH+ C +V FE G T + Sbjct: 68 ATLFERLTTSTTLVSTGCPSIDDVIGGGLRPGTITELVGTSASGKTQLCLQAAAAAALELRASVAFIDTSNSFSAHRLAQIVTGLHGKDKFVEHKQELRNVARRVLCFKAFDIYTALRLLDDL--------------------------------------------------------------------------------------------LVHMDGAESKRGGDGNQGDFFQKLQLLILDSASAIISPVLGG-AHTQGHALMVSLSGLLRQIALKHNIAVLVTNHTVS----------------GEGGRP------------------KPALGESWKSVPSVRLALAREDESDCC---------TATVTKHTIGACGESVPYVLSRDGLRAFEAEEPGATQQL 339
BLAST of mRNA_P-wetherbeei_contig960.2.1 vs. uniprot
Match: A0A383VBD1_TETOB (RECA_2 domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VBD1_TETOB) HSP 1 Score: 75.9 bits (185), Expect = 3.140e-11 Identity = 85/344 (24.71%), Postives = 126/344 (36.63%), Query Frame = 1 Query: 421 GSPRVDALLLGGIMRHQVTEVVGDSASGKSQLCMTAAVCTAWGGAHVLFIDTGRSADAVRMREIAMERFGRDLSDNELTALLAHIRVQVAHDVYAVLAALEGFHEAVASGRTSGKMAVGPTTATAXXXXXXXXXXXXXXXXTGARAWQRSQCGGSSGGGANGESAMPSQWQTRSQAADYSGGSADXXXXXXXXXXXSYRDASASTASKEAREDWHLGCRLVILDSATAVLGPIVGGDKNVQGHGMMASLGHTLNKIATRCSVGVLVTNNTVSDR------RMAPAGGCSGFGRFGNCGNPDSFRPGSYTTGQPSDMET--KPALGPTWAYVASARLFLQHHDSA 1428 G +DA+L+GG+ +TE+ G+S SGK+QLC+ AAV TA G HV++ DT + A R R++ M + TA L +I V H ++A+LA+L+ A AS++ AR ++I+DS +A+L P++G ++ QG+ ++A G L IA + VLVTN+ V R AP G G G G+ G P D+ KPALG W + RL L +A Sbjct: 93 GVDGLDAILMGGMRETTITELAGESCSGKTQLCLLAAVTTAHRGEHVVYFDTTNAFSAGRARQLCMANYND-------TACLGNIMVVACHSIHALLASLDELA------------------------------------------------------------------------------------------------AQASSSGPGARPS------MIIVDSISALLSPVIGSTQHHQGNVLVAETGRLLRHIADSLKLAVLVTNHVVGSSYGGYGSRAAP-----GRDSTGAAGQQGGAATGAARLG-PGDVNYNFKPALGEQWRGLPHTRLQLSRAPAA 321
BLAST of mRNA_P-wetherbeei_contig960.2.1 vs. uniprot
Match: A0A7J7QEL3_9CHLO (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QEL3_9CHLO) HSP 1 Score: 74.7 bits (182), Expect = 7.350e-11 Identity = 83/348 (23.85%), Postives = 131/348 (37.64%), Query Frame = 1 Query: 421 GSPRVDALLLGGIMRHQVTEVVGDSASGKSQLCMTAAVCTAWGGAHVLFIDTGRSADAVRMREIAMERFGRDLSDNELTALLAHIRVQVAHDVYAVLAALEGFHEAVASGRTSGKMAVGPTTATAXXXXXXXXXXXXXXXXTGARAWQRSQCGGSSGGGANGESAMPSQWQTRSQAADYSGGSADXXXXXXXXXXXSYRDASASTASKEAREDWHLGCRLVILDSATAVLGPIVGGDKNVQGHGMMASLGHTLNKIATRCSVGVLVTNNTVSDRRMAPAGGCSGFGRFGNCGNPDSFRPGSYT------TGQ----PSDMET--KPALGPTWAYVASARLFLQHHDSA 1428 G +D++L+GG+ VTE+ G+S SGK+QLC+ AAV TA G V++ D+ + A R R++ M +G A L +I V H ++A+LA+L+ ++AV AS++ +R ++++DS +A+L P++G ++ QGH ++A G L IA + VLVTN+ V S +G +G+ G P G+ TG P D+ KPALG W + RL L +A Sbjct: 90 GVDSLDSILMGGMRETTVTELAGESCSGKTQLCLLAAVTTAHRGERVVYFDSTNAFSAARARQLCMTNYGN-------AACLGNIMVVACHSIHALLASLD-------------ELAV-----------------------------------------------------------------------------------QASSSGPGSRPS------MIVVDSISALLSPVIGSTQHHQGHVLVAEAGRLLRHIADSLQLAVLVTNHVVG----------SSYGTYGSRGAPGRDNTGATGPQGGAGTGTARLGPGDVNYNFKPALGEQWRGLPHTRLQLSRAPAA 318
BLAST of mRNA_P-wetherbeei_contig960.2.1 vs. uniprot
Match: A0A6H5L2A5_9PHAE (Rad51 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2A5_9PHAE) HSP 1 Score: 68.2 bits (165), Expect = 7.790e-10 Identity = 32/49 (65.31%), Postives = 40/49 (81.63%), Query Frame = 1 Query: 1072 CRLVILDSATAVLGPIVGGDKNVQGHGMMASLGHTLNKIATRCSVGVLV 1218 CRL+ILDS TAV+ P++GG KN GHG+MASLGH LN+ A++CS VLV Sbjct: 104 CRLIILDSVTAVISPLLGGFKNPAGHGLMASLGHLLNRAASQCSACVLV 152
BLAST of mRNA_P-wetherbeei_contig960.2.1 vs. uniprot
Match: A0A388K1C7_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K1C7_CHABU) HSP 1 Score: 72.0 bits (175), Expect = 2.060e-9 Identity = 101/408 (24.75%), Postives = 154/408 (37.75%), Query Frame = 1 Query: 364 QSAAALYRMMWDQGGFSSSGSPRVDALLLGGIMRHQVTEVVGDSASGKSQLCMTAAVCTA----WGGAHVLFIDTGRSADAVRMREIAMERFGRDL----SDNELT-ALLAHIRVQVAHDVYAVLAALEGFHEAVASGRTSGKMAVGPTTATAXXXXXXXXXXXXXXXXTGARAWQRSQCGGSSGGGANGESAMPSQWQTRSQAADYSGGSADXXXXXXXXXXXSYRDASASTASKEAREDWHLGCRLVILDSATAVLGPIVGGDKNVQGHGMMASLGHTLNKIATRCSVGVLVTNNTVSDRRMAPAGGCSGFGRFGNCGNPDSFRPGSYTTGQPSDMETKPALGPTWAYVASARLFLQHHDSAALTGAGERKGRRTANLVKHSARGCHGAVEEFEVGAAGVTDAMPP 1560 QS + D F +G +D LL GG+ +TE+VG S GK+Q+C+ AA + WG V+++DT S AVR+ ++ + G S +LT AL A +R +V +D++ +LA L+ E + + R +C GSS S D SG S ED + RL+++DS +A++ P++GG ++ QGH +M +L L ++A + VLVTN VS +G G KP LG +W V AR+ L + + A LVKH++ C G F + GVT+ P Sbjct: 287 QSLKQQQQQQHDGPAFLPTGCTSLDDLLHGGLCNGAITELVGPSPCGKTQICLQAASVASYFCRWG---VVYVDTSNSFSAVRIAQMLVGLCGSQQKAQSSSADLTKALSAIVRFRV-YDIHKLLALLDSLDERLQTVRAG-------------------------------------ECRGSS-----------------SAQEDVSGLSD---------------------------EDVYGRLRLLVIDSVSALVSPVLGGSQS-QGHTLMVALSRRLKQLAATHGIVVLVTNYMVS---------AAGEGN-----------------------SVKPGLGESWRSVPDARIQLSSSSESDVF---------VAKLVKHTSMEC-GCETSFRIRRQGVTNVSGP 566
BLAST of mRNA_P-wetherbeei_contig960.2.1 vs. uniprot
Match: A0A176W3R6_MARPO (RECA_2 domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176W3R6_MARPO) HSP 1 Score: 68.9 bits (167), Expect = 4.820e-9 Identity = 100/426 (23.47%), Postives = 151/426 (35.45%), Query Frame = 1 Query: 337 GQRCSSPSFQSAAA--LYRMMWDQGGFSSS-------------GSPRVDALLLGGIMRHQVTEVVGDSASGKSQLCMTAAVCTAWG-GAHVLFIDTGRSADAVRMREIAMERFGRDLSDNE----LTALLAHIRVQVAHDVYAVLAALEGFHEAVASGRTSGKMAVGPTTATAXXXXXXXXXXXXXXXXTGARAWQRSQCGGSSGGGANGESAMPSQWQTRSQAADYSGGSADXXXXXXXXXXXSYRDASASTASKEAREDWHLGCRLVILDSATAVLGPIVGGDKNVQGHGMMASLGHTLNKIATRCSVGVLVTNNTVSDRRMAPAGGCSGFGRFGNCGNPDSFRPGSYTTGQPSDMETKPALGPTWAYVASARLFLQHHDSAALTGAGERKGRRTANLVKHSARGCHGAVEEFEVGAAGVTDAM 1554 GQR S F+ A A L + QGG+ + G +D LL GG+ +TE+VG S++GK+Q+CM AA A+ V++IDT + A R+ + G + E LT + I+ + D+++VLA L+ H TT A H RL+I+DS ++V+ P++GG+ + QGH +M S+G L K+AT + VL+TN+TV+ G+ G P KPALG +W V RL L H S + T + +KH++ C F VG AG+ + Sbjct: 44 GQRSESSEFKEAVAELLSYLENRQGGWCNGFELSQKEVRYLPLGCESIDNLLRGGMQEGTITELVGVSSTGKTQMCMQAAAHAAYKLRCSVIYIDTCGAFSAQRIAHMLGGMLGSLVQVEEQRDGLTLAMKSIQRRAYFDIFSVLAFLQDLH----------------TTLQACAE--------------------------------------------------------------------------------------HSSLRLLIIDSISSVISPVLGGNHS-QGHALMISVGQILKKLATTYKLAVLITNHTVA----------------GDGGQP------------------KPALGGSWKSVPHTRLMLSHDSSNDVY---------TISSLKHTSLSCTKQAA-FRVGRAGLDSVV 322
BLAST of mRNA_P-wetherbeei_contig960.2.1 vs. uniprot
Match: A0A7S2Y0U4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0U4_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 2.290e-8 Identity = 40/116 (34.48%), Postives = 60/116 (51.72%), Query Frame = 1 Query: 1066 LGCRLVILDSATAVLGPIVGGDKNVQGHGMMASLGHTLNKIAT-RCSVGVLVTNNTVSDRRMAPAGGCSGFGRFGNCGNPDSFRPGSYTTGQPSDMETKPALGPTWAYVASARLFL 1410 L RLV++DS +A + P++G D++ G G++ +LG TLN++AT R + +LV N TV+ R GG SG D + K ALG +W+Y S R+ L Sbjct: 45 LPLRLVVVDSVSAAIAPMLGADQHFLGQGLLGTLGGTLNQLATKRSELCILVVNTTVAFSRGGGDGGASGM-----------------------DQQPKAALGRSWSYFPSTRVML 137
BLAST of mRNA_P-wetherbeei_contig960.2.1 vs. uniprot
Match: A0A8C6QMY0_NANGA (DNA repair protein n=3 Tax=Nannospalax galili TaxID=1026970 RepID=A0A8C6QMY0_NANGA) HSP 1 Score: 65.5 bits (158), Expect = 6.640e-8 Identity = 50/161 (31.06%), Postives = 72/161 (44.72%), Query Frame = 1 Query: 1075 RLVILDSATAVLGPIVGGDKNVQGHGMMASLGHTLNKIATRCSVGVLVTNNTVSDRRMAPAGGCSGFGRFGNCGNPDSFRPGSYTTGQPSDMETKPALGPTWAYVASARLFLQHHDSAALTGAGERKGRRTANLVKHSARGCHGAVEEFEVGAAGVTDAMP 1557 ++VI+DS TAV+ P++GG + +G +M L L +A V V+VTN+ DR S KPALG +W++V S R+FL D A +G+G + RTA L K S R G E ++G G + P Sbjct: 201 KVVIVDSVTAVVAPLLGGQQR-EGLALMMQLARELKTLARDLGVAVVVTNHLTRDR---------------------------------SSGRLKPALGRSWSFVPSTRIFLDVTDGARASGSGSQ---RTACLTK-SPRQPTGVQEVVDIGTLGTAEQSP 323 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig960.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig960.2.1 >prot_P-wetherbeei_contig960.2.1 ID=prot_P-wetherbeei_contig960.2.1|Name=mRNA_P-wetherbeei_contig960.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=503bp MPRLSLLGVDEATRAALARLRAPVMTAESLLTRPPERLAEELNVSLRAVRback to top mRNA from alignment at P-wetherbeei_contig960:1064..4137+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig960.2.1 ID=mRNA_P-wetherbeei_contig960.2.1|Name=mRNA_P-wetherbeei_contig960.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3074bp|location=Sequence derived from alignment at P-wetherbeei_contig960:1064..4137+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig960:1064..4137+ >mRNA_P-wetherbeei_contig960.2.1 ID=mRNA_P-wetherbeei_contig960.2.1|Name=mRNA_P-wetherbeei_contig960.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1509bp|location=Sequence derived from alignment at P-wetherbeei_contig960:1064..4137+ (Phaeothamnion wetherbeei SAG_119_79)back to top |