mRNA_P-wetherbeei_contig9597.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig9597.1.1
Unique NamemRNA_P-wetherbeei_contig9597.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig9597.1.1 vs. uniprot
Match: A0A7S2RY90_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RY90_9STRA)

HSP 1 Score: 203 bits (517), Expect = 5.640e-61
Identity = 121/276 (43.84%), Postives = 158/276 (57.25%), Query Frame = 1
Query:   13 AGAVSGFVQVLVEYPIDTLKTRV-SAQFLDHNKGSHEWRTPRHVLVGTLRNEGVTALWQGASSRFATLSLIKASQFSLYQRFLNATGGQPAMSGFLTGIVNTYCTVPVDVIKCRLQVYRRNTVPAAGGAGVGGPXXPTAPSS-RPSVVRLVAGLLRNHGVAAFYAGWAAHAARDAVGYAALFTAFTSLRQRTDLPMPVCGAAAGVCFYLVALPADRVKVLMQTQDLAHPRRFAGAVACWRHVWRTEGLRGAYLGCTPALLKTVVGQGAALFAYEAV 834
            AG  SG  QV  EYP DTLK R+ S QF         +R+  H L   L  EG  AL+QG   R AT  L+K+S FSL++   +ATG    + G + G +N   + P+DV+K R+Q + R +  AA  A  G      A +    + +     L  NHG+   Y G AAHA RDA+GYA L++ F SL+  TDLP P+CG  +G+ FYL  LP DRVK +MQTQDL  P  +   + C R V RTEG+ G Y+GC+P L KT VGQG AL  Y+A+
Sbjct:    1 AGLASGTCQVAAEYPWDTLKVRLQSKQF--------HYRSAFHCLREVLGKEGPAALYQGVLPRLATYGLVKSSLFSLFEAASSATGSV-FLGGGVAGALNVAISCPIDVLKSRMQCHVRGSSRAAAAAAEGARVVRGAGAGGSTNAITAAVDLFANHGLRGLYWGVAAHACRDALGYAILYSVFQSLKDNTDLPKPLCGGLSGMAFYLSTLPIDRVKTIMQTQDLHRPI-YTDPLLCLRDVLRTEGVLGLYVGCSPTLAKTFVGQGVALVVYDAL 266          
BLAST of mRNA_P-wetherbeei_contig9597.1.1 vs. uniprot
Match: A0A8J6C1E7_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C1E7_DIALT)

HSP 1 Score: 141 bits (356), Expect = 8.530e-37
Identity = 96/276 (34.78%), Postives = 138/276 (50.00%), Query Frame = 1
Query:    4 ATIAGAVSGFVQVLVEYPIDTLKTRVSAQFLDHNKGSHEWRTPRHVLVGTLRNEGVTALWQGASSRFATLSLIKASQFSLYQRFLNATGGQ--PAMSGFLTGIVNTYCTVPVDVIKCRLQVYRRNTVPAAGGAGVGGPXXPTAPSSRPSVVRLVAGLLRNHGVAAFYAGWAAHAARDAVGYAALFTAFTSLRQRTDLPMPVCGAAAGVCFYLVALPADRVKVLMQTQDLAHPRRFAGAVACWRHVWRTEGLRGAYLGCTPALLKTVVGQGAALFAY 825
            A +AG ++G  QV+ E+P+DTLK R+       +  +H+      VL  T+  EG +AL++G   R  T   +K S F++Y+       G+  PA++G L G++N   +   +V+K + QV   + V    G+GV             +  R    ++   G    +AG      RD VGY ALF  +   R    +PMPV G  AG  FY+VALPADRV+ ++ TQ LA PR F  A+   R V    GL G Y G  P L +T +GQ  AL  Y
Sbjct:   12 AAVAGVLAGVAQVVAEHPLDTLKARMQT-LARPDLRAHDGSLS--VLRATVAREGGSALFRGIVPRLLTYGAVKGSLFNIYEALRRTPVGERSPALAGALAGLLNCPLSCAPEVVKSQCQVGSHDGV----GSGV-------------AFARATMRIVSLRGPRGLFAGLLPLCVRDCVGYCALFCVYEQRRALPHVPMPVLGGLAGCAFYVVALPADRVRTVLMTQSLAEPR-FRTAMDAARAVLAQAGLLGFYRGLAPTLARTFMGQAVALTVY 266          
BLAST of mRNA_P-wetherbeei_contig9597.1.1 vs. uniprot
Match: A0A7S1IF04_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IF04_9EUGL)

HSP 1 Score: 132 bits (332), Expect = 1.010e-34
Identity = 77/171 (45.03%), Postives = 99/171 (57.89%), Query Frame = 1
Query:   13 AGAVSGFVQVLVEYPIDTLKTRVSAQFLDHNKGSHEWRTPRHVLVGTLRNEGVTALWQGASSRFATLSLIKASQFSLYQRFLNATGG---QPAMSGFLTGIVNTYCTVPVDVIKCRLQVYRRNTVPAAGGAGVGGPXXPTAPSSRPSVVRLVAGLLRNHGVAAFYAGWAAH 516
            AGA+SG  QV  EYP+DT+K R+ AQ   H      W   R  L  T++ EG++ALWQGASSRF+T +L+KASQF+LY  F     G   + A++G  TG+ NT+ TVP+DVIK RLQV++                 P +  S    VRLV  LLR HG    Y+GW AH
Sbjct:    6 AGALSGLAQVAAEYPLDTVKVRLQAQVRQHQF----WNGWRDCLAKTVQQEGLSALWQGASSRFSTYALVKASQFALYDYFSRQLSGLRAEKALAGAATGLCNTWITVPMDVIKSRLQVFQ-----------------PLSNLSYQGPVRLVGQLLREHGGRVLYSGWTAH 155          
BLAST of mRNA_P-wetherbeei_contig9597.1.1 vs. uniprot
Match: A0A1S4ARF6_TOBAC (mitochondrial arginine transporter BAC2 n=4 Tax=Nicotiana TaxID=4085 RepID=A0A1S4ARF6_TOBAC)

HSP 1 Score: 94.0 bits (232), Expect = 1.410e-18
Identity = 78/295 (26.44%), Postives = 123/295 (41.69%), Query Frame = 1
Query:   10 IAGAVSGFVQVLVEYPIDTLKTRVSAQFLDHNKGSHEWRTPRHVLVGTLRNEGVTALWQGASSRFATLSLIKASQFSLYQRFL-----NATGGQP------AMSGFLTGIVNTYCTVPVDVIKCRLQVYRRNTVPAAGGAGVGGPXXPTAPSSRPSVVRLVAGLLRNHGVAAFYAGWAAHAARDAVGYAALFTAFTSLR-----------QRTDLPMPVCGAAAGVCFYLVALPADRVKVLMQTQDLAHPRRFAGAVACWRHVWRTEGLRGAYLGCTPALLKTVVGQGAALFAYE 828
            +AG   G   ++  YP+DT++ R   Q     KGS  +R  RHV V     EG  +L++G ++  A+++   A  F +Y         N     P      A+ GF TG + +    PV+++K RLQ+ RRN+           P      +S      +   + +  G    Y G      RDA  +   F  +  +R           Q +   M + G  AGV  ++   P D +K  +Q Q  + P R++G V C+R   + EG    + G   A+ +  V  GA   AYE
Sbjct:   17 VAGGFGGIAGIVSGYPLDTVRVR---QQNSTQKGS-AFRILRHVAV----TEGPLSLYRGMAAPLASVTFQNAMVFQIYAVLSRAFDRNVPASDPPSYKGVALGGFGTGAIQSLMLTPVELVKIRLQLQRRNS-----------PDNKNQITSYKGPTDVARSIFKQEGWKGIYRGLTITVLRDAPAHGLYFWTYEYVREQLHPGCRKNGQESFRTMLIAGGLAGVASWISCYPVDVIKTRLQAQSQSTPSRYSGIVDCFRRSVKQEGYSVLWRGLGTAVARAFVVNGAIFTAYE 292          
BLAST of mRNA_P-wetherbeei_contig9597.1.1 vs. uniprot
Match: A0A1Y2GAS2_9FUNG (Mitochondrial carrier domain-containing protein n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GAS2_9FUNG)

HSP 1 Score: 91.3 bits (225), Expect = 1.600e-17
Identity = 78/300 (26.00%), Postives = 132/300 (44.00%), Query Frame = 1
Query:   10 IAGAVSGFVQVLVEYPIDTLKTRVSAQFLDHNKGSHEWRTPRHVLVGTLRNEGVTALWQGASSR---FATLSLIKASQFSLYQRFLNATGGQP---------AMSGFLTGIVNTYCTVPVDVIKCRLQVYRRNTVPAAGGAGVGGPXXPTAPSSRPSVVRLVAGLLRNHGVAAFYAGWAAHAARDAVGYAALFTAFTS--------LRQRTDLPMPV----CGAAAGVCFYLVALPADRVKVLMQTQ-DLAHPRRFAGAVACWRHVWRTEGLRGAYLGCTPALLKTVVGQGAALFAYEAV 834
            IAG  SG  +++V +P DT+K R+         G+++++ P   L  T++ EG  AL++GA+     +A +  +     S Y+  L   GG P          ++G   G+  ++   P++ +K RLQV          G                  +     L++N+GV   + G  A      + + + F  + S         R+RT++         G      F++ A P D VK  + TQ D+ +P  F   V+C++HV++TEGLRG Y G  P LL+       AL ++E +
Sbjct:   52 IAGVFSGITKLIVGHPFDTIKVRMQTS------GANQFQGPLQCLTETIKKEGPRALYKGATPPLIGWAFMDSLMLGSLSYYKLMLQ--GGDPNVKLTPFYNGLAGIGAGVTVSFLAAPIEHVKARLQVQYDAKTKLYNGP-----------------IDCARQLIKNNGVTGLWKGLVA-----TLWFRSWFFMWWSSYEIFAAEFRKRTNMSEAAINFWAGGLGANTFWVFAFPCDVVKNKIMTQPDVKNPP-FPTIVSCFKHVYKTEGLRGFYRGFVPCLLRAFPTNACALTSFELI 320          
BLAST of mRNA_P-wetherbeei_contig9597.1.1 vs. uniprot
Match: A0A6A6VDE5_9PLEO (Mitochondrial carnitine/acylcarnitine carrier protein n=1 Tax=Sporormia fimetaria CBS 119925 TaxID=1340428 RepID=A0A6A6VDE5_9PLEO)

HSP 1 Score: 88.2 bits (217), Expect = 1.810e-16
Identity = 85/306 (27.78%), Postives = 126/306 (41.18%), Query Frame = 1
Query:   10 IAGAVSGFVQVLVEYPIDTLKTRVSAQFLDHNKGSHEWRTPRHVLVGTLRNEGVTALWQGASSRFAT---LSLIKASQFSLYQRFLNATGGQP-----------------AMSGFLTGIVNTYCTVPVDVIKCRLQVYRRNTVPAAGGAG--VGGPXXPTAPSSRPSVVRLVAGLLRNHGVAAFYAGWAAHAARDAV-----GYAALFTAFTSLRQRTDLPMPV----CGAAAGVCFYLVALPADRVKVLMQTQDLAHPRRFAGAVACWRHVWRTEGLRGAYLGCTPALLKTVVGQGAALFAYEAV 834
            + G  SG  ++ V +P DT+K R+  Q  DH++    W      L+ TLRNEGV A+++GAS        +  +     S+Y+R LN     P                 AM+G + G   ++   PV+ IK RLQV       AA  A     GP            +  +  +  NHGV   Y G A+            G   +FT   + ++ T+L  P      G  +   F+L + P+D VK  + T  L   R++       + VWR  G RG + G  P  L+       AL A+E V
Sbjct:   33 VGGVFSGIAKLTVGHPFDTIKVRL--QTTDHSRFKGPW----DCLLQTLRNEGVRAIYKGASPPLVGWMFMDSVMLGSLSVYRRLLNENVFNPSTTYSSQERGKLPFIGHAMAGTMAGWTVSFVAAPVEHIKARLQVQY-----AADKAQRLYSGP------------IDCLKKIFANHGVRGVYHGLASTLLFRTFFCFWWGTYDIFT--EAFKKNTNLSAPAINFWAGGLSAQIFWLTSYPSDVVKQRIMTDPLGADRKYPRWRDAAKAVWRENGWRGYWRGFVPCFLRAFPANAMALVAFEGV 313          
BLAST of mRNA_P-wetherbeei_contig9597.1.1 vs. uniprot
Match: A0A7S0DT15_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DT15_9EUKA)

HSP 1 Score: 87.8 bits (216), Expect = 3.030e-16
Identity = 81/311 (26.05%), Postives = 123/311 (39.55%), Query Frame = 1
Query:   13 AGAVSGFVQVLVEYPIDTLKTRVSAQFLDHNKGSHEWRTPRHVLVGTLRNEGVTALWQGASSRFATLSL-----------IKASQFSLYQRFLNATGGQPAMSGFLTGIVNTYCTVPVDVIKCRLQVYRRNTV----PAAGGAGVGGPXXPTAPSSRP----SVVRLVAGLLRNHGVAAFYAGWAAHAARDAV-------GYAALFTAFTSLRQR-------TDLPMPVCGAAAGVCFYLVALPADRVKVLMQTQDLAHPRRFAGAVACWRHVWRTEGLRGAYLGCTPALLKTVVGQGAALFAYEAVHGRL 846
            + A  G   V+   P DT+K R+  +       +  +R P    + T+ +EG  AL++G S  F ++ +           IK +  ++ +     T G+ A+ G + GI +     P +VIKCRLQV R NTV    P   G+ V      +   SRP      +  +   +R  G    + G ++   RD          Y A+      LR         + L +   G  AGV  + V  P D VK  MQT     P      V  +R +W T+G    Y G + ALL+           YE    +L
Sbjct:   23 SAAFGGICNVIAGQPFDTIKVRLQTE-----SSTKVFRGPFDCFLRTVSDEGFFALYKGTSGAFVSIMVENVVLLTANTGIKRALKNIRKDDSPLTLGEKALCGGVAGIFSAVAITPAEVIKCRLQVSRNNTVALATPNISGSSVSHSRCVSLECSRPPRYAGPIDCLLQTIRKEGYGGLFRGLSSVLVRDLPFNFMFLGSYEAVIHCLVGLRGSNASKDTLSSLEILTAGGIAGVVGWAVVFPIDVVKSRMQTSHRKDP----SMVRVFRKIWLTDGPFAFYRGVSAALLRAFPANAGLFLGYEMAQRKL 324          
BLAST of mRNA_P-wetherbeei_contig9597.1.1 vs. uniprot
Match: A0A8H7S5R9_9FUNG (Uncharacterized protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7S5R9_9FUNG)

HSP 1 Score: 87.0 bits (214), Expect = 3.700e-16
Identity = 77/299 (25.75%), Postives = 124/299 (41.47%), Query Frame = 1
Query:   13 AGAVSGFVQVLVEYPIDTLKTRVSAQFLDHNKGSHEWRTPRHVLVGTLRNEGVTALWQGASSRFA------TLSLIKASQFSLYQRFLNA----TGGQPAMSGFLTGIVNTYCTVPVDVIKCRLQVYRRNTVPAAGGAGVGGPXXPTAPSSRPSVVRLVAGLLRNHGVAAFYAG--------------WAAHAARDAVGYAALFTAFTSLRQRTDLPMP-VCGAAAGVCFYLVALPADRVKVLMQTQDLAHPRRFAGAVACWRHVWRTEGLRGAYLGCTPALLKTVVGQGAALFAYEAV 834
            AG  SG  ++ V +P DT+K R+     D  KG      P   L+ T+R EGV AL++GA+          ++ L       L Q+  N     T  Q  ++G   G+  ++   PV+ IK RLQV    +     G                  +     L+RN+G+ A + G              WA++          +FT      + +D     + G  +   F++ A PAD VK    TQ    P+++   ++  +H++ T GLRG Y G  P+ ++      AA+ A+E V
Sbjct:   29 AGVASGITKLTVGHPFDTVKVRMQTSSNDRFKG------PLDCLMKTVRQEGVRALYKGATPPLVGWMFMDSIMLGTLHNARLIQQKWNGDKPLTVFQHGLAGLAGGLTVSFVATPVEQIKSRLQVQYDASTKVYSGP-----------------INCATQLVRNNGITALWNGLLPTMLFRSWFFVFWASYD---------VFTRQLKKMEFSDGATTFIAGGLSATTFWIGAFPADSVKNRYMTQPDVTPKKYPTPMSVAKHIYNTNGLRGFYRGFLPSFIRAFPTNAAAVTAFETV 295          
BLAST of mRNA_P-wetherbeei_contig9597.1.1 vs. uniprot
Match: A0A072UMV7_MEDTR (Putative mitochondrial carrier domain-containing protein n=7 Tax=IRL clade TaxID=2233839 RepID=A0A072UMV7_MEDTR)

HSP 1 Score: 86.7 bits (213), Expect = 5.430e-16
Identity = 73/303 (24.09%), Postives = 129/303 (42.57%), Query Frame = 1
Query:   10 IAGAVSGFVQVLVEYPIDTLKTRVSAQFLDHNKGSH--EWRTPRHVLVGTLRNEGVTALWQGASSRFATLSLIKASQFSLY-------QRFLNATGGQPAM---SGFLTGIVNTYCTVPVDVIKCRLQVYRRNT-VPAAGGAGVGGPXXPTAPSSRPSVVRLVAGLLRNHGVAAFYAGWAAHAARDAVGYAALFTAFTSLRQRTDLPMP----------------VCGAAAGVCFYLVALPADRVKVLMQTQ-DLAHPRRFAGAVACWRHVWRTEGLRGAYLGCTPALLKTVVGQGAALFAYE 828
            +AG ++G   V   +P DT+K ++      HN  +H  ++R   H     L+ EG+  L++GA+S FA ++L  +  F +Y       Q  + +   +P +   S    G +N++   P ++IKCR+Q+   ++ VP +              S   S +      L++ GV   + G      R+++G A  F+ +  +R      +                 V G  +GV F+LV +P D  K L+QT  D   PR           +++  GL+G Y G  P + +      A +  +E
Sbjct:   13 VAGLLAGVAAVATGHPFDTVKVKLQT----HNTEAHLVQYRNGLHCTARILKTEGIKGLYRGATSSFAGMALEGSLFFGIYSQTKKYLQGGMQSGAPRPQVIIPSAAFAGAINSFVLGPTELIKCRMQIQGTDSLVPMS--------------SRYSSPLDCALKTLQSEGVKGIFRGSGTTLLRESIGNATFFSVYEYMRYHMHSRIKPASSNYNNLIEIGIGVVTGGVSGVAFWLVVMPLDVAKTLIQTNPDKNCPRN---PFTILSSIYKRTGLKGCYAGLGPTVSRAFPANAATIVTWE 294          
BLAST of mRNA_P-wetherbeei_contig9597.1.1 vs. uniprot
Match: A0A015IP38_RHIIW (Ort1p n=9 Tax=Rhizophagus TaxID=1129544 RepID=A0A015IP38_RHIIW)

HSP 1 Score: 86.3 bits (212), Expect = 1.220e-15
Identity = 79/321 (24.61%), Postives = 131/321 (40.81%), Query Frame = 1
Query:   10 IAGAVSGFVQVLVEYPIDTLKTRVSAQFLDHNKGSHEWRTPRHVLVGTLRNEGVTALWQGASSRFATLSLIKASQFSLYQR------------FLNATGGQPAMS-------GFLTGIVNTYCTVPVDVIKCRLQVYRRNTVPAAGGAGVGGPXXPTAPSSRPSVVRLVAGLLRNHGVAAFYAGWAAHAARDAVGYAALFTAF--------------TSLRQRTDLP--------MPVCGAAAGVCFYLVALPADRVKVLMQTQDLAHPRRFAGAVACWRHVWR-------TEGLRGAYLGCTPALLKTVVGQGAALFAYE 828
            I G+++G    LVEYP DT+KTR+ +Q  ++      +  P      TL++EG+  L++G S       L  AS F +Y              + N +  Q  +S       G L+G   ++   P+++IKC+LQV    T      + +  P     P        ++   L+ HG++ FY G +    R+ VG AA F+ +              +S  +R ++         +   GA AG+ + L+  P D +K  MQT +     +  G     R  WR       ++G+ G Y GC   + +           YE
Sbjct:   33 IFGSIAGMTGKLVEYPFDTVKTRLQSQPSEYKL----FNGPLDCFRQTLKHEGLFGLYRGMSPPMIGAMLENASLFLVYNHIQTMVREFKTPNYNNESQHQAPLSMSVVCLAGGLSGTTASFFLTPIELIKCKLQVQEAFTYKMERNSMITNPRY-NGPFD------VIKHTLKTHGISGFYRGHSGTIVRETVGTAAWFSTYEFLTRLFILNRIDKSSFNERQNITKDDLSAIELMSSGACAGMAYNLLMFPVDSIKSQMQTDE--EIMKITGKDVVKRGFWRVGRELYKSDGISGFYRGCGITVARAAPSSAIIFMTYE 340          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9597.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2RY90_9STRA5.640e-6143.84Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A8J6C1E7_DIALT8.530e-3734.78Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A7S1IF04_9EUGL1.010e-3445.03Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
A0A1S4ARF6_TOBAC1.410e-1826.44mitochondrial arginine transporter BAC2 n=4 Tax=Ni... [more]
A0A1Y2GAS2_9FUNG1.600e-1726.00Mitochondrial carrier domain-containing protein n=... [more]
A0A6A6VDE5_9PLEO1.810e-1627.78Mitochondrial carnitine/acylcarnitine carrier prot... [more]
A0A7S0DT15_9EUKA3.030e-1626.05Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
A0A8H7S5R9_9FUNG3.700e-1625.75Uncharacterized protein n=1 Tax=Mucor circinatus T... [more]
A0A072UMV7_MEDTR5.430e-1624.09Putative mitochondrial carrier domain-containing p... [more]
A0A015IP38_RHIIW1.220e-1524.61Ort1p n=9 Tax=Rhizophagus TaxID=1129544 RepID=A0A0... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9597contigP-wetherbeei_contig9597:287..1165 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog44056.XP_009041699.1
PFAMsMito_carr
Model size879
Max annot lvl2759|Eukaryota
KEGG koko:K15109
KEGG TC2.A.29.8
KEGG Pathwayko04714,map04714
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.61e-44
EggNOG OGsKOG0758@1|root,KOG0758@2759|Eukaryota
Descriptionmitochondrial transport
Cds size879
COG categoryU
BRITEko00000,ko00001,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187100.913519-CDS-P-wetherbeei_contig9597:286..11651683187100.913519-CDS-P-wetherbeei_contig9597:286..1165Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9597 287..1165 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9597.1.1prot_P-wetherbeei_contig9597.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig9597 287..1165 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig9597.1.1

>prot_P-wetherbeei_contig9597.1.1 ID=prot_P-wetherbeei_contig9597.1.1|Name=mRNA_P-wetherbeei_contig9597.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=293bp
AATIAGAVSGFVQVLVEYPIDTLKTRVSAQFLDHNKGSHEWRTPRHVLVG
TLRNEGVTALWQGASSRFATLSLIKASQFSLYQRFLNATGGQPAMSGFLT
GIVNTYCTVPVDVIKCRLQVYRRNTVPAAGGAGVGGPPPPTAPSSRPSVV
RLVAGLLRNHGVAAFYAGWAAHAARDAVGYAALFTAFTSLRQRTDLPMPV
CGAAAGVCFYLVALPADRVKVLMQTQDLAHPRRFAGAVACWRHVWRTEGL
RGAYLGCTPALLKTVVGQGAALFAYEAVHGRLVVGDGKEGER*
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mRNA from alignment at P-wetherbeei_contig9597:287..1165-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig9597.1.1 ID=mRNA_P-wetherbeei_contig9597.1.1|Name=mRNA_P-wetherbeei_contig9597.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=879bp|location=Sequence derived from alignment at P-wetherbeei_contig9597:287..1165- (Phaeothamnion wetherbeei SAG_119_79)
GCTGCAACTATAGCGGGAGCTGTATCCGGATTTGTTCAAGTCCTGGTCGA GTATCCTATAGACACTCTCAAAACACGCGTCTCTGCGCAGTTTTTAGACC ACAACAAAGGCAGCCATGAATGGCGTACGCCCAGGCACGTGCTTGTGGGT ACTCTCCGGAACGAGGGCGTCACGGCTTTGTGGCAGGGCGCCTCGAGCCG CTTTGCCACGTTATCACTCATTAAGGCTTCCCAGTTCTCCCTTTATCAGA GGTTTCTCAACGCCACAGGCGGCCAACCCGCCATGTCAGGGTTCCTGACC GGAATCGTGAACACCTACTGCACGGTGCCGGTCGACGTCATAAAGTGTCG CCTACAAGTCTATCGGCGGAACACGGTTCCGGCTGCCGGGGGTGCCGGCG TCGGCGGCCCGCCGCCGCCAACGGCGCCCTCTTCGCGGCCGAGCGTCGTG CGCTTGGTTGCCGGCCTGCTGCGCAACCACGGCGTTGCCGCCTTTTATGC CGGCTGGGCGGCGCACGCCGCCCGCGACGCCGTCGGCTACGCGGCCCTAT TCACCGCCTTCACGTCGCTCCGCCAAAGGACGGACCTGCCCATGCCCGTT TGCGGCGCCGCTGCTGGCGTCTGCTTTTATCTGGTCGCTCTGCCGGCAGA CCGTGTCAAGGTGCTCATGCAGACGCAAGACTTGGCGCATCCACGGCGCT TCGCTGGCGCTGTCGCCTGTTGGCGACACGTCTGGCGGACGGAAGGGCTC CGGGGCGCTTATCTCGGGTGCACGCCGGCGCTGCTGAAAACGGTAGTGGG GCAGGGCGCCGCGCTTTTTGCGTACGAGGCGGTGCACGGCCGCCTCGTTG TCGGTGACGGGAAGGAGGGTGAGCGGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig9597:287..1165-

>mRNA_P-wetherbeei_contig9597.1.1 ID=mRNA_P-wetherbeei_contig9597.1.1|Name=mRNA_P-wetherbeei_contig9597.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=879bp|location=Sequence derived from alignment at P-wetherbeei_contig9597:287..1165- (Phaeothamnion wetherbeei SAG_119_79)
GCTGCAACTATAGCGGGAGCTGTATCCGGATTTGTTCAAGTCCTGGTCGA
GTATCCTATAGACACTCTCAAAACACGCGTCTCTGCGCAGTTTTTAGACC
ACAACAAAGGCAGCCATGAATGGCGTACGCCCAGGCACGTGCTTGTGGGT
ACTCTCCGGAACGAGGGCGTCACGGCTTTGTGGCAGGGCGCCTCGAGCCG
CTTTGCCACGTTATCACTCATTAAGGCTTCCCAGTTCTCCCTTTATCAGA
GGTTTCTCAACGCCACAGGCGGCCAACCCGCCATGTCAGGGTTCCTGACC
GGAATCGTGAACACCTACTGCACGGTGCCGGTCGACGTCATAAAGTGTCG
CCTACAAGTCTATCGGCGGAACACGGTTCCGGCTGCCGGGGGTGCCGGCG
TCGGCGGCCCGCCGCCGCCAACGGCGCCCTCTTCGCGGCCGAGCGTCGTG
CGCTTGGTTGCCGGCCTGCTGCGCAACCACGGCGTTGCCGCCTTTTATGC
CGGCTGGGCGGCGCACGCCGCCCGCGACGCCGTCGGCTACGCGGCCCTAT
TCACCGCCTTCACGTCGCTCCGCCAAAGGACGGACCTGCCCATGCCCGTT
TGCGGCGCCGCTGCTGGCGTCTGCTTTTATCTGGTCGCTCTGCCGGCAGA
CCGTGTCAAGGTGCTCATGCAGACGCAAGACTTGGCGCATCCACGGCGCT
TCGCTGGCGCTGTCGCCTGTTGGCGACACGTCTGGCGGACGGAAGGGCTC
CGGGGCGCTTATCTCGGGTGCACGCCGGCGCTGCTGAAAACGGTAGTGGG
GCAGGGCGCCGCGCTTTTTGCGTACGAGGCGGTGCACGGCCGCCTCGTTG
TCGGTGACGGGAAGGAGGGTGAGCGGTGA
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