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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 1513 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Cds size | 984 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683187100.4690793-UTR-P-wetherbeei_contig959:6234..6392 | 1683187100.4690793-UTR-P-wetherbeei_contig959:6234..6392 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig959 6235..6392 + |
| 1683187100.503684-UTR-P-wetherbeei_contig959:7674..8045 | 1683187100.503684-UTR-P-wetherbeei_contig959:7674..8045 | Phaeothamnion wetherbeei SAG_119_79 | UTR | P-wetherbeei_contig959 7675..8045 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1683187100.4777226-CDS-P-wetherbeei_contig959:6392..6947 | 1683187100.4777226-CDS-P-wetherbeei_contig959:6392..6947 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig959 6393..6947 + |
| 1683187100.4860585-CDS-P-wetherbeei_contig959:7120..7327 | 1683187100.4860585-CDS-P-wetherbeei_contig959:7120..7327 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig959 7121..7327 + |
| 1683187100.494955-CDS-P-wetherbeei_contig959:7452..7674 | 1683187100.494955-CDS-P-wetherbeei_contig959:7452..7674 | Phaeothamnion wetherbeei SAG_119_79 | CDS | P-wetherbeei_contig959 7453..7674 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig959.5.1 >prot_P-wetherbeei_contig959.5.1 ID=prot_P-wetherbeei_contig959.5.1|Name=mRNA_P-wetherbeei_contig959.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=328bp
MKVPLALALSRADELMGGACNQPWDFSKPPATECGDDEINVERSATAPNT
PSMPDPGLPFPEVAPDAAAAAADGSSTEDVDNEPHYTDIVLDGDGGIPVN
RAVLMSGIIVAFAEVGNYRAVRLMLENGEDANAVDKDDNTSLHVAAANGH
GELVWLLLSNGADVTLKNLLEDTPLHDACRRGRLGIVHMLLDAGASKEAK
NDMGDTPLHSAAWGGWPEVVQMLIDAEAAVEATNTALFMPIHLAAQRGDV
ESMTALVKAGAGVKRACRGGAQPIHLACAGGHVAAVEWLLRHSANGAARD
DENRAPVDCIGAGVDAAAKETLRRLLG* back to topmRNA from alignment at P-wetherbeei_contig959:6235..8045+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-wetherbeei_contig959.5.1 ID=mRNA_P-wetherbeei_contig959.5.1|Name=mRNA_P-wetherbeei_contig959.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1811bp|location=Sequence derived from alignment at P-wetherbeei_contig959:6235..8045+ (Phaeothamnion wetherbeei SAG_119_79)
GACGTATTCGTTCAGCGCCCTCCTCCGCAGGGAGCACCCGGTCGCCGTTT
TACGCTTTCAGCGCCATCTTTCTCCTCCTTCAGCAAACCTAGCGCCAGAC
TTTTTGGCAGAGAGACCAATCTCTCGTCCTCTCACGCAACCAAACACAAG
CCGTGAAGATGAAAGTGCCGTTGGCCCTCGCTCTAAGTCGAGCAGATGAA
CTTATGGGTGGTGCCTGCAATCAGCCGTGGGATTTTTCAAAGCCGCCGGC
GACAGAATGCGGCGATGACGAGATCAACGTAGAGCGCTCGGCGACGGCTC
CAAACACGCCATCCATGCCGGACCCGGGTTTGCCCTTCCCCGAAGTCGCT
CCAGACGCAGCCGCAGCTGCTGCGGACGGTTCATCGACAGAAGACGTCGA
CAACGAGCCTCACTACACCGACATAGTCCTCGACGGCGACGGCGGCATCC
CGGTGAACCGCGCCGTGCTCATGAGCGGAATCATTGTGGCCTTCGCCGAA
GTCGGCAACTATCGTGCCGTCCGCCTCATGCTGGAGAACGGCGAGGACGC
CAACGCCGTCGACAAGGACGACAACACCTCGCTGCACGTCGCGGCGGCCA
ACGGCCACGGCGAGCTGGTGTGGCTCCTCCTCTCTAACGGCGCAGACGTG
ACGCTGAAAAATCTGCTGGAGGACACACCGCTGCATGACGCCTGCCGACG
AGGCCGCCTTGGGGTGAGTAAAATAAAATTACTACCTTGCCTTTCCCGAG
CTGCTGCAAAGAAAGAAGGCCTTGTTTGAGTTTTTTGTTTACGGTGCGTG
CAGTCTGGATTCCGGATGCGCTGAAACGGTTGCCTTTTCCATCGCTGCGT
AATGCCAACTCTCCATTTTCCAATCTACTCCATCAGATCGTACACATGCT
GCTGGATGCTGGCGCTAGTAAAGAGGCCAAAAACGACATGGGCGACACCC
CGTTGCACTCGGCTGCCTGGGGCGGCTGGCCGGAGGTGGTTCAGATGCTC
ATTGATGCCGAAGCAGCGGTGGAGGCGACCAACACAGCGCTTTTCATGCC
AATCCACCTGGCGGCGCAGCGCGGAGACGTCGAGAGCATGACGGTGCGTT
GGCCTGCGCGTCAGAGCGGCCCCCCGGAACGAAAAAGAAAGAAGAAGGCT
TGGCCATTGCGACTATGCAGCTATCTCATCCCTTGGCTCTATCTCCTCTT
TTCTCGCTCATGTCGCAGGCACTGGTGAAGGCCGGGGCGGGAGTCAAGCG
CGCCTGTCGTGGCGGCGCACAGCCGATCCACCTGGCATGCGCGGGCGGTC
ACGTTGCGGCGGTGGAGTGGCTGCTTCGCCACAGTGCCAATGGCGCGGCG
CGTGACGACGAAAACCGCGCGCCCGTGGATTGCATCGGTGCCGGGGTTGA
CGCGGCAGCCAAGGAGACGCTGCGGCGGCTCCTCGGCTGAAGAAAGCGAG
AGGGGAAATACCCGTTGGGGAAATTCATGGCCATTGCTAATCAATCCTTT
TGGGGGGCTGAGAGTGCTGAATGGGAGGCTGTTGGAGCGTACGTTCCTAC
GTTTGTTAGGGAAGTGGCTAAAAGTTATACAATGGTCAGAGTGCGTAGAT
GGCGACTGAGAAGCAACGGATGCGGGAGTAGGTGATTGGTCGCCGAGGCA
GCAAACTGGCGTTTGCAGCGAGCGTGCGTTGCGTTAGCGCGCTGCCATTG
GGGAGGTCAAAGTATATAAGAGGGACGACTAGCCGCGAATTCCCTTTCTG
CATACGACTTGGCAGCCTCGTTGTCACGTCCTACGACGTGCACCGTCGAT
TGAGCGTAAAG back to topCoding sequence (CDS) from alignment at P-wetherbeei_contig959:6235..8045+ >mRNA_P-wetherbeei_contig959.5.1 ID=mRNA_P-wetherbeei_contig959.5.1|Name=mRNA_P-wetherbeei_contig959.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=984bp|location=Sequence derived from alignment at P-wetherbeei_contig959:6235..8045+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAAAGTGCCGTTGGCCCTCGCTCTAAGTCGAGCAGATGAACTTATGGG
TGGTGCCTGCAATCAGCCGTGGGATTTTTCAAAGCCGCCGGCGACAGAAT
GCGGCGATGACGAGATCAACGTAGAGCGCTCGGCGACGGCTCCAAACACG
CCATCCATGCCGGACCCGGGTTTGCCCTTCCCCGAAGTCGCTCCAGACGC
AGCCGCAGCTGCTGCGGACGGTTCATCGACAGAAGACGTCGACAACGAGC
CTCACTACACCGACATAGTCCTCGACGGCGACGGCGGCATCCCGGTGAAC
CGCGCCGTGCTCATGAGCGGAATCATTGTGGCCTTCGCCGAAGTCGGCAA
CTATCGTGCCGTCCGCCTCATGCTGGAGAACGGCGAGGACGCCAACGCCG
TCGACAAGGACGACAACACCTCGCTGCACGTCGCGGCGGCCAACGGCCAC
GGCGAGCTGGTGTGGCTCCTCCTCTCTAACGGCGCAGACGTGACGCTGAA
AAATCTGCTGGAGGACACACCGCTGCATGACGCCTGCCGACGAGGCCGCC
TTGGGATCGTACACATGCTGCTGGATGCTGGCGCTAGTAAAGAGGCCAAA
AACGACATGGGCGACACCCCGTTGCACTCGGCTGCCTGGGGCGGCTGGCC
GGAGGTGGTTCAGATGCTCATTGATGCCGAAGCAGCGGTGGAGGCGACCA
ACACAGCGCTTTTCATGCCAATCCACCTGGCGGCGCAGCGCGGAGACGTC
GAGAGCATGACGGCACTGGTGAAGGCCGGGGCGGGAGTCAAGCGCGCCTG
TCGTGGCGGCGCACAGCCGATCCACCTGGCATGCGCGGGCGGTCACGTTG
CGGCGGTGGAGTGGCTGCTTCGCCACAGTGCCAATGGCGCGGCGCGTGAC
GACGAAAACCGCGCGCCCGTGGATTGCATCGGTGCCGGGGTTGACGCGGC
AGCCAAGGAGACGCTGCGGCGGCTCCTCGGCTGA back to top
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