mRNA_P-wetherbeei_contig9587.2.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig9587.2.2
Unique NamemRNA_P-wetherbeei_contig9587.2.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig9587.2.2 vs. uniprot
Match: A0A2U1P9Z3_ARTAN (Nudix hydrolase n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1P9Z3_ARTAN)

HSP 1 Score: 61.2 bits (147), Expect = 6.110e-8
Identity = 33/54 (61.11%), Postives = 39/54 (72.22%), Query Frame = 2 
Query:    8 MFPKGGWENDETVEEAASREAWEEAGVSKSTELFPFFLSLFSETRT*RLQDECT 169
            +FPKGGWENDETVEEAA REAWEEAGV    +L  F      +++T  LQDEC+
Sbjct:   59 LFPKGGWENDETVEEAAVREAWEEAGVRG--DLMHFLGHFHFKSKT--LQDECS 108
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BLAST of mRNA_P-wetherbeei_contig9587.2.2 vs. uniprot
Match: A0A0B7KJF2_BIOOC (Nudix hydrolase domain-containing protein n=1 Tax=Bionectria ochroleuca TaxID=29856 RepID=A0A0B7KJF2_BIOOC)

HSP 1 Score: 58.5 bits (140), Expect = 3.330e-7
Identity = 30/60 (50.00%), Postives = 39/60 (65.00%), Query Frame = 2 
Query:    5 WMFPKGGWENDETVEEAASREAWEEAGVSKSTELFPFFLSLFSETRT*RL-QDECTFAYY 181
            W+ PKGGWE+DET E+AASREAWEEAG+S   +   F LS   E R  +  +D   + +Y
Sbjct:   53 WVLPKGGWESDETCEQAASREAWEEAGISIQID---FNLSTIEEKRARKSSKDRAVYHFY 109
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BLAST of mRNA_P-wetherbeei_contig9587.2.2 vs. uniprot
Match: A0A0A1TQD4_9HYPO (Putative Diadenosine hexaphosphate hydrolase n=1 Tax=Torrubiella hemipterigena TaxID=1531966 RepID=A0A0A1TQD4_9HYPO)

HSP 1 Score: 57.8 bits (138), Expect = 7.410e-7
Identity = 28/60 (46.67%), Postives = 42/60 (70.00%), Query Frame = 2 
Query:    5 WMFPKGGWENDETVEEAASREAWEEAGVSKSTELFPFFLSLFSETRT*RL-QDECTFAYY 181
            W+ PKGGWE+DET EEAA+REAWEEAG++   +L    L +  E+R  ++ +D+  + +Y
Sbjct:   62 WVLPKGGWESDETCEEAATREAWEEAGITIQIDLD---LGVIEESRPLKMSKDQSQYHFY 118
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BLAST of mRNA_P-wetherbeei_contig9587.2.2 vs. uniprot
Match: A0A2C9W4D4_MANES (Nudix hydrolase domain-containing protein n=6 Tax=Euphorbiaceae TaxID=3977 RepID=A0A2C9W4D4_MANES)

HSP 1 Score: 57.4 bits (137), Expect = 1.060e-6
Identity = 32/53 (60.38%), Postives = 39/53 (73.58%), Query Frame = 2 
Query:    8 MFPKGGWENDETVEEAASREAWEEAGVSKSTELFPFFLSLFSETRT*RLQDEC 166
            +FPKGGWENDETVEEAA+REA EEAGV    +L  F  +   +++T  LQDEC
Sbjct:   59 LFPKGGWENDETVEEAAAREAIEEAGVRG--DLMDFIGNYHFKSKT--LQDEC 107
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BLAST of mRNA_P-wetherbeei_contig9587.2.2 vs. uniprot
Match: A0A2G5EWK5_AQUCA (Nudix hydrolase domain-containing protein n=2 Tax=Thalictroideae TaxID=1463137 RepID=A0A2G5EWK5_AQUCA)

HSP 1 Score: 57.8 bits (138), Expect = 1.060e-6
Identity = 25/28 (89.29%), Postives = 28/28 (100.00%), Query Frame = 2 
Query:    5 WMFPKGGWENDETVEEAASREAWEEAGV 88
            ++FPKGGWENDETVEEAA+REAWEEAGV
Sbjct:   57 FLFPKGGWENDETVEEAAAREAWEEAGV 84
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BLAST of mRNA_P-wetherbeei_contig9587.2.2 vs. uniprot
Match: A0A0R0KE69_SOYBN (Nudix hydrolase domain-containing protein n=11 Tax=Phaseoleae TaxID=163735 RepID=A0A0R0KE69_SOYBN)

HSP 1 Score: 56.6 bits (135), Expect = 2.130e-6
Identity = 32/54 (59.26%), Postives = 36/54 (66.67%), Query Frame = 2 
Query:    8 MFPKGGWENDETVEEAASREAWEEAGVSKSTELFPFFLSLFSETRT*RLQDECT 169
            +FPKGGWENDETVEEAA REA EEAGV      F  +    S+T    LQDEC+
Sbjct:   57 LFPKGGWENDETVEEAAVREAIEEAGVRGDLMDFLGYYEFRSKT----LQDECS 106
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BLAST of mRNA_P-wetherbeei_contig9587.2.2 vs. uniprot
Match: A0A086SUB3_ACRC1 (Diphosphoinositol polyphosphate phosphohydrolase-like protein n=1 Tax=Acremonium chrysogenum (strain ATCC 11550 / CBS 779.69 / DSM 880 / IAM 14645 / JCM 23072 / IMI 49137) TaxID=857340 RepID=A0A086SUB3_ACRC1)

HSP 1 Score: 56.2 bits (134), Expect = 2.410e-6
Identity = 27/59 (45.76%), Postives = 37/59 (62.71%), Query Frame = 2 
Query:    5 WMFPKGGWENDETVEEAASREAWEEAGVSKSTELFPFFLSLFSETRT*RLQDECTFAYY 181
            W+ PKGGWE+DET E+AA+REAWEE G++   +   F LS   E R  +   E +  Y+
Sbjct:   56 WVLPKGGWESDETCEQAATREAWEEGGINVRID---FSLSSIKEKRAPKTSKERSVYYF 111
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BLAST of mRNA_P-wetherbeei_contig9587.2.2 vs. uniprot
Match: A0A084AW66_STACB (Nudix hydrolase domain-containing protein n=3 Tax=Stachybotrys TaxID=74721 RepID=A0A084AW66_STACB)

HSP 1 Score: 55.5 bits (132), Expect = 4.640e-6
Identity = 27/59 (45.76%), Postives = 38/59 (64.41%), Query Frame = 2 
Query:    5 WMFPKGGWENDETVEEAASREAWEEAGVSKSTELFPFFLSLFSETRT*RLQDECTFAYY 181
            W+ PKGGWE+DET ++AA+REAWEEAG+S   +   + L  F E R  +   E +  Y+
Sbjct:   57 WVLPKGGWESDETCQDAAAREAWEEAGISIQVD---YDLGNFEEKRPPKSSKERSRYYF 112
[Close]
BLAST of mRNA_P-wetherbeei_contig9587.2.2 vs. uniprot
Match: A0A1Y1ZLD6_9FUNG (Nudix hydrolase domain-containing protein (Fragment) n=1 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y1ZLD6_9FUNG)

HSP 1 Score: 54.7 bits (130), Expect = 6.290e-6
Identity = 23/28 (82.14%), Postives = 24/28 (85.71%), Query Frame = 2 
Query:    5 WMFPKGGWENDETVEEAASREAWEEAGV 88
            W+FPKGGWENDETV  AA RE WEEAGV
Sbjct:   28 WIFPKGGWENDETVTSAAMRETWEEAGV 55
[Close]
BLAST of mRNA_P-wetherbeei_contig9587.2.2 vs. uniprot
Match: A0A8B7CE47_PHODC (nudix hydrolase 12, mitochondrial-like n=1 Tax=Phoenix dactylifera TaxID=42345 RepID=A0A8B7CE47_PHODC)

HSP 1 Score: 55.8 bits (133), Expect = 6.320e-6
Identity = 24/29 (82.76%), Postives = 28/29 (96.55%), Query Frame = 2 
Query:    2 DWMFPKGGWENDETVEEAASREAWEEAGV 88
            D++FPKGGWENDE+VE+AA REAWEEAGV
Sbjct:   58 DFIFPKGGWENDESVEQAARREAWEEAGV 86
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9587.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2U1P9Z3_ARTAN6.110e-861.11Nudix hydrolase n=1 Tax=Artemisia annua TaxID=3560... [more]
A0A0B7KJF2_BIOOC3.330e-750.00Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A0A1TQD4_9HYPO7.410e-746.67Putative Diadenosine hexaphosphate hydrolase n=1 T... [more]
A0A2C9W4D4_MANES1.060e-660.38Nudix hydrolase domain-containing protein n=6 Tax=... [more]
A0A2G5EWK5_AQUCA1.060e-689.29Nudix hydrolase domain-containing protein n=2 Tax=... [more]
A0A0R0KE69_SOYBN2.130e-659.26Nudix hydrolase domain-containing protein n=11 Tax... [more]
A0A086SUB3_ACRC12.410e-645.76Diphosphoinositol polyphosphate phosphohydrolase-l... [more]
A0A084AW66_STACB4.640e-645.76Nudix hydrolase domain-containing protein n=3 Tax=... [more]
A0A1Y1ZLD6_9FUNG6.290e-682.14Nudix hydrolase domain-containing protein (Fragmen... [more]
A0A8B7CE47_PHODC6.320e-682.76nudix hydrolase 12, mitochondrial-like n=1 Tax=Pho... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9587contigP-wetherbeei_contig9587:722..1831 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Model size708
Hectar predicted targeting categoryother localisation
Exons3
Cds size474
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187100.3458066-CDS-P-wetherbeei_contig9587:721..9411683187100.3458066-CDS-P-wetherbeei_contig9587:721..941Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9587 722..941 -
1683187100.3577008-CDS-P-wetherbeei_contig9587:1204..12891683187100.3577008-CDS-P-wetherbeei_contig9587:1204..1289Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9587 1205..1289 -
1683187100.3774343-CDS-P-wetherbeei_contig9587:1430..15991683187100.3774343-CDS-P-wetherbeei_contig9587:1430..1599Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9587 1431..1599 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187100.389262-UTR-P-wetherbeei_contig9587:1599..18311683187100.389262-UTR-P-wetherbeei_contig9587:1599..1831Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig9587 1600..1831 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9587.2.2prot_P-wetherbeei_contig9587.2.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig9587 722..1599 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig9587.2.2

>prot_P-wetherbeei_contig9587.2.2 ID=prot_P-wetherbeei_contig9587.2.2|Name=mRNA_P-wetherbeei_contig9587.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=158bp
MQSGGYLVRSGARRDQRRSRNIRIREPAGREVQALHVRPRGEAGGGIPRA
APRATTVHRGRGAGGDSAAGGAGSAGGRAASHSTRFTCRSGASCVTRKDT
QIGLWGFSRHPKEKWQKRMEDRVCCANGNIAKHVYIFSTQYGREEHKRRA
QALINYHV
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mRNA from alignment at P-wetherbeei_contig9587:722..1831-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig9587.2.2 ID=mRNA_P-wetherbeei_contig9587.2.2|Name=mRNA_P-wetherbeei_contig9587.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1110bp|location=Sequence derived from alignment at P-wetherbeei_contig9587:722..1831- (Phaeothamnion wetherbeei SAG_119_79)
AGATTGGATGTTCCCAAAGGGCGGGTGGGAGAACGACGAGACGGTCGAGG
AGGCCGCCTCGCGGGAGGCATGGGAGGAAGCTGGGGTGAGCAAGTCCACC
GAGCTCTTTCCCTTTTTTCTTTCTCTTTTCTCAGAAACGAGAACATGACG
TCTGCAGGACGAATGCACCTTTGCTTACTACTGAGATTATGCTGCCATTT
TTCCTCTTTGGGCGGTTGGCAAATGCCGTCCAATGCAATCTGGTGGGTAT
CTGGTCCGGTCAGGTGCGCGGCGAGATCAAAGGCGCTCTCGGAACATACG
AATTCGAGAGCCGGCGGGGCGAGAAGTGCAAGCTCTTCATGTACGTCCTC
GAGGCGAGGCTGGAGGCGGAATACCCAGAGCAGCACCGAGAGCGACGACT
GGCGAGTTTGGAATCCCTGTCGCTGTGGTCTGCTGCAAATGCTCCATCTT
TGCACTCAACAACCCTCTTCAACTCTTTCTTGCCTTTTCTCTTTTGCGTC
TGACACACTGCGCTACCTCGCCTCACTTTTCCATTTCGTCAGTTCACCGT
GGAAGAGGCGCTGGTGGTGATTCAGCGGCCGGAGGTGCGGGCAGCGCTGG
AGGCCGCGCTGCCTCTCATTCGACAAGGTGTGTCGCTTTCGTCGTTCTGC
GGAAATGAAGAGCCCGCCTCCGTCCAAACATGGCCCCCATGGAGCCGGCG
GGATGTCTACTCGGGCAGGAGCAGATCTTTTCCATGCGTTTCCCACAACC
GTTCCTTCTTGTTTTCCTGCAAGTGTAGTGTCTTCCCTCATTCCGTTCCG
CAGCACGCTCGTTGAACTTGTGTCGTCAGTTGTGTTTACATTAAGGCGTT
GACGTGTTTATCATCTTTTCTTCCCTTTCCCCCGTCACAGGTTCACCTGC
CGATCGGGCGCCAGTTGTGTAACCAGAAAGGATACGCAAATAGGGCTTTG
GGGGTTTTCAAGGCACCCCAAGGAAAAGTGGCAGAAAAGGATGGAGGACA
GGGTGTGCTGCGCGAACGGCAACATTGCGAAACACGTATACATATTCTCA
ACGCAATACGGACGAGAGGAACATAAGAGGCGAGCACAAGCGCTAATCAA
TTATCATGTT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig9587:722..1831-

>mRNA_P-wetherbeei_contig9587.2.2 ID=mRNA_P-wetherbeei_contig9587.2.2|Name=mRNA_P-wetherbeei_contig9587.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=474bp|location=Sequence derived from alignment at P-wetherbeei_contig9587:722..1831- (Phaeothamnion wetherbeei SAG_119_79)
ATGCAATCTGGTGGGTATCTGGTCCGGTCAGGTGCGCGGCGAGATCAAAG
GCGCTCTCGGAACATACGAATTCGAGAGCCGGCGGGGCGAGAAGTGCAAG
CTCTTCATGTACGTCCTCGAGGCGAGGCTGGAGGCGGAATACCCAGAGCA
GCACCGAGAGCGACGACTGTTCACCGTGGAAGAGGCGCTGGTGGTGATTC
AGCGGCCGGAGGTGCGGGCAGCGCTGGAGGCCGCGCTGCCTCTCATTCGA
CAAGGTTCACCTGCCGATCGGGCGCCAGTTGTGTAACCAGAAAGGATACG
CAAATAGGGCTTTGGGGGTTTTCAAGGCACCCCAAGGAAAAGTGGCAGAA
AAGGATGGAGGACAGGGTGTGCTGCGCGAACGGCAACATTGCGAAACACG
TATACATATTCTCAACGCAATACGGACGAGAGGAACATAAGAGGCGAGCA
CAAGCGCTAATCAATTATCATGTT
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