mRNA_P-wetherbeei_contig958.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig958.4.1 vs. uniprot
Match: A0A835Z8Y2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Y2_9STRA) HSP 1 Score: 269 bits (687), Expect = 2.860e-85 Identity = 145/237 (61.18%), Postives = 174/237 (73.42%), Query Frame = 2 Query: 377 DATEAGAGAATRREVLAGAAASALTGLLWAPSSAPAASLKSVNARLQGYGLPTVEKPPGGMSPLLEVYGRDTNRETLLVGWNYPSTWIVERPSLDRNSEDGTVATGDYQKGDTAFFFVGSKDLLGGSTLSSGDKALVTAVLQKAISQKGDNQYQSFKLKSVREGATAANGQKYYVARFSYELLTGAGFTVDREGCASLTTVGSGVQALVAATTAKRFKKLQPELEEIATSFRVYNGI 1087 D T A + R+ ++A +AA A L+ P A A LK+VNARL YGLP V KPP GM LLE+YGRD NRETLLV WNYP+ WI +RPSLD NSEDGTVATGDYQKGD+AF V D+LGG LS+ +KALV ++ ++I+QKG NQ Q+FKLK V EGAT A GQ+Y F Y+LLTGAGF V+R G SLT VG GVQ+++A TTA R KKLQP+L+EIATSFRVY+GI Sbjct: 45 DVTAAPQQVSRRQAMVAASAAIAAAVLMQEPQPASALGLKAVNARLADYGLPGVGKPPDGMKALLEIYGRDQNRETLLVTWNYPNGWITQRPSLDTNSEDGTVATGDYQKGDSAFLVVQPLDVLGGEKLSATNKALVEKLVLQSITQKGANQIQNFKLKKVTEGATGAKGQQYINVEFKYDLLTGAGFIVERVGYGSLTQVGKGVQSVMAVTTAARLKKLQPKLQEIATSFRVYDGI 281
BLAST of mRNA_P-wetherbeei_contig958.4.1 vs. uniprot
Match: D8LLI1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLI1_ECTSI) HSP 1 Score: 231 bits (589), Expect = 1.960e-70 Identity = 121/215 (56.28%), Postives = 153/215 (71.16%), Query Frame = 2 Query: 467 PSSAPAASLKSVNARLQGYGLPTVEKPPGGMSPLLEVYGRD---------TNRETLLVGWNYPSTWIVERPSLDRNSEDGTVATGDYQKGDTAFFFVGSKDLLGGSTLSSGDKALVTAVLQKAISQKGDNQYQSFKLKSVREGATAANGQKYYVARFSYELLTGAGFTVDREGCASLTTVGSGVQALVAATTAKRFKKLQPELEEIATSFRVYNG 1084 P+ A A S+ N RL Y LP V PGG + LLE YG+D +NR+ +LV WNYP WIV+RP+ D N E GTV+TGDY +GD+A FV K L+GGS+LSS D + VL+KA+SQKG+NQ+QSFKLKSV++G T NG KYY+A F YELLTGAGFTV+R+G AS+T +G+ V A+V ATTA R K ++P+L+EIA SFRVY G Sbjct: 83 PAPASAGSVAEANKRLSEYNLPPVVDVPGGFNTLLEGYGKDGALKNSLGSSNRDPILVTWNYPKGWIVQRPNTDTNKEAGTVSTGDYGRGDSAGLFVAPKSLIGGSSLSSKDT--MEGVLKKALSQKGENQFQSFKLKSVKDGETDFNGNKYYIADFQYELLTGAGFTVERKGVASVTQIGNSVNAVVGATTANRAKTVKPQLQEIARSFRVYEG 295
BLAST of mRNA_P-wetherbeei_contig958.4.1 vs. uniprot
Match: W7TXP4_9STRA (Uncharacterized protein n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TXP4_9STRA) HSP 1 Score: 197 bits (502), Expect = 3.550e-57 Identity = 108/208 (51.92%), Postives = 136/208 (65.38%), Query Frame = 2 Query: 476 APAASLKSVNARLQGYGLPTVEKPPGGMSPLLEVYGRDTN----RETLLVGWNYPSTWIVERPSLDRNSEDGTVATGDYQKGDTAFFFVGSKDLLGGSTLSSGDKALVTAVLQKAISQKGDNQYQSFKLKSVREGATAANGQKYYVARFSYELLTGAGFTVDREGCASLTTVGSGVQALVAATTAKRFKKLQPELEEIATSFRVYNGI 1087 A AA L VN+ L GYGLP + PGG SPL+EVYG+ RETLLV + YPS W+V +PS+D+N E+GT++ GDYQKGD+A F+V G S D V+++AI QK N YQ+FK+ R GA ANG +Y + F YELLTGAGFTVDR+G AS+T VG VQ L ATTA R+KK+ + +A SFRVY+GI Sbjct: 109 AQAAGLSKVNSELAGYGLPPILDVPGGFSPLVEVYGKAAGAKKERETLLVQFLYPSLWVVSKPSIDKNGEEGTISAGDYQKGDSAAFYVEEGPASGKLEQESAD--YFGEVVKRAIGQKSQNVYQNFKVLKKRPGAKGANGAQYTIVEFKYELLTGAGFTVDRKGVASVTQVGKNVQGLWVATTAARWKKIGNDCITMADSFRVYDGI 314
BLAST of mRNA_P-wetherbeei_contig958.4.1 vs. uniprot
Match: A0A4D9DCV0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DCV0_9STRA) HSP 1 Score: 194 bits (493), Expect = 5.270e-57 Identity = 107/208 (51.44%), Postives = 133/208 (63.94%), Query Frame = 2 Query: 476 APAASLKSVNARLQGYGLPTVEKPPGGMSPLLEVYGRDTN----RETLLVGWNYPSTWIVERPSLDRNSEDGTVATGDYQKGDTAFFFVGSKDLLGGSTLSSGDKALVTAVLQKAISQKGDNQYQSFKLKSVREGATAANGQKYYVARFSYELLTGAGFTVDREGCASLTTVGSGVQALVAATTAKRFKKLQPELEEIATSFRVYNGI 1087 A AA L VN L YGLP + PGG SPL+EVYG+ RETLLV + YPS W+V +PS+D+N E+GT++ GDYQKGD+A F+V G S D V+ +AI QK N YQ+FK+ R GA ANG +Y + F YELLTGAGFTVDR+G AS+T VG VQ L ATTA R+KK+ + +A SFRVY+GI Sbjct: 18 AQAAGLSKVNGELASYGLPPILDVPGGFSPLVEVYGKAAGAKKERETLLVQFLYPSLWVVSKPSIDKNGEEGTISAGDYQKGDSAAFYVEEGPASGKLEQESAD--YFGEVVTRAIGQKSQNVYQNFKVLKKRPGAKGANGAQYTIVEFKYELLTGAGFTVDRKGVASVTQVGKNVQGLWVATTAARWKKIGNDCITMADSFRVYDGI 223
BLAST of mRNA_P-wetherbeei_contig958.4.1 vs. uniprot
Match: A0A7R9WJF7_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WJF7_9STRA) HSP 1 Score: 187 bits (475), Expect = 1.630e-53 Identity = 109/220 (49.55%), Postives = 144/220 (65.45%), Query Frame = 2 Query: 425 AGAAASALTGLLWAP-SSAPAASLKSVNARLQGYGLPTVEKPPGGMSPLLEVYGRDTNRETLLVGWNYPSTWIVERPSLDRNSEDGTVATGDYQKGDTAFFFVGSKDLLGGSTLSSGDKALVTAVLQKAISQKGDNQYQSFKLKSVREGATAANGQKYYVARFSYELLTGAGFTVDREGCASLTTVGSGVQALVAATTAKRFKKLQPELEEIATSFRVYN 1081 A A A A + LL P + A AA L VNA+L+ GLP + K P G SPLLE++G+ NR LLV + +P W+V PSLD NSEDGTV G+Y KGDTA FFV +D + ++S K+ VLQKAISQK N YQ+FK+ +++ Q Y + F Y+L+TGAGF VDR+ AS+T+ G V+AL A+TA R+KKL+P L +IA+SFRVY+ Sbjct: 55 AAAGAVATSSLLQGPVAPAHAAKLSKVNAKLEALGLPAMGKVPDGFSPLLELWGKGANRFPLLVNFAHPLDWVVTTPSLDLNSEDGTVQAGEYGKGDTATFFV-YEDEGNVADIASQPKSFFENVLQKAISQKSANIYQNFKVTNIQPTKGGYQDQTYMIVDFKYQLVTGAGFEVDRKAVASVTSQGKAVEALWCASTAVRYKKLEPALRDIASSFRVYS 273
BLAST of mRNA_P-wetherbeei_contig958.4.1 vs. uniprot
Match: A0A7S2V7M0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7M0_9STRA) HSP 1 Score: 187 bits (476), Expect = 1.680e-53 Identity = 106/231 (45.89%), Postives = 147/231 (63.64%), Query Frame = 2 Query: 410 RREVL--AGAAASAL--TGLLWA-PSSAPAASLKSVNARLQGYGLPTVE-KPPGGMSPLLEVYGRDTNRETLLVGWNYPSTWIVERPSLDRNSEDGTVATGDYQKGDTAFFFVGSKDLLGGSTLSSGDKALVTAVLQKAISQKGDNQYQSFKLKSVREGATAANGQKYYVARFSYELLTGAGFTVDREGCASLTTVGSGVQALVAATTAKRFKKLQPELEEIATSFRVYNG 1084 RRE + AG AA A+ G+L + P SA A S+K N L YG+ E P G SPL+EV+G+D R L+ + YP+ W++++PS+ N E GT A G+YQKGD+A +VG ++ G ++ G K +++++ ++QKG+NQYQ+FK + GAT GQKYYV F YELLTGAGF +DR G A++T VQA+V ATT R+KKL +L IA SFR Y+G Sbjct: 59 RREAIINAGQAAGAIMIAGVLGSSPQSAEAKSIKEANNELTNYGVSPFEGNVPQGFSPLVEVWGKDGIRPPYLISFLYPALWVIQKPSMTTNGESGTYAAGNYQKGDSAAVYVGPSEVDGNDVMAKG-KDYISSIVLGGLTQKGENQYQNFKTTKIVAGATGLKGQKYYVVDFKYELLTGAGFYIDRRGVAAVTGTPKNVQAIVCATTDTRYKKLADDLHVIADSFRAYDG 288
BLAST of mRNA_P-wetherbeei_contig958.4.1 vs. uniprot
Match: A0A7R9ZTM7_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia arenysensis TaxID=697910 RepID=A0A7R9ZTM7_9STRA) HSP 1 Score: 181 bits (460), Expect = 3.480e-51 Identity = 112/223 (50.22%), Postives = 145/223 (65.02%), Query Frame = 2 Query: 431 AAASALTGLLWAPSSAPAASLKS-VNARLQGYGLPTVEKPPGGMSPLLEVYGRDTNRETLLVGWNYPSTWIVERPSLDRNSEDGTVATGDYQKGDTAFFFV----GSKDLLGGSTLSSGDKALVTAVLQKAISQKGDNQYQSFKLKSV--REGATAANGQKYYVARFSYELLTGAGFTVDREGCASLTTVGSGVQALVAATTAKRFKKLQPELEEIATSFRVY 1078 AAA A TG+L AP A AAS VNA+L+ +GLP + K GM PLLEVYG+ NR LLV N+P TW+V+ PS D N EDGT+ G+Y KGDTA F++ G + +G + S +KAL+ A ISQKG N YQ+FK+ V + G NG+ Y + F YELLTGAGF VDR G AS+T+ G+ V+ L AA+T +RFKK +P+L +I SFRV+ Sbjct: 58 AAALASTGVL-APLPANAASAADKVNAKLRAFGLPPINKVANGMKPLLEVYGKGKNRFPLLVLMNHPLTWVVQLPSNDVNGEDGTIQAGEYAKGDTATFYLYQEEGHVNDIGNAPKSLFEKALIGA-----ISQKGANVYQNFKVTKVNPQTGNPDYNGKDYVLCDFKYELLTGAGFEVDRRGVASITSDGAAVEVLWAASTRERFKKTEPQLRDIVESFRVF 274
BLAST of mRNA_P-wetherbeei_contig958.4.1 vs. uniprot
Match: A0A448Z5A1_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z5A1_9STRA) HSP 1 Score: 181 bits (459), Expect = 4.760e-51 Identity = 112/222 (50.45%), Postives = 139/222 (62.61%), Query Frame = 2 Query: 431 AAASALTGLLWAPSSAPAASLKSVNARLQGYGLPTVEKPPGGMSPLLEVYGRDTNRETLLVGWNYPSTWIVERPSLDRNSEDGTVATGDYQKGDTAFFFV----GSKDLLGGSTLSSGDKALVTAVLQKAISQKGDNQYQSFKLKSV--REGATAANGQKYYVARFSYELLTGAGFTVDREGCASLTTVGSGVQALVAATTAKRFKKLQPELEEIATSFRVY 1078 AAA A TG+L AP A A+ VNA+L+ YGLP + + P GM PLLEVYG+ NR LLV +P TW+V+ PS D N EDGTV G+Y KGDTA FF+ G D +G DKAL L K+ISQKG N YQ+FK+ V + G NG+ Y + F YELLTGAGF V R G AS+T+ G GV+ L AA+TA R+ K + L +I +FRVY Sbjct: 58 AAALASTGVL-APLPANASPTDKVNAKLKSYGLPPLTRVPKGMKPLLEVYGKGXNRFPLLVQMCHPLTWVVQLPSNDVNGEDGTVQAGEYAKGDTATFFLYEEEGHVDNIG-----KADKALFERALIKSISQKGANMYQNFKVTKVAPQTGNPEYNGKDYVLCDFKYELLTGAGFEVQRRGVASITSEGPGVEVLWAASTALRWGKTEETLRDIVGTFRVY 273
BLAST of mRNA_P-wetherbeei_contig958.4.1 vs. uniprot
Match: A0A7S4MBN6_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MBN6_9STRA) HSP 1 Score: 179 bits (455), Expect = 1.540e-50 Identity = 97/205 (47.32%), Postives = 136/205 (66.34%), Query Frame = 2 Query: 467 PSSAPAASLKSVNARLQGYGLPTVEKPPGGMSPLLEVYGRDTNRETLLVGWNYPSTWIVERPSLDRNSEDGTVATGDYQKGDTAFFFVGSKDLLGGSTLSSGDKALVTAVLQKAISQKGDNQYQSFKLKSVREGATAANGQKYYVARFSYELLTGAGFTVDREGCASLTTVGSGVQALVAATTAKRFKKLQPELEEIATSFRVYN 1081 P+ A +K VNA+L GLP ++K P G SPL E++G+ NR LLV + +P W+V PSLD NSEDGT+ G+Y KGDT+ FFV ++ + ++S K+ VLQKAISQK N YQ+FK+K+++ Q Y + F Y+L+TGAGF VDR+ AS+T+ G+ V+AL A+TA R+KK++P L +IA SFRVY+ Sbjct: 70 PALALGGGIKKVNAKLASLGLPEMKKLPDGFSPLCELWGKGANRFPLLVNFAHPLDWVVTTPSLDLNSEDGTIQAGEYGKGDTSTFFV-YEEPGNVADIASQPKSFFEDVLQKAISQKSANIYQNFKVKNIQPTKGEYKDQTYVIVDFQYQLVTGAGFEVDRKAVASVTSQGNAVEALWCASTAIRYKKMEPALRDIAGSFRVYS 273
BLAST of mRNA_P-wetherbeei_contig958.4.1 vs. uniprot
Match: B5Y4V2_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y4V2_PHATC) HSP 1 Score: 179 bits (453), Expect = 6.390e-50 Identity = 97/201 (48.26%), Postives = 128/201 (63.68%), Query Frame = 2 Query: 491 LKSVNARLQGYGLPTVEKPPGGMSPLLEVYGRDTNRETLLVGWNYPSTWIVERPSLDRNSEDGTVATGDYQKGDTAFFFVGS-----KDLLGGSTLSSGDKALVTAVLQKAISQKGDNQYQSFKLKSVREGATAANGQKYYVARFSYELLTGAGFTVDREGCASLTTVGSGVQALVAATTAKRFKKLQPELEEIATSFRVY 1078 +K VNA+L GYGLP V P G++PLLE+YG+ NR +LV +NYP TW+V PS + N EDGTV G+Y KGDTA FF+ S KD+ ++ K L ++I QKGDN YQ+FK+ + T +G+ Y +A F Y+LLTGAGF VDR+G AS+T+ G V+ L AA+TA R+KK + L I SFR Y Sbjct: 102 VKKVNAKLAGYGLPLVSNVPDGLTPLLEIYGKGVNRFPVLVQFNYPVTWVVTTPSNNVNGEDGTVQAGEYNKGDTATFFLYSEPGNIKDV------TTQSKEFFEKALMRSIGQKGDNMYQNFKVTKLEP--TVKDGKPYMIADFKYQLLTGAGFEVDRKGVASITSQGDAVEVLWAASTAIRYKKTEETLRNIVASFRCY 294 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig958.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig958.4.1 >prot_P-wetherbeei_contig958.4.1 ID=prot_P-wetherbeei_contig958.4.1|Name=mRNA_P-wetherbeei_contig958.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=238bp MDATEAGAGAATRREVLAGAAASALTGLLWAPSSAPAASLKSVNARLQGYback to top mRNA from alignment at P-wetherbeei_contig958:4512..6363+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig958.4.1 ID=mRNA_P-wetherbeei_contig958.4.1|Name=mRNA_P-wetherbeei_contig958.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1852bp|location=Sequence derived from alignment at P-wetherbeei_contig958:4512..6363+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig958:4512..6363+ >mRNA_P-wetherbeei_contig958.4.1 ID=mRNA_P-wetherbeei_contig958.4.1|Name=mRNA_P-wetherbeei_contig958.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=714bp|location=Sequence derived from alignment at P-wetherbeei_contig958:4512..6363+ (Phaeothamnion wetherbeei SAG_119_79)back to top |