mRNA_P-wetherbeei_contig9575.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig9575.2.1
Unique NamemRNA_P-wetherbeei_contig9575.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig9575.2.1 vs. uniprot
Match: A0A1D8AZP8_9BACT (Uncharacterized protein n=1 Tax=Lacunisphaera limnophila TaxID=1838286 RepID=A0A1D8AZP8_9BACT)

HSP 1 Score: 61.2 bits (147), Expect = 5.890e-11
Identity = 26/31 (83.87%), Postives = 28/31 (90.32%), Query Frame = 1 
Query:    4 MNVTRIDILTRGLTNRCPNCGGKTLFVPGIL 96
            M VTR+ ILTRGLT+RCPNCGGKTLFVPG L
Sbjct:    1 MRVTRLTILTRGLTHRCPNCGGKTLFVPGKL 31
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BLAST of mRNA_P-wetherbeei_contig9575.2.1 vs. uniprot
Match: A0A3E1EAY0_9BACT (Uncharacterized protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A3E1EAY0_9BACT)

HSP 1 Score: 56.2 bits (134), Expect = 6.080e-9
Identity = 24/31 (77.42%), Postives = 25/31 (80.65%), Query Frame = 1 
Query:    4 MNVTRIDILTRGLTNRCPNCGGKTLFVPGIL 96
            M VTRI I+ RGLT RCPNCGGKTLF PG L
Sbjct:    1 MQVTRIQIVARGLTIRCPNCGGKTLFKPGTL 31
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BLAST of mRNA_P-wetherbeei_contig9575.2.1 vs. uniprot
Match: B1ZQ53_OPITP (Uncharacterized protein n=1 Tax=Opitutus terrae (strain DSM 11246 / JCM 15787 / PB90-1) TaxID=452637 RepID=B1ZQ53_OPITP)

HSP 1 Score: 56.2 bits (134), Expect = 6.320e-9
Identity = 24/31 (77.42%), Postives = 25/31 (80.65%), Query Frame = 1 
Query:    4 MNVTRIDILTRGLTNRCPNCGGKTLFVPGIL 96
            M VTRI I+ RGLTNRCPNCG  TLFVPG L
Sbjct:    1 MKVTRIQIVARGLTNRCPNCGDHTLFVPGKL 31
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BLAST of mRNA_P-wetherbeei_contig9575.2.1 vs. uniprot
Match: A0A139SQV0_9BACT (Uncharacterized protein n=1 Tax=Cephaloticoccus capnophilus TaxID=1548208 RepID=A0A139SQV0_9BACT)

HSP 1 Score: 52.8 bits (125), Expect = 1.350e-7
Identity = 23/31 (74.19%), Postives = 24/31 (77.42%), Query Frame = 1 
Query:    4 MNVTRIDILTRGLTNRCPNCGGKTLFVPGIL 96
            M V+R  IL RGLTNRCPNCGGKTLF  G L
Sbjct:    1 MKVSRQQILIRGLTNRCPNCGGKTLFKKGSL 31
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BLAST of mRNA_P-wetherbeei_contig9575.2.1 vs. uniprot
Match: A0A2A2RGW4_9BACT (DUF983 domain-containing protein n=1 Tax=Opitutae bacterium Tous-C8FEB TaxID=1982323 RepID=A0A2A2RGW4_9BACT)

HSP 1 Score: 52.4 bits (124), Expect = 2.000e-7
Identity = 20/29 (68.97%), Postives = 24/29 (82.76%), Query Frame = 1 
Query:    1 FMNVTRIDILTRGLTNRCPNCGGKTLFVP 87
             + VTR+ I+TRGL NRCPNCGG+TLF P
Sbjct:    1 MLKVTRLQIVTRGLANRCPNCGGRTLFRP 29
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BLAST of mRNA_P-wetherbeei_contig9575.2.1 vs. uniprot
Match: A0A1H1M3I8_9BACT (Uncharacterized conserved protein, DUF983 family n=1 Tax=Opitutus sp. GAS368 TaxID=1882749 RepID=A0A1H1M3I8_9BACT)

HSP 1 Score: 50.8 bits (120), Expect = 7.490e-7
Identity = 21/31 (67.74%), Postives = 23/31 (74.19%), Query Frame = 1 
Query:    4 MNVTRIDILTRGLTNRCPNCGGKTLFVPGIL 96
            M VTR  I+ RGL NRCPNCGG+TLF  G L
Sbjct:    1 MQVTRGQIIARGLANRCPNCGGRTLFKTGTL 31
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BLAST of mRNA_P-wetherbeei_contig9575.2.1 vs. uniprot
Match: UPI001C805B14 (DUF983 domain-containing protein n=1 Tax=Opitutus sp. WL0086 TaxID=2866162 RepID=UPI001C805B14)

HSP 1 Score: 50.8 bits (120), Expect = 7.490e-7
Identity = 21/29 (72.41%), Postives = 23/29 (79.31%), Query Frame = 1 
Query:    4 MNVTRIDILTRGLTNRCPNCGGKTLFVPG 90
            M VTR  I+ RGLTNRCPNCGG+TLF  G
Sbjct:    1 MQVTRGQIIARGLTNRCPNCGGRTLFQEG 29
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BLAST of mRNA_P-wetherbeei_contig9575.2.1 vs. uniprot
Match: A0A2E4IYM4_9BACT (DUF983 domain-containing protein n=1 Tax=Opitutaceae bacterium TaxID=2006848 RepID=A0A2E4IYM4_9BACT)

HSP 1 Score: 50.4 bits (119), Expect = 1.060e-6
Identity = 21/31 (67.74%), Postives = 22/31 (70.97%), Query Frame = 1 
Query:    4 MNVTRIDILTRGLTNRCPNCGGKTLFVPGIL 96
            M VTRI  + RGLTNRCPNCGG TLF  G  
Sbjct:    1 MKVTRIQTVIRGLTNRCPNCGGSTLFWEGTF 31
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BLAST of mRNA_P-wetherbeei_contig9575.2.1 vs. uniprot
Match: A0A290QDZ0_9BACT (DUF983 domain-containing protein n=1 Tax=Nibricoccus aquaticus TaxID=2576891 RepID=A0A290QDZ0_9BACT)

HSP 1 Score: 50.1 bits (118), Expect = 1.490e-6
Identity = 22/31 (70.97%), Postives = 23/31 (74.19%), Query Frame = 1 
Query:    4 MNVTRIDILTRGLTNRCPNCGGKTLFVPGIL 96
            MNVTR  I  RGLTN CPNCGG+TLF  G L
Sbjct:    1 MNVTRGKIAARGLTNCCPNCGGRTLFKEGSL 31
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BLAST of mRNA_P-wetherbeei_contig9575.2.1 vs. uniprot
Match: A0A178IFT2_9BACT (Uncharacterized protein n=1 Tax=Opitutaceae bacterium TSB47 TaxID=1184151 RepID=A0A178IFT2_9BACT)

HSP 1 Score: 50.1 bits (118), Expect = 1.490e-6
Identity = 21/29 (72.41%), Postives = 23/29 (79.31%), Query Frame = 1 
Query:    4 MNVTRIDILTRGLTNRCPNCGGKTLFVPG 90
            M VTR  +L RGLTNRCPNCGG+TLF  G
Sbjct:    1 MRVTRGGLLARGLTNRCPNCGGRTLFRAG 29
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9575.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A1D8AZP8_9BACT5.890e-1183.87Uncharacterized protein n=1 Tax=Lacunisphaera limn... [more]
A0A3E1EAY0_9BACT6.080e-977.42Uncharacterized protein n=1 Tax=Verrucomicrobia ba... [more]
B1ZQ53_OPITP6.320e-977.42Uncharacterized protein n=1 Tax=Opitutus terrae (s... [more]
A0A139SQV0_9BACT1.350e-774.19Uncharacterized protein n=1 Tax=Cephaloticoccus ca... [more]
A0A2A2RGW4_9BACT2.000e-768.97DUF983 domain-containing protein n=1 Tax=Opitutae ... [more]
A0A1H1M3I8_9BACT7.490e-767.74Uncharacterized conserved protein, DUF983 family n... [more]
UPI001C805B147.490e-772.41DUF983 domain-containing protein n=1 Tax=Opitutus ... [more]
A0A2E4IYM4_9BACT1.060e-667.74DUF983 domain-containing protein n=1 Tax=Opitutace... [more]
A0A290QDZ0_9BACT1.490e-670.97DUF983 domain-containing protein n=1 Tax=Nibricocc... [more]
A0A178IFT2_9BACT1.490e-672.41Uncharacterized protein n=1 Tax=Opitutaceae bacter... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9575contigP-wetherbeei_contig9575:2306..2410 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog452637.Oter_4503
PFAMsDUF983
Model size105
Max annot lvl414999|Opitutae
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Evalue9.9e-10
EggNOG OGsCOG5349@1|root,COG5349@2|Bacteria,46XVT@74201|Verrucomicrobia,3K8ER@414999|Opitutae
DescriptionProtein of unknown function (DUF983)
Cds size102
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187099.679685-CDS-P-wetherbeei_contig9575:2305..24071683187099.679685-CDS-P-wetherbeei_contig9575:2305..2407Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9575 2306..2407 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187099.6912496-UTR-P-wetherbeei_contig9575:2407..24101683187099.6912496-UTR-P-wetherbeei_contig9575:2407..2410Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig9575 2408..2410 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9575.2.1prot_P-wetherbeei_contig9575.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig9575 2306..2407 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig9575.2.1

>prot_P-wetherbeei_contig9575.2.1 ID=prot_P-wetherbeei_contig9575.2.1|Name=mRNA_P-wetherbeei_contig9575.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=34bp
MNVTRIDILTRGLTNRCPNCGGKTLFVPGILGP*
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mRNA from alignment at P-wetherbeei_contig9575:2306..2410-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig9575.2.1 ID=mRNA_P-wetherbeei_contig9575.2.1|Name=mRNA_P-wetherbeei_contig9575.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=105bp|location=Sequence derived from alignment at P-wetherbeei_contig9575:2306..2410- (Phaeothamnion wetherbeei SAG_119_79)
TTCATGAACGTCACCCGCATCGACATCCTCACCCGTGGTCTGACCAATCG
CTGCCCCAACTGTGGCGGCAAGACGCTCTTTGTGCCGGGTATACTCGGCC
CATAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig9575:2306..2410-

>mRNA_P-wetherbeei_contig9575.2.1 ID=mRNA_P-wetherbeei_contig9575.2.1|Name=mRNA_P-wetherbeei_contig9575.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=102bp|location=Sequence derived from alignment at P-wetherbeei_contig9575:2306..2410- (Phaeothamnion wetherbeei SAG_119_79)
ATGAACGTCACCCGCATCGACATCCTCACCCGTGGTCTGACCAATCGCTG
CCCCAACTGTGGCGGCAAGACGCTCTTTGTGCCGGGTATACTCGGCCCAT
AG
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