mRNA_P-wetherbeei_contig9564.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig9564.1.2
Unique NamemRNA_P-wetherbeei_contig9564.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig9564.1.2 vs. uniprot
Match: D7FI57_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI57_ECTSI)

HSP 1 Score: 247 bits (630), Expect = 5.880e-70
Identity = 172/439 (39.18%), Postives = 224/439 (51.03%), Query Frame = 1
Query:    1 LQVRRAADECAKALARALLQPAALTDMLLPVLRGEEACCALLLCLLHVSAGAGDQGASGRAVGAFAGR--LAKICSCDGDGGKMEAWVGNGDG-----EASGGQRLLCHHFNALLSAILGGRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSGPMNTAAAVADERWRKGSTQLAAFDQLCRLAPLGTAAHLDLMVPIILSQLRAPAETDPEVRLAVLTLLGSVMAAPEVTAERLSPHAAALVADALAPNLVWRAGVAAATVRKATVAALYTMLQGGRLLVPALAETAPQQLLPVLKTNIEDQDPTTRHLSCLCLARCLEMLPLALGEAPVREIYPELLKRLDDSSDDVRKAACRALTALFAASPPENVRGTVLEYSTEQLLVXXXXXXXXXXXXXXXXXXXAAAIDPGMVRKKALAARPSHRDPRHCDRLLTQIS 1296
            ++VR+A DECA A+  A +   A+TD+LLPVLRGE     LL  LL + AG+      G      A +  + +I S      ++ A  G+           G Q L   HF  LL+ ++G  A                               +           D  W KGS +   F+ L R AP     HL  ++PI    L   A  +PEVRL++L LL  V+    VT E L PHA  L+ + + PN VWRAG+ AA VRK  +A LYT L+G ++ V A+  +A +Q+LPVLKTN+ED + TTR ++CL L     M+P ALG+ PVR IYPELLKRLDDS+D VR A C  + A   A+ P+NVRGTVL+Y  EQLLV                   AAAIDP  V K A  AR SHR P +CDRL+   S
Sbjct:  485 VEVRQAVDECAAAIGEAAIDLGAVTDILLPVLRGE-----LLRALLWLLAGSEAGAGDGXXXXXXAAKEEVLEIAS------QLAAHQGSXXXXXXXRREEGAQGLFARHFTDLLACVVGDAAAVGET--------------------------AGAAXXXXXXXXDAGWGKGSRRRGGFEALLRSAPRAVGEHLGEVMPIFRGLLH-DATREPEVRLSMLALLECVVKHDGVTEESLRPHAETLLKEMVLPNAVWRAGLVAAPVRKVAIAVLYTALRGNKIGVEAVYASA-EQVLPVLKTNLEDHEATTRQITCLSLEMMFRMIPGALGDEPVRLIYPELLKRLDDSNDTVRMAVCGTIAAFLRATAPQNVRGTVLQYMAEQLLVHLDDQDEAMQRAVFAVMEVAAAIDPKTVEKLASEARSSHRTPSYCDRLVALCS 884          
BLAST of mRNA_P-wetherbeei_contig9564.1.2 vs. uniprot
Match: A0A6H5KK84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK84_9PHAE)

HSP 1 Score: 224 bits (572), Expect = 7.100e-63
Identity = 128/260 (49.23%), Postives = 161/260 (61.92%), Query Frame = 1
Query:  517 FDQLCRLAPLGTAAHLDLMVPIILSQLRAPAETDPEVRLAVLTLLGSVMAAPEVTAERLSPHAAALVADALAPNLVWRAGVAAATVRKATVAALYTMLQGGRLLVPALAETAPQQLLPVLKTNIEDQDPTTRHLSCLCLARCLEMLPLALGEAPVREIYPELLKRLDDSSDDVRKAACRALTALFAASPPENVRGTVLEYSTEQLLVXXXXXXXXXXXXXXXXXXXAAAIDPGMVRKKALAARPSHRDPRHCDRLLTQIS 1296
            F+ L R AP     HL  ++PI    L   A  +PEVRL++L LL  V+    VT E L PHA  ++ + + PN VWRAG+ AATVRK  +A LYT L+G ++ V A+  +A +Q+LPVLKTN+ED + TTR ++CL L     M+P ALG+ PVR IYPELLKRLDDS+D VR A C    A F A+PP+NVRGTVL+Y +EQLLV                   AAAIDP  V K A  AR SHR P +CDRL+   S
Sbjct:  434 FEALLRSAPRAVGEHLGEVMPIFRGLLH-DATREPEVRLSMLALLECVVKHDGVTEESLRPHAETMLKEMVLPNAVWRAGLVAATVRKVAIAVLYTALRGNKIGVEAVYASA-EQVLPVLKTNLEDHEATTRQMTCLSLEMMFRMIPGALGDEPVRLIYPELLKRLDDSNDTVRMAVCGTTAAFFRATPPQNVRGTVLQYMSEQLLVHLDDQDEAMQRAVFAVMEVAAAIDPKTVEKLASEARSSHRTPSYCDRLVALCS 691          
BLAST of mRNA_P-wetherbeei_contig9564.1.2 vs. uniprot
Match: W4FUF0_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FUF0_9STRA)

HSP 1 Score: 196 bits (497), Expect = 1.290e-51
Identity = 114/266 (42.86%), Postives = 156/266 (58.65%), Query Frame = 1
Query:  487 WRKGSTQLAAFDQLCRLAPLGTAAHLDLMVPIILSQLRAPAETDPEVRLAVLTLLGSVMAAPEVTAERLSPHAAALVADALAPNLVWRAGVAAATVRKATVAALYTMLQGGRLLVPALAETAPQQLLPVLKTNIEDQDPTTRHLSCLCLARCLEMLPLALGEAPVREIYPELLKRLDDSSDDVRKAACRALTALFAASPPENVRGTVLEYSTEQLLVXXXXXXXXXXXXXXXXXXXAAAIDPGMVRKKALAARPSHRDPRHCDRLL 1284
            W K S+    FD LCR     TA  + ++VPI+L+ L AP+  +P+VRL+ L LL +++   ++ A+   P AA+L+   + PN+VW++G  AATVRK  +A  YT+L+ G    PAL E APQ +LPVLK+ ++D D  TR L CL L      LP ALGE PV ++Y E+LKRLDDS+D VRKAAC        A+P  + RGT++EYS + L V                     A+DP M+ KKA   R  HR P +CD+LL
Sbjct:  569 WTKTSSSRVLFDSLCRRGGRATADQMHVVVPIVLAHL-APSN-EPDVRLSFLALLETLLG-NDLMAQAFQPFAASLLVKGITPNIVWQSGKVAATVRKVAMACTYTLLRQGLANQPALFEAAPQ-MLPVLKSCLDDTDAKTRQLVCLSLQHLFVALPNALGEEPVSQLYHEILKRLDDSNDLVRKAACATYITFLRAAPRSHFRGTIIEYSMDALFVHLDDSDPDVQAAVYQVLKETFAVDPDMLTKKATDHRSRHRSPYYCDKLL 830          
BLAST of mRNA_P-wetherbeei_contig9564.1.2 vs. uniprot
Match: A0A024U661_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U661_9STRA)

HSP 1 Score: 193 bits (490), Expect = 1.170e-50
Identity = 110/268 (41.04%), Postives = 153/268 (57.09%), Query Frame = 1
Query:  481 ERWRKGSTQLAAFDQLCRLAPLGTAAHLDLMVPIILSQLRAPAETDPEVRLAVLTLLGSVMAAPEVTAERLSPHAAALVADALAPNLVWRAGVAAATVRKATVAALYTMLQGGRLLVPALAETAPQQLLPVLKTNIEDQDPTTRHLSCLCLARCLEMLPLALGEAPVREIYPELLKRLDDSSDDVRKAACRALTALFAASPPENVRGTVLEYSTEQLLVXXXXXXXXXXXXXXXXXXXAAAIDPGMVRKKALAARPSHRDPRHCDRLL 1284
            E W K ++    FD LCR     TA  + ++VPI+L+ L      DP+VRL+ L LL +++    + A+   P AA+L+   + PN+VW++G  AATVRK  +A  YT+L+ G    PAL E APQ +LPVLK+ ++D D  TR L CL L      LP ALGE PV ++Y E+LKRLDDS+D VRKAAC        A+P  + RGT+++Y+ + L V                     A+DP ++ KKA   R  HR P +CD+LL
Sbjct:  566 ETWSKAASSRVLFDSLCRRGGRATADQMHIVVPIVLTHLTP--SNDPDVRLSFLALLETLLG-NTLMAQSFQPFAASLLVKGITPNIVWQSGKVAATVRKVAMACTYTLLRQGLANQPALFEAAPQ-MLPVLKSCLDDSDAKTRQLVCLSLQHLFVALPNALGEEPVSQLYHEILKRLDDSNDLVRKAACATYVTFLRAAPRSHFRGTIIDYTMDALFVHLDDPDSDVQAAVFEVLKETFAVDPELLGKKARDHRSRHRSPYYCDKLL 829          
BLAST of mRNA_P-wetherbeei_contig9564.1.2 vs. uniprot
Match: A0A6G0XR12_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XR12_9STRA)

HSP 1 Score: 186 bits (473), Expect = 2.420e-48
Identity = 108/268 (40.30%), Postives = 152/268 (56.72%), Query Frame = 1
Query:  481 ERWRKGSTQLAAFDQLCRLAPLGTAAHLDLMVPIILSQLRAPAETDPEVRLAVLTLLGSVMAAPEVTAERLSPHAAALVADALAPNLVWRAGVAAATVRKATVAALYTMLQGGRLLVPALAETAPQQLLPVLKTNIEDQDPTTRHLSCLCLARCLEMLPLALGEAPVREIYPELLKRLDDSSDDVRKAACRALTALFAASPPENVRGTVLEYSTEQLLVXXXXXXXXXXXXXXXXXXXAAAIDPGMVRKKALAARPSHRDPRHCDRLL 1284
            + W K S+    FD LCR         + L+VPIIL+ L    E  P+VRLA L LL   M   E+ A+   P A++++   + PN+VW++G  AATVRK  +A+ YT+L+ G    PAL E+APQ +LPVLK+ ++D D  TR L CL L      LP ALGE PV ++Y ++LKRLDDS+D VRKAAC        A+P  + RGT+++Y+ + L V                     ++DP ++ KKA   R  HR P +CD+L+
Sbjct:  561 QTWTKASSNRILFDSLCRRGGRACGDQVHLIVPIILAHLDPSKE--PDVRLAFLALL-ETMLGNELIAQSFQPFASSMLVKGITPNIVWQSGKVAATVRKVAMASTYTLLRQGLANQPALFESAPQ-MLPVLKSCLDDTDAKTRQLVCLSLQHLFVALPNALGEEPVSQLYHDILKRLDDSNDLVRKAACATYITFLRAAPRSHFRGTIIDYTMDALFVHLDDPDPEIQAAVFDVLRETFSVDPELLGKKAREHRTRHRSPYYCDQLI 824          
BLAST of mRNA_P-wetherbeei_contig9564.1.2 vs. uniprot
Match: A0A225WPQ1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WPQ1_9STRA)

HSP 1 Score: 185 bits (469), Expect = 1.060e-47
Identity = 110/275 (40.00%), Postives = 152/275 (55.27%), Query Frame = 1
Query:  460 TAAAVADERWRKGSTQLAAFDQLCRLAPLGTAAHLDLMVPIILSQLRAPAETDPEVRLAVLTLLGSVMAAPEVTAERLSPHAAALVADALAPNLVWRAGVAAATVRKATVAALYTMLQGGRLLVPALAETAPQQLLPVLKTNIEDQDPTTRHLSCLCLARCLEMLPLALGEAPVREIYPELLKRLDDSSDDVRKAACRALTALFAASPPENVRGTVLEYSTEQLLVXXXXXXXXXXXXXXXXXXXAAAIDPGMVRKKALAARPSHRDPRHCDRLL 1284
            T  + A   W K +     FD LCR        +L+ +VP+ L  L  PA+ D +VRLA L LL +++    ++ +   P +  L+  A+ PN+VWR G  AAT+RK  VA  YT+L+      P L ETAPQ +LPVLK++++D D  TR L CL L      LP  LGE PV ++Y E+LKRLDDS+D VRKAAC+  T    A+P E+ RGT+++Y+ + L V                     AID   + KKA   R  H+ PR+CD+LL
Sbjct:  585 TLPSDATTSWEKSNPSRVLFDSLCRRGRAACGENLNRIVPVFLVHLE-PAQ-DADVRLAFLALLETMLGTDAIS-QAFKPFSVGLLQKAIIPNIVWRGGRVAATIRKVAVACAYTLLRQDIADHPCLFETAPQ-MLPVLKSSMDDNDAKTRQLVCLALQYLFVALPGCLGEEPVHQLYAEILKRLDDSNDTVRKAACQTFTTFLRAAPKEHFRGTIIDYTLDCLFVHLDDSEPDIQEAVFEVLKGTVAIDAPRLAKKAEENRIRHQSPRYCDQLL 855          
BLAST of mRNA_P-wetherbeei_contig9564.1.2 vs. uniprot
Match: W2PQ39_PHYPN (Uncharacterized protein n=43 Tax=Phytophthora TaxID=4783 RepID=W2PQ39_PHYPN)

HSP 1 Score: 184 bits (468), Expect = 1.600e-47
Identity = 108/267 (40.45%), Postives = 148/267 (55.43%), Query Frame = 1
Query:  484 RWRKGSTQLAAFDQLCRLAPLGTAAHLDLMVPIILSQLRAPAETDPEVRLAVLTLLGSVMAAPEVTAERLSPHAAALVADALAPNLVWRAGVAAATVRKATVAALYTMLQGGRLLVPALAETAPQQLLPVLKTNIEDQDPTTRHLSCLCLARCLEMLPLALGEAPVREIYPELLKRLDDSSDDVRKAACRALTALFAASPPENVRGTVLEYSTEQLLVXXXXXXXXXXXXXXXXXXXAAAIDPGMVRKKALAARPSHRDPRHCDRLL 1284
            RW+K       FD +CR        +L  +VPIIL  L    + D +VRLA L LL +++    ++ +   P + AL+  A+ PN+VWR G  AAT+RK  VA  YT+L+ G      L ETAPQ +LPVLK++++D D  TR L CL L      LP  LGE PV ++Y E+LKRLDDS+D VRKAAC+  T    A+P E+ RGT+++Y+ + L V                      ID   + KKA   R  H+ PR+CD+LL
Sbjct:  617 RWQKCDPSRVLFDSICRRGGAACGENLGKIVPIILIHLEP--DQDADVRLASLALLETMLGTDAIS-QAFKPFSVALLQKAIIPNIVWRGGRVAATIRKVAVACAYTLLRQGIAGQQCLFETAPQ-MLPVLKSSMDDSDAKTRQLVCLALQYLFVALPGCLGEEPVHQLYAEILKRLDDSNDTVRKAACQTFTTFLKAAPKEHFRGTIIDYTMDCLFVHLDDSEPDIQEAVFKVLKETIVIDAPRLAKKAEENRTRHQSPRYCDQLL 879          
BLAST of mRNA_P-wetherbeei_contig9564.1.2 vs. uniprot
Match: A0A3M6V7P9_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V7P9_9STRA)

HSP 1 Score: 184 bits (467), Expect = 2.050e-47
Identity = 109/270 (40.37%), Postives = 149/270 (55.19%), Query Frame = 1
Query:  487 WRKGSTQLAAFDQLCRLAPLGTAAHLDLMVPIILSQLRAPAETDPEVRLAVLTLLGSVMAAPEVTAERLSPHAAALVADALAPNLVWRAGVAAATVRKATVAALYTMLQGGRLLVPALAETAPQQLLPVLKTNIEDQDPTTRHLSCLCLARCLEMLPLALGEAPVREIYPELLKRLDDSSDDVRKAACRALTALFAASPPENVRGTVLEYSTEQLLVXXXXXXXXXXXXXXXXXXXAAAIDPGMVRKKALAARPSHRDPRHCDRLLTQIS 1296
            W+K +     FD LCR   +  A +LD ++P+ L  L  P++ D ++RLA LTLL +++    +T + L   + AL+  A+ PN+VW  G  AAT+RKA VA  YT L  G    P L ETAPQ +LPVLK +I+D D  TR L CL L      LP  LGE PV ++Y E+LKRLDDS+D VRKAAC+  +    A P E+ +G ++ Y+ + L V                     AID   + KKA   R  HR P +CD+L+   S
Sbjct:  602 WQKSNPTRVLFDSLCRRGGVACAKNLDKIIPVFLVHLE-PSQ-DADIRLAFLTLLETMLGMDTIT-QALKMFSVALLQKAIIPNMVWHEGRMAATIRKAAVACAYTCLSQGIADQPCLFETAPQ-MLPVLKASIDDSDAKTRQLVCLALQYLFVALPSCLGEEPVHQLYSEILKRLDDSNDTVRKAACQTFSTFLKAPPKEHFQGPIINYTLDCLFVHLDDPEPEIQEAVYNVLRETVAIDAPQLAKKAEENRSRHRSPHYCDQLVVLAS 867          
BLAST of mRNA_P-wetherbeei_contig9564.1.2 vs. uniprot
Match: A0A485L932_9STRA (Aste57867_17652 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L932_9STRA)

HSP 1 Score: 184 bits (466), Expect = 2.330e-47
Identity = 108/266 (40.60%), Postives = 145/266 (54.51%), Query Frame = 1
Query:  487 WRKGSTQLAAFDQLCRLAPLGTAAHLDLMVPIILSQLRAPAETDPEVRLAVLTLLGSVMAAPEVTAERLSPHAAALVADALAPNLVWRAGVAAATVRKATVAALYTMLQGGRLLVPALAETAPQQLLPVLKTNIEDQDPTTRHLSCLCLARCLEMLPLALGEAPVREIYPELLKRLDDSSDDVRKAACRALTALFAASPPENVRGTVLEYSTEQLLVXXXXXXXXXXXXXXXXXXXAAAIDPGMVRKKALAARPSHRDPRHCDRLL 1284
            W K       FD LCR      A  + L+VPI+L+ L    E  P+VRL+ L LL   M   +V A+   P AA L+   + PN+VW++G  AATVRK  +A  YT+L+ G    PAL E APQ +LPVLK+ ++D D  TR L CL L      LP AL E PV ++Y ++LKRLDDS+D VRKAAC        A+P  + RGT+++Y+ + L V                     A+D  ++ KKA   R  HR P +CD+LL
Sbjct:  574 WTKNDASRVHFDSLCRRGGRACADQMHLLVPIVLAHLATINE--PDVRLSFLALL-ETMLGNDVMAQAFQPFAATLLVKGITPNIVWQSGKVAATVRKVAIACTYTLLRQGLANQPALFEAAPQ-MLPVLKSCLDDSDAKTRQLVCLSLQHLFVALPNALSEEPVSQLYHDILKRLDDSNDVVRKAACATFITFLHAAPRTHFRGTIIDYTMDALFVHLDDSDPDIQAAVFDVLKETFAVDADLLAKKARDHRTRHRSPYYCDKLL 835          
BLAST of mRNA_P-wetherbeei_contig9564.1.2 vs. uniprot
Match: A0A5D6XR59_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XR59_9STRA)

HSP 1 Score: 184 bits (466), Expect = 2.540e-47
Identity = 106/274 (38.69%), Postives = 149/274 (54.38%), Query Frame = 1
Query:  475 ADERWRKGSTQLAAFDQLCRLAPLGTAAHLDLMVPIILSQLRAPAETDPEVRLAVLTLLGSVMAAPEVTAERLSPHAAALVADALAPNLVWRAGVAAATVRKATVAALYTMLQGGRLLVPALAETAPQQLLPVLKTNIEDQDPTTRHLSCLCLARCLEMLPLALGEAPVREIYPELLKRLDDSSDDVRKAACRALTALFAASPPENVRGTVLEYSTEQLLVXXXXXXXXXXXXXXXXXXXAAAIDPGMVRKKALAARPSHRDPRHCDRLLTQIS 1296
            A   W+K       FD LCR        +LD +VP +L  L A    D +VRLA L LL +++    +  +   P +  L+ + + PN+VW+ G  AAT+RK  VA +YT+L+ G    P L ETAP+ +LPVLK++++D D  TR L CL L      LP  LGE PV ++Y E+LKRLDDS+D VRKAAC+  +    A+P E+ RGT+++YS + L V                   A  +D  +V KKA   R  H+ P  CD +L  I+
Sbjct:  582 AASSWKKSEPSRVLFDSLCRRGGAACGENLDRLVPALLVHLEA--SRDADVRLAFLALLETMLGTDSIF-QSFRPFSTPLLLNGIIPNIVWQGGRVAATIRKVAVACVYTLLRQGLADQPCLFETAPK-MLPVLKSSMDDSDAKTRQLVCLALQYLFVALPGCLGEEPVHQLYAEILKRLDDSNDTVRKAACQTFSTFLRAAPKEHFRGTIIDYSLDCLFVHLDDSDASIQAAVLDVLKAAIEVDKPLVAKKAQENRSRHQSPTLCDEILALIA 851          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9564.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FI57_ECTSI5.880e-7039.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KK84_9PHAE7.100e-6349.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W4FUF0_9STRA1.290e-5142.86Uncharacterized protein n=9 Tax=Aphanomyces astaci... [more]
A0A024U661_9STRA1.170e-5041.04Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A6G0XR12_9STRA2.420e-4840.30Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A225WPQ1_9STRA1.060e-4740.00Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
W2PQ39_PHYPN1.600e-4740.45Uncharacterized protein n=43 Tax=Phytophthora TaxI... [more]
A0A3M6V7P9_9STRA2.050e-4740.37Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
A0A485L932_9STRA2.330e-4740.60Aste57867_17652 protein n=1 Tax=Aphanomyces stella... [more]
A0A5D6XR59_9STRA2.540e-4738.69Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9564contigP-wetherbeei_contig9564:314..2427 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FI57
Preferred nameHEATR2
PFAMsHEAT,HEAT_2
Model size1299
Max annot lvl2759|Eukaryota
KEGG koko:K19759
Hectar predicted targeting categoryother localisation
GOsGO:0000226,GO:0001539,GO:0001578,GO:0003008,GO:0003341,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007600,GO:0007605,GO:0007610,GO:0007626,GO:0008150,GO:0008344,GO:0009987,GO:0016043,GO:0022607,GO:0030030,GO:0030031,GO:0030317,GO:0030534,GO:0032501,GO:0034622,GO:0035082,GO:0036158,GO:0036159,GO:0040011,GO:0043933,GO:0044085,GO:0044424,GO:0044464,GO:0044782,GO:0045505,GO:0048870,GO:0050877,GO:0050954,GO:0051179,GO:0051674,GO:0060271,GO:0060285,GO:0060294,GO:0065003,GO:0070286,GO:0070925,GO:0071840,GO:0097722,GO:0120031,GO:0120036
Exons3
Evalue9.64e-71
EggNOG OGs2CMTW@1|root,2QRXT@2759|Eukaryota
Ec32 ortholog descriptionArmadillo-type fold
Ec32 orthologEc-10_003630.1
Descriptioninner dynein arm assembly
Cds size1299
COG categoryS
BRITEko00000,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187099.1772323-CDS-P-wetherbeei_contig9564:313..7541683187099.1772323-CDS-P-wetherbeei_contig9564:313..754Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9564 314..754 -
1683187099.1926854-CDS-P-wetherbeei_contig9564:1007..17601683187099.1926854-CDS-P-wetherbeei_contig9564:1007..1760Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9564 1008..1760 -
1683187099.203364-CDS-P-wetherbeei_contig9564:2322..24271683187099.203364-CDS-P-wetherbeei_contig9564:2322..2427Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9564 2323..2427 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9564.1.2prot_P-wetherbeei_contig9564.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig9564 314..2427 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig9564.1.2

>prot_P-wetherbeei_contig9564.1.2 ID=prot_P-wetherbeei_contig9564.1.2|Name=mRNA_P-wetherbeei_contig9564.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=433bp
LQVRRAADECAKALARALLQPAALTDMLLPVLRGEEACCALLLCLLHVSA
GAGDQGASGRAVGAFAGRLAKICSCDGDGGKMEAWVGNGDGEASGGQRLL
CHHFNALLSAILGGRAAAGRSMAAGGSSNSGNDKTAATAAASTSAAPSSG
PMNTAAAVADERWRKGSTQLAAFDQLCRLAPLGTAAHLDLMVPIILSQLR
APAETDPEVRLAVLTLLGSVMAAPEVTAERLSPHAAALVADALAPNLVWR
AGVAAATVRKATVAALYTMLQGGRLLVPALAETAPQQLLPVLKTNIEDQD
PTTRHLSCLCLARCLEMLPLALGEAPVREIYPELLKRLDDSSDDVRKAAC
RALTALFAASPPENVRGTVLEYSTEQLLVHLDDQDGDIQESALAVLAAAA
AIDPGMVRKKALAARPSHRDPRHCDRLLTQIS*
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mRNA from alignment at P-wetherbeei_contig9564:314..2427-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig9564.1.2 ID=mRNA_P-wetherbeei_contig9564.1.2|Name=mRNA_P-wetherbeei_contig9564.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2114bp|location=Sequence derived from alignment at P-wetherbeei_contig9564:314..2427- (Phaeothamnion wetherbeei SAG_119_79)
CTGCAGGTACGGAGGGCGGCAGACGAGTGCGCCAAGGCCCTGGCCCGTGC GCTGCTGCAGCCGGCCGCCTTGACGGACATGCTGTTGCCCGTCCTGCGGG GCGAGGTGTCGGGCCAGGCCACAAACCAGCACGTTACACAGGTAAAGCAA CGCAAGAGCAGGGAATGGGAGTGGGGAAGCGACCTCCACTGCTACCGCGG AGGTGTGGATGTGTTGTACTCTGTATTCAGGGCAGGATTCCAGCTTGCGA AGGGCTTGTACTACTACTTTCCTGGCGCTGGCTTTAATTTTGCTGCCTAT GCTTGTGCCTCGGACCACCCGTTACCTCCACACTCCATCCACTACTTCCA ACATTTTGACCTCGTCCCATTCCTTCATCTGCCGCGGGACATGTGAACTG CAGTCGTTGCTGGTGCTGCAGCCTTTTCTCGCCGAGTGCGCCGCACTCGG CAAGCTGGCTCCGCTGGCCAGAAGCATCTGCCTTGCGTTGGCGGGCACCG CCGTCCTCTCAGCGGAACCCGACGGGGACCTACTAGCCGCCTGCTTCGGT GTCTGCGATGCCATCGTTGGAGGCGCCGAAGCGGTGGCTGGAGCGGGAGC GGTTAGCGCATCGACGGCGGTAGGGGCGGCGGCAGCCGCGGCAATGCGGC AGGAGCTGAGCGACGAGGAGGCATGCTGCGCGCTCTTGCTGTGTTTGCTG CACGTCTCGGCAGGCGCCGGGGATCAGGGCGCCAGCGGACGGGCGGTCGG CGCCTTCGCCGGCCGCCTCGCCAAGATCTGCTCGTGCGACGGCGATGGCG GTAAAATGGAGGCCTGGGTCGGCAATGGCGATGGCGAGGCCAGTGGCGGG CAGAGGTTGCTGTGCCACCACTTTAACGCGCTCCTCTCGGCGATTCTCGG AGGCCGCGCCGCCGCCGGCCGGAGCATGGCCGCTGGCGGTAGCAGCAATA GCGGTAACGACAAAACTGCCGCCACCGCCGCCGCCTCCACCTCCGCTGCG CCTTCCAGCGGTCCCATGAATACCGCCGCCGCCGTCGCGGACGAGCGGTG GCGCAAGGGGTCGACGCAGCTGGCAGCGTTCGACCAGCTCTGTCGGCTGG CGCCCCTCGGTACCGCCGCCCACCTCGACCTCATGGTGCCGATTATTCTG TCGCAGCTGCGCGCGCCGGCCGAGACCGACCCCGAGGTGCGATTGGCCGT GCTGACGCTGCTGGGCAGCGTCATGGCGGCACCGGAGGTGACGGCGGAGC GGTTGTCGCCGCACGCGGCGGCGCTTGTGGCGGATGCGCTGGCGCCCAAC CTGGTGTGGCGGGCGGGCGTGGCGGCGGCGACGGTGCGCAAGGCGACGGT GGCGGCGCTCTACACCATGCTGCAGGGCGGCAGACTGCTGGTGCCGGCGC TGGCCGAAACCGCGCCACAGGTGAATGCGGGGCCCCGTCGATGGGTTCGG TTTTTCTCCTATCTTCGATCGGGTTCCTCGCAATTACTGTTGGCGCGCTG CGGTCCCGTCCTTCAATTTTCATGTGCATTCGGAGCGCGCGGGTGTACTC TCTGGTGCCTGGCTGGCTGGCTAAGAAATGCTTGCTAATGAGAGCTTCTT TGCGTAGGGTTGTAACTCGTTTCACTTGCCCGGTCGCTCCACCTACGTGC TCCGTCTTCCCCATTCCAAAAAGCAGCTGTTGCCCGTGCTGAAGACCAAC ATCGAGGACCAGGACCCGACGACGCGGCACCTCTCCTGCCTCTGCCTCGC CCGCTGCCTCGAGATGCTGCCACTGGCGCTGGGCGAGGCGCCGGTCCGTG AAATCTACCCGGAACTTCTGAAGCGGCTCGATGACAGCAGCGACGACGTG CGCAAGGCGGCCTGTCGGGCGCTGACGGCACTCTTCGCGGCGTCGCCGCC GGAGAACGTGCGGGGAACGGTGCTGGAGTATTCGACAGAGCAACTGCTGG TGCACCTGGACGACCAGGATGGAGACATCCAGGAGAGCGCGCTGGCGGTG CTGGCGGCGGCGGCGGCGATCGACCCGGGGATGGTGCGGAAGAAGGCGCT GGCGGCGCGGCCCAGCCACCGGGACCCGCGGCACTGCGATCGCCTCCTGA CGCAAATAAGCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig9564:314..2427-

>mRNA_P-wetherbeei_contig9564.1.2 ID=mRNA_P-wetherbeei_contig9564.1.2|Name=mRNA_P-wetherbeei_contig9564.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1299bp|location=Sequence derived from alignment at P-wetherbeei_contig9564:314..2427- (Phaeothamnion wetherbeei SAG_119_79)
CTGCAGGTACGGAGGGCGGCAGACGAGTGCGCCAAGGCCCTGGCCCGTGC
GCTGCTGCAGCCGGCCGCCTTGACGGACATGCTGTTGCCCGTCCTGCGGG
GCGAGGAGGCATGCTGCGCGCTCTTGCTGTGTTTGCTGCACGTCTCGGCA
GGCGCCGGGGATCAGGGCGCCAGCGGACGGGCGGTCGGCGCCTTCGCCGG
CCGCCTCGCCAAGATCTGCTCGTGCGACGGCGATGGCGGTAAAATGGAGG
CCTGGGTCGGCAATGGCGATGGCGAGGCCAGTGGCGGGCAGAGGTTGCTG
TGCCACCACTTTAACGCGCTCCTCTCGGCGATTCTCGGAGGCCGCGCCGC
CGCCGGCCGGAGCATGGCCGCTGGCGGTAGCAGCAATAGCGGTAACGACA
AAACTGCCGCCACCGCCGCCGCCTCCACCTCCGCTGCGCCTTCCAGCGGT
CCCATGAATACCGCCGCCGCCGTCGCGGACGAGCGGTGGCGCAAGGGGTC
GACGCAGCTGGCAGCGTTCGACCAGCTCTGTCGGCTGGCGCCCCTCGGTA
CCGCCGCCCACCTCGACCTCATGGTGCCGATTATTCTGTCGCAGCTGCGC
GCGCCGGCCGAGACCGACCCCGAGGTGCGATTGGCCGTGCTGACGCTGCT
GGGCAGCGTCATGGCGGCACCGGAGGTGACGGCGGAGCGGTTGTCGCCGC
ACGCGGCGGCGCTTGTGGCGGATGCGCTGGCGCCCAACCTGGTGTGGCGG
GCGGGCGTGGCGGCGGCGACGGTGCGCAAGGCGACGGTGGCGGCGCTCTA
CACCATGCTGCAGGGCGGCAGACTGCTGGTGCCGGCGCTGGCCGAAACCG
CGCCACAGCAGCTGTTGCCCGTGCTGAAGACCAACATCGAGGACCAGGAC
CCGACGACGCGGCACCTCTCCTGCCTCTGCCTCGCCCGCTGCCTCGAGAT
GCTGCCACTGGCGCTGGGCGAGGCGCCGGTCCGTGAAATCTACCCGGAAC
TTCTGAAGCGGCTCGATGACAGCAGCGACGACGTGCGCAAGGCGGCCTGT
CGGGCGCTGACGGCACTCTTCGCGGCGTCGCCGCCGGAGAACGTGCGGGG
AACGGTGCTGGAGTATTCGACAGAGCAACTGCTGGTGCACCTGGACGACC
AGGATGGAGACATCCAGGAGAGCGCGCTGGCGGTGCTGGCGGCGGCGGCG
GCGATCGACCCGGGGATGGTGCGGAAGAAGGCGCTGGCGGCGCGGCCCAG
CCACCGGGACCCGCGGCACTGCGATCGCCTCCTGACGCAAATAAGCTGA
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