mRNA_P-wetherbeei_contig9558.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig9558.1.1
Unique NamemRNA_P-wetherbeei_contig9558.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig9558.1.1 vs. uniprot
Match: A0A0S8AZB3_9PROT (3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Betaproteobacteria bacterium SG8_39 TaxID=1703390 RepID=A0A0S8AZB3_9PROT)

HSP 1 Score: 591 bits (1524), Expect = 5.210e-206
Identity = 299/368 (81.25%), Postives = 332/368 (90.22%), Query Frame = 1
Query:    1 MSDATTYSVHDGIAVIAMNNPPVNGLGSVLRPGIVDGINKAAADPAVKALVIIGSAKAFSGGADIREFNTPKSSMSPTLPEINDIQDKFGKPLVAAIGGFALGGGLELALGCHYRVASPKTLLGLPEVKLGILPGSGGTQRLPRVVGAAEGVKMMTSGNPVPAEKGLQVGLVDEIVQGDLLEGAIAFAKKLVADGKGPRRIRDLTVKVDGDPKAFFEAARAEVGKASRGYPAPLEIVACVEAAVNLPFDEGRKEERRRFLGLVEGSESKALRHMFFAERQTSKIPDVPEDTPVRKIEKAAVIGAGTMGGGITMSLVNVGIPVTIIEMKQDALDRGIATIRKNYASTVSKGRLKQEDMDKRMALITPAL 1104
            MSDA  YSV DGIAVI +NNPPVNGLGSVLRPGI+DGI KA AD AVKALVIIGS KAFSGGADIREFNTPK ++ P+LPEIND QD F KP+VAAIGGFALGGGLELALGCHYRVA+PK+ LGLPEVKLG+LPGSGGTQRLPRVVGAA+ + MMT+GN +PAEK + +GLVDEIVQGDLLEGA+AFAKKLVA GKGPRRIRD+TVKVDG+PKAFFE ARA+VGKASRG+PAPLEIVACVEAAV  PFDEGR EER+RF  LVEG+ESKALRHMFF+ERQT+KIPDVPEDTP R I+ AAVIGAGTMGGGI+MS VN GIPVT+IE +Q ALDRG+ATI+KNYA+TVSKGRL Q DMD RMAL+TP+L
Sbjct:    1 MSDAAAYSVRDGIAVITLNNPPVNGLGSVLRPGIMDGIKKADADAAVKALVIIGSTKAFSGGADIREFNTPKMNVPPSLPEINDAQDAFSKPMVAAIGGFALGGGLELALGCHYRVAAPKSQLGLPEVKLGLLPGSGGTQRLPRVVGAAQAIAMMTTGNAIPAEKAVSLGLVDEIVQGDLLEGALAFAKKLVAGGKGPRRIRDMTVKVDGEPKAFFEKARADVGKASRGFPAPLEIVACVEAAVAKPFDEGRAEERKRFQSLVEGTESKALRHMFFSERQTTKIPDVPEDTPARPIKSAAVIGAGTMGGGISMSFVNAGIPVTVIETQQAALDRGMATIKKNYANTVSKGRLAQADMDTRMALLTPSL 368          
BLAST of mRNA_P-wetherbeei_contig9558.1.1 vs. uniprot
Match: A0A1F4AUF6_9PROT (3-hydroxyacyl-CoA dehydrogenase (Fragment) n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_66_14 TaxID=1797490 RepID=A0A1F4AUF6_9PROT)

HSP 1 Score: 536 bits (1382), Expect = 7.090e-187
Identity = 271/368 (73.64%), Postives = 315/368 (85.60%), Query Frame = 1
Query:    1 MSDATTYSVHDGIAVIAMNNPPVNGLGSVLRPGIVDGINKAAADPAVKALVIIGSAKAFSGGADIREFNTPKSSMSPTLPEINDIQDKFGKPLVAAIGGFALGGGLELALGCHYRVASPKTLLGLPEVKLGILPGSGGTQRLPRVVGAAEGVKMMTSGNPVPAEKGLQVGLVDEIVQGDLLEGAIAFAKKLVADGKGPRRIRDLTVKVDGDPKAFFEAARAEVGKASRGYPAPLEIVACVEAAVNLPFDEGRKEERRRFLGLVEGSESKALRHMFFAERQTSKIPDVPEDTPVRKIEKAAVIGAGTMGGGITMSLVNVGIPVTIIEMKQDALDRGIATIRKNYASTVSKGRLKQEDMDKRMALITPAL 1104
            MS+A +YSV DGIAVI MNNPPVNGLGSVLRPGI+DGI KA ADP V+A+VI GS K FSGGADIREFN+PK+   P+L +I + QD   KPLVAAIGGFA+GGGLELALGCHYRVA+P+T L LPEVKLGILPG+GGTQRLPR+V  A+ ++MMT+GNP+PAE+G+ +GLVDE+ QG+LL+ AIA+AKKLVA+GKGPRRIRDL  K+DGD K FF  AR +V KASR YPAPLEIVAC EAA   PFDEGRK ER RF  LVE +ESKALRHMFFAERQT+KIP VPEDTP R++++AA+IGAGTMGGGI MS VN GI VT+IEMKQ+ LDRG+ATIRKNYA+TV+KGRLKQE MD+ M+LITPAL
Sbjct:    1 MSEAASYSVRDGIAVITMNNPPVNGLGSVLRPGIMDGIRKAEADPQVRAVVIWGSPKVFSGGADIREFNSPKAFAPPSLHDIIEAQDAARKPLVAAIGGFAMGGGLELALGCHYRVAAPRTQLALPEVKLGILPGAGGTQRLPRIVPVAKAIEMMTTGNPIPAEEGVALGLVDELAQGELLDAAIAYAKKLVAEGKGPRRIRDLPAKLDGDAKTFFAQAREQVAKASRNYPAPLEIVACAEAACTRPFDEGRKFERERFAALVETTESKALRHMFFAERQTTKIPGVPEDTPTREVKRAAIIGAGTMGGGIGMSFVNAGIAVTLIEMKQEPLDRGMATIRKNYAATVAKGRLKQEAMDRCMSLITPAL 368          
BLAST of mRNA_P-wetherbeei_contig9558.1.1 vs. uniprot
Match: A0A1F4F1J0_9PROT (3-hydroxyacyl-CoA dehydrogenase n=4 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4F1J0_9PROT)

HSP 1 Score: 540 bits (1390), Expect = 8.370e-186
Identity = 276/368 (75.00%), Postives = 311/368 (84.51%), Query Frame = 1
Query:    1 MSDATTYSVHDGIAVIAMNNPPVNGLGSVLRPGIVDGINKAAADPAVKALVIIGSAKAFSGGADIREFNTPKSSMSPTLPEINDIQDKFGKPLVAAIGGFALGGGLELALGCHYRVASPKTLLGLPEVKLGILPGSGGTQRLPRVVGAAEGVKMMTSGNPVPAEKGLQVGLVDEIVQGDLLEGAIAFAKKLVADGKGPRRIRDLTVKVDGDPKAFFEAARAEVGKASRGYPAPLEIVACVEAAVNLPFDEGRKEERRRFLGLVEGSESKALRHMFFAERQTSKIPDVPEDTPVRKIEKAAVIGAGTMGGGITMSLVNVGIPVTIIEMKQDALDRGIATIRKNYASTVSKGRLKQEDMDKRMALITPAL 1104
            MS A +YSV DGIAVI MNNPPVNGLGS LRPGI+DGI KA ADPAVKA VI GS K FSGGADIREFN+PK+   P+L +I + QD   KP+VAAIGGFA+GGGLELALGCHYRVA+PK  L LPEVKLGILPG+GGTQRLPR+V  A+ ++MMT+GNP+PAEKG ++GLVDE+  GDLLE AIAFA +LVA GKGPRRIRD++ +VDGD K FF  AR +V KASRGYPAPLEIVACVE A   PFDEGRK ER RF  LVE  ESKALRHMFFAERQT+KIPDVPEDTP R ++ AAVIGAGTMGGGI MSLVN GIP TIIE++Q+ALDRGIATIRKNYA+TVSKGRL+QE MD+ +ALITPAL
Sbjct:    1 MSAAASYSVRDGIAVITMNNPPVNGLGSALRPGIMDGIRKAEADPAVKAAVIWGSPKVFSGGADIREFNSPKAFAPPSLHDIIEAQDSMKKPMVAAIGGFAMGGGLELALGCHYRVAAPKAQLALPEVKLGILPGAGGTQRLPRIVPVAKAIEMMTTGNPIPAEKGKELGLVDEVASGDLLEAAIAFAIELVAQGKGPRRIRDMSARVDGDVKTFFAQAREQVAKASRGYPAPLEIVACVETACTRPFDEGRKFERERFAVLVETGESKALRHMFFAERQTTKIPDVPEDTPTRPVKSAAVIGAGTMGGGIAMSLVNAGIPTTIIEVQQEALDRGIATIRKNYAATVSKGRLQQEAMDQCLALITPAL 368          
BLAST of mRNA_P-wetherbeei_contig9558.1.1 vs. uniprot
Match: UPI0019A02F0B (Enoyl-CoA hydratase/isomerase family protein n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=UPI0019A02F0B)

HSP 1 Score: 521 bits (1341), Expect = 2.160e-178
Identity = 265/366 (72.40%), Postives = 305/366 (83.33%), Query Frame = 1
Query:    1 MSDATTYSVHDGIAVIAMNNPPVNGLGSVLRPGIVDGINKAAADPAVKALVIIGSAKAFSGGADIREFNTPKSSMSPTLPEINDIQDKFGKPLVAAIGGFALGGGLELALGCHYRVASPKTLLGLPEVKLGILPGSGGTQRLPRVVGAAEGVKMMTSGNPVPAEKGLQVGLVDEIVQGDLLEGAIAFAKKLVADGKGPRRIRDLTVKVDGDPKAFFEAARAEVGKASRGYPAPLEIVACVEAAVNLPFDEGRKEERRRFLGLVEGSESKALRHMFFAERQTSKIPDVPEDTPVRKIEKAAVIGAGTMGGGITMSLVNVGIPVTIIEMKQDALDRGIATIRKNYASTVSKGRLKQEDMDKRMALITP 1098
            MS+A  Y V DGIAVI M+NPPVN + +  R  + +G+ KA ADPAVKA+V+IGS KAFSGGA+IREFNT K+  SP LPE+ND QD   KPLVAAIGGFALGGGLELALGCHYRVA PK+ LGLPEVKLG+LPGSGGTQRLPRVV  AE ++M+T+G+PV  +K  Q+GLVDEIVQ +LL+GA+AFA+KL+ + KGPRRIRDL  K+DGDPKAFF AARAEV KASRGYPAPLEIVAC EAA   PFDEGRK ER RF  LVEG ESKA+RHMFFAERQTSKIPDVPEDTPVR I  AAVIGAGTMGGGI M+  N GI V+I+++ QDA+D+G+  IR NYA+TVSKGRLKQ++MDKRMALI P
Sbjct:    1 MSEAAAYCVRDGIAVITMDNPPVNSMSAANRAVVGEGLRKAEADPAVKAIVLIGSEKAFSGGAEIREFNTEKARQSPVLPELNDQQDAMKKPLVAAIGGFALGGGLELALGCHYRVAMPKSQLGLPEVKLGLLPGSGGTQRLPRVVPMAEALRMITTGSPVSGDKAKQLGLVDEIVQENLLDGALAFARKLITENKGPRRIRDLPPKLDGDPKAFFAAARAEVAKASRGYPAPLEIVACCEAAATKPFDEGRKFERERFFHLVEGVESKAMRHMFFAERQTSKIPDVPEDTPVRPIRSAAVIGAGTMGGGIAMNFANAGIAVSIMDVTQDAVDKGLKKIRDNYAATVSKGRLKQDEMDKRMALIRP 366          
BLAST of mRNA_P-wetherbeei_contig9558.1.1 vs. uniprot
Match: A0A521YPV7_9PROT (3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521YPV7_9PROT)

HSP 1 Score: 504 bits (1297), Expect = 9.050e-172
Identity = 253/368 (68.75%), Postives = 298/368 (80.98%), Query Frame = 1
Query:    1 MSDATTYSVHDGIAVIAMNNPPVNGLGSVLRPGIVDGINKAAADPAVKALVIIGSAKAFSGGADIREFNTPKSSMSPTLPEINDIQDKFGKPLVAAIGGFALGGGLELALGCHYRVASPKTLLGLPEVKLGILPGSGGTQRLPRVVGAAEGVKMMTSGNPVPAEKGLQVGLVDEIVQGDLLEGAIAFAKKLVADGKGPRRIRDLTVKVDGDPKAFFEAARAEVGKASRGYPAPLEIVACVEAAVNLPFDEGRKEERRRFLGLVEGSESKALRHMFFAERQTSKIPDVPEDTPVRKIEKAAVIGAGTMGGGITMSLVNVGIPVTIIEMKQDALDRGIATIRKNYASTVSKGRLKQEDMDKRMALITPAL 1104
            MSD T Y+V DG+AVI +NNPPVNGLG+ LR  I+  + +AAAD AV+A+V+IGSAKAFSGGADIREFN P+  + P LPE+ND QD   KPLVAAIGGFALGGGLELAL CHYR+A+P   LGLPEVKLGILPGSGGTQRLPR++  AE ++MMT+G  + AEKG ++GL+DEI  GDLLE AI F+  L+A GKGPRRIRD+  +++GDP+ FF   RA+V K S+GYPAPLEIVAC EAA  LPFDEGRK+ER+RF  LV G ESKALRHMFFAERQT+KIPD+PEDTP R+I KAA++GAGTMGGGI M   N GIPVT+IE  QDALD+G+  IR NYA+TVSKGRL Q DMDKRM+LI   L
Sbjct:    1 MSDVTQYAVRDGVAVITLNNPPVNGLGNALRAAILQNLKRAAADFAVRAVVLIGSAKAFSGGADIREFNAPR--LKPDLPEVNDAQDALAKPLVAAIGGFALGGGLELALACHYRIAAPNAQLGLPEVKLGILPGSGGTQRLPRIIPMAEALRMMTTGAFISAEKGKELGLIDEISHGDLLEDAIRFSLNLLAQGKGPRRIRDMKPRLEGDPEVFFSKLRAQVAKESKGYPAPLEIVACAEAAATLPFDEGRKQERQRFDKLVNGPESKALRHMFFAERQTAKIPDLPEDTPAREIAKAAIVGAGTMGGGIAMCFANAGIPVTMIETSQDALDKGLKRIRDNYAATVSKGRLSQADMDKRMSLIRGTL 366          
BLAST of mRNA_P-wetherbeei_contig9558.1.1 vs. uniprot
Match: A0A1F4EID0_9PROT (3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14 TaxID=1797501 RepID=A0A1F4EID0_9PROT)

HSP 1 Score: 496 bits (1277), Expect = 8.940e-169
Identity = 255/368 (69.29%), Postives = 297/368 (80.71%), Query Frame = 1
Query:    1 MSDATTYSVHDGIAVIAMNNPPVNGLGSVLRPGIVDGINKAAADPAVKALVIIGSAKAFSGGADIREFNTPKSSMSPTLPEINDIQDKFGKPLVAAIGGFALGGGLELALGCHYRVASPKTLLGLPEVKLGILPGSGGTQRLPRVVGAAEGVKMMTSGNPVPAEKGLQVGLVDEIVQGDLLEGAIAFAKKLVADGKGPRRIRDLTVKVDGDPKAFFEAARAEVGKASRGYPAPLEIVACVEAAVNLPFDEGRKEERRRFLGLVEGSESKALRHMFFAERQTSKIPDVPEDTPVRKIEKAAVIGAGTMGGGITMSLVNVGIPVTIIEMKQDALDRGIATIRKNYASTVSKGRLKQEDMDKRMALITPAL 1104
            MSD   Y+V DG+AVI ++NPPVNGLG+ LR GI+  + +A AD AV+A+V+IGSAKAFSGGADIREFN P+  + P LPE+ND QD   KPLVAAIGGFALGGGLELAL CHYR+A+P   LG+PEVKLGILPGSGGTQRLPR++  AE ++MMT+G  + AEK  ++GLVDEIV GDLLE A+ FAK  V  GK  RRIRD+  K+DGDPKAFF   RA+V K S+GYPAPLEIVAC EAA  LPFDEGRK ER+RF  LV GSESKALRHMFFAERQ+SKIPDVPEDTPVR+I KAA++GAGTMGGGI M+  N GIPVT+++  Q+ALDRG+ TIRKNYA+TVSKGRL Q DMDKR  LI   L
Sbjct:    1 MSDVARYAVRDGVAVITLDNPPVNGLGNALRAGILQHLKRADADFAVRAVVLIGSAKAFSGGADIREFNAPR--LKPDLPEVNDAQDALSKPLVAAIGGFALGGGLELALACHYRIAAPNAQLGVPEVKLGILPGSGGTQRLPRIIPMAEALRMMTTGAFISAEKAKELGLVDEIVHGDLLEDAVKFAKGCV--GKPLRRIRDMKAKLDGDPKAFFAQVRAQVAKESKGYPAPLEIVACAEAAATLPFDEGRKVERQRFDRLVSGSESKALRHMFFAERQSSKIPDVPEDTPVREIAKAAIVGAGTMGGGIAMAFANAGIPVTLVDTTQEALDRGLDTIRKNYAATVSKGRLAQADMDKRTGLIRGTL 364          
BLAST of mRNA_P-wetherbeei_contig9558.1.1 vs. uniprot
Match: A0A537DL64_9PROT (3-hydroxyacyl-CoA dehydrogenase n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537DL64_9PROT)

HSP 1 Score: 492 bits (1266), Expect = 4.930e-167
Identity = 245/362 (67.68%), Postives = 295/362 (81.49%), Query Frame = 1
Query:   19 YSVHDGIAVIAMNNPPVNGLGSVLRPGIVDGINKAAADPAVKALVIIGSAKAFSGGADIREFNTPKSSMSPTLPEINDIQDKFGKPLVAAIGGFALGGGLELALGCHYRVASPKTLLGLPEVKLGILPGSGGTQRLPRVVGAAEGVKMMTSGNPVPAEKGLQVGLVDEIVQGDLLEGAIAFAKKLVADGKGPRRIRDLTVKVDGDPKAFFEAARAEVGKASRGYPAPLEIVACVEAAVNLPFDEGRKEERRRFLGLVEGSESKALRHMFFAERQTSKIPDVPEDTPVRKIEKAAVIGAGTMGGGITMSLVNVGIPVTIIEMKQDALDRGIATIRKNYASTVSKGRLKQEDMDKRMALITPAL 1104
            YSV DGIAVI +NNPPVN LG+ LR  I++ + KA  DPAVK  V+IGSAKAFSGGADIREFN P+    P L E+ND QD   KPLVAAIGGFALGGGLELAL CH+R+A PK+ LGLPEVKLG+LPGSGGTQRLPR++  AE ++MMTSGNP+ AE+   +GLVDEIV+GDLLE A+ F  +L+ +G+  RRIRD+  KVDGDPKAFF  AR +V +  +GYPAPLEIVAC +AA+  PFDEGRK ER RF  LV  +ESKALRHMFFAERQT+++P VPEDTPVR+I KAAV+GAGTMGGGI M   N GIPVT++EMKQ+ALD+G+++IR NYA TV+KGRLK E+M++RM+LITP+L
Sbjct:   11 YSVRDGIAVITLNNPPVNSLGNALRAAIMEYLKKAEGDPAVKGAVLIGSAKAFSGGADIREFNKPREK--PDLAELNDQQDAMTKPLVAAIGGFALGGGLELALACHFRIALPKSQLGLPEVKLGLLPGSGGTQRLPRIIAMAEALRMMTSGNPIAAERAKLLGLVDEIVEGDLLEAAVLFLHRLLKEGRPRRRIRDMQAKVDGDPKAFFAQAREQVAREWKGYPAPLEIVACAQAALTRPFDEGRKFERERFAHLVNTTESKALRHMFFAERQTTRVPGVPEDTPVREIRKAAVVGAGTMGGGIAMCFANAGIPVTVVEMKQEALDKGLSSIRSNYAGTVAKGRLKHEEMERRMSLITPSL 370          
BLAST of mRNA_P-wetherbeei_contig9558.1.1 vs. uniprot
Match: A0A1F3YJK7_9PROT (3-hydroxyacyl-CoA dehydrogenase n=3 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F3YJK7_9PROT)

HSP 1 Score: 491 bits (1263), Expect = 1.320e-166
Identity = 253/365 (69.32%), Postives = 297/365 (81.37%), Query Frame = 1
Query:   19 YSVHDGIAVIAMNNPPVNGLGSVLRPGIVDGINKAAADPAVKALVIIGSAKAFSGGADIREFNTPKSSMSPTLPEINDIQDKFGKPLVAAIGGFALGGGLELALGCHYRVASPKTLLGLPEVKLGILPGSGGTQRLPRVVGAAEGVKMMTSGNPVPAEKGLQVGLVDEIVQG---DLLEGAIAFAKKLVADGKGPRRIRDLTVKVDGDPKAFFEAARAEVGKASRGYPAPLEIVACVEAAVNLPFDEGRKEERRRFLGLVEGSESKALRHMFFAERQTSKIPDVPEDTPVRKIEKAAVIGAGTMGGGITMSLVNVGIPVTIIEMKQDALDRGIATIRKNYASTVSKGRLKQEDMDKRMALITPAL 1104
            YS+   +AVI +NNPPVNGLG  LR GI+ G+ +AA D AVKA+V+IGSAKAFSGGADIREFNTPKSS +PTL +I    D   KP+VAAIGGFA+GGGLELAL CHYR+A+P+  L LPEVKLGILPG+GGTQRLPR++  A+ ++M+ SG PVP+EKG  +GLVDE+      DLL  A+A+A +L+A+GKGPRRIRD+T +VD   + FFE ARAE  KASRGYPAPLEIV CVEAAV+ PFDEG K ER RF  LV G+ESKALRHMFFAERQTSKIPDVPEDTPVR I+++A+IGAGTMGGGI M   N GIP T+I+ KQ+ALDRG+ TIRKNYA TVSKGRLKQEDMDKRM LI+ AL
Sbjct:    6 YSLQGSLAVITLNNPPVNGLGHELRSGIMAGLEQAAKDGAVKAVVVIGSAKAFSGGADIREFNTPKSSATPTLHQIIATLDAMQKPVVAAIGGFAMGGGLELALACHYRIAAPRAQLALPEVKLGILPGAGGTQRLPRLIPVADALRMIASGEPVPSEKGKTLGLVDELADAAGSDLLAAALAYADRLIAEGKGPRRIRDMTARVDNAAQ-FFERARAETAKASRGYPAPLEIVTCVEAAVSKPFDEGIKVERARFEHLVNGTESKALRHMFFAERQTSKIPDVPEDTPVRPIKRSAIIGAGTMGGGIAMCFANAGIPATLIDAKQEALDRGLETIRKNYAGTVSKGRLKQEDMDKRMTLISAAL 369          
BLAST of mRNA_P-wetherbeei_contig9558.1.1 vs. uniprot
Match: A0A1F4DGX0_9PROT (3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_63_13 TaxID=1797498 RepID=A0A1F4DGX0_9PROT)

HSP 1 Score: 488 bits (1256), Expect = 1.370e-165
Identity = 250/362 (69.06%), Postives = 291/362 (80.39%), Query Frame = 1
Query:   19 YSVHDGIAVIAMNNPPVNGLGSVLRPGIVDGINKAAADPAVKALVIIGSAKAFSGGADIREFNTPKSSMSPTLPEINDIQDKFGKPLVAAIGGFALGGGLELALGCHYRVASPKTLLGLPEVKLGILPGSGGTQRLPRVVGAAEGVKMMTSGNPVPAEKGLQVGLVDEIVQGDLLEGAIAFAKKLVADGKGPRRIRDLTVKVDGDPKAFFEAARAEVGKASRGYPAPLEIVACVEAAVNLPFDEGRKEERRRFLGLVEGSESKALRHMFFAERQTSKIPDVPEDTPVRKIEKAAVIGAGTMGGGITMSLVNVGIPVTIIEMKQDALDRGIATIRKNYASTVSKGRLKQEDMDKRMALITPAL 1104
            YS+H  +AVI MNNPPVNGLG  LR GI+ G+  AA +  VKA+V+IGSAKAFSGGADIREFNTPK+   PTL +I    D   KP+VAAIGGFA+GGG ELAL CHYR+A+ +  L LPEVKLGILPG+GGTQRLPR++  AE + MM SGNPV  EKG  +G+VDEI +GDLLE A+A+A +L+A GKGPRRIRD++  +D +P  FFE ARA+  K SRGYPAP+EIV CVEAAV  PFDEG K ER  F  LV   ESKALRHMFFAERQT+KIPDVPEDTPVR I+KAA+IGAGTMGGGI M   N GIPVT+I+ KQ+ALDRG+ATIRKNY+ TV+KGRLKQEDMDKRMALI+PAL
Sbjct:    6 YSLHGNVAVITMNNPPVNGLGHALRQGILAGLASAAKNKEVKAVVMIGSAKAFSGGADIREFNTPKAKAQPTLHQIVATLDAMAKPVVAAIGGFAMGGGFELALACHYRIAAARAQLALPEVKLGILPGAGGTQRLPRLIPVAEALGMMISGNPVAGEKGKALGMVDEIAEGDLLEAALAYAGRLIAQGKGPRRIRDMSAGLD-NPGQFFEQARADTAKTSRGYPAPIEIVTCVEAAVTKPFDEGIKVERACFEHLVNSVESKALRHMFFAERQTTKIPDVPEDTPVRPIKKAAIIGAGTMGGGIAMCFANAGIPVTLIDAKQEALDRGLATIRKNYSGTVAKGRLKQEDMDKRMALISPAL 366          
BLAST of mRNA_P-wetherbeei_contig9558.1.1 vs. uniprot
Match: A0A1F4F5H0_9PROT (3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_20 TaxID=1797505 RepID=A0A1F4F5H0_9PROT)

HSP 1 Score: 484 bits (1246), Expect = 4.560e-164
Identity = 246/366 (67.21%), Postives = 295/366 (80.60%), Query Frame = 1
Query:    1 MSDATTYSVHDGIAVIAMNNPPVNGLGSVLRPGIVDGINKAAADPAVKALVIIGSAKAFSGGADIREFNTPKSSMSPTLPEINDIQDKFGKPLVAAIGGFALGGGLELALGCHYRVASPKTLLGLPEVKLGILPGSGGTQRLPRVVGAAEGVKMMTSGNPVPAEKGLQVGLVDEIVQGDLLEGAIAFAKKLVADGKGPRRIRDLTVKVDGDPKAFFEAARAEVGKASRGYPAPLEIVACVEAAVNLPFDEGRKEERRRFLGLVEGSESKALRHMFFAERQTSKIPDVPEDTPVRKIEKAAVIGAGTMGGGITMSLVNVGIPVTIIEMKQDALDRGIATIRKNYASTVSKGRLKQEDMDKRMALITP 1098
            M+DA  YSV DGIAVIAMNNPPVNGLG+ LR GI+D + KA AD AVKA+VIIGSAKAFSGGADIREF  P S   P L ++ND QD   KPLVAAIGGFALGGGLELAL C YR+A+PK+ +G PEVKLGILPGSGGTQRLPR++ AAE +KMM +G PVPAE+  ++G+VDEIV G+LL+  IA+AK+LVA G GPRR+RD+  K DGDP   F+A    +  +++G PAP EI+ CVEAAV LPFDEGRK ER   + L+  +ESKALRH+FFAERQTSKIPDVPEDTP+R+++KAA++GAGTMGGGI MS  N GIPVTI+++ Q+AL+RG+  IR NY  TV +GRLKQEDMDKRM LI+P
Sbjct:    1 MNDAAAYSVADGIAVIAMNNPPVNGLGNALRAGIMDNLKKAQADAAVKAVVIIGSAKAFSGGADIREFGKPMSP--PMLWDVNDQQDAMTKPLVAAIGGFALGGGLELALACSYRIAAPKSQIGFPEVKLGILPGSGGTQRLPRLISAAEALKMMITGEPVPAERAKELGIVDEIVTGELLQAGIAYAKRLVAQGAGPRRVRDMPPKADGDPAKLFQAPPPGIAGSAKGNPAPAEILKCVEAAVTLPFDEGRKVERAASVYLMGTTESKALRHVFFAERQTSKIPDVPEDTPLRELKKAAIVGAGTMGGGIAMSFANAGIPVTILDVSQEALERGMKRIRDNYTVTVQRGRLKQEDMDKRMKLISP 364          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9558.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0S8AZB3_9PROT5.210e-20681.253-hydroxyacyl-CoA dehydrogenase n=1 Tax=Betaproteo... [more]
A0A1F4AUF6_9PROT7.090e-18773.643-hydroxyacyl-CoA dehydrogenase (Fragment) n=1 Tax... [more]
A0A1F4F1J0_9PROT8.370e-18675.003-hydroxyacyl-CoA dehydrogenase n=4 Tax=unclassifi... [more]
UPI0019A02F0B2.160e-17872.40Enoyl-CoA hydratase/isomerase family protein n=1 T... [more]
A0A521YPV7_9PROT9.050e-17268.753-hydroxyacyl-CoA dehydrogenase n=1 Tax=Betaproteo... [more]
A0A1F4EID0_9PROT8.940e-16969.293-hydroxyacyl-CoA dehydrogenase n=1 Tax=Betaproteo... [more]
A0A537DL64_9PROT4.930e-16767.683-hydroxyacyl-CoA dehydrogenase n=2 Tax=Betaproteo... [more]
A0A1F3YJK7_9PROT1.320e-16669.323-hydroxyacyl-CoA dehydrogenase n=3 Tax=unclassifi... [more]
A0A1F4DGX0_9PROT1.370e-16569.063-hydroxyacyl-CoA dehydrogenase n=1 Tax=Betaproteo... [more]
A0A1F4F5H0_9PROT4.560e-16467.213-hydroxyacyl-CoA dehydrogenase n=1 Tax=Betaproteo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9558contigP-wetherbeei_contig9558:1..1104 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1235457.C404_10485
Preferred namefadB
PFAMs3HCDH,3HCDH_N,ECH_1
Model size1104
Max annot lvl28216|Betaproteobacteria
KEGG rclassRC00029,RC00117
KEGG koko:K07516
KEGG ReactionR01975,R04737,R04739,R04741,R04743,R04745,R04748,R05305
KEGG Pathwayko00071,ko00362,ko00650,ko01100,ko01120,ko01200,ko01212,map00071,map00362,map00650,map01100,map01120,map01200,map01212
KEGG ModuleM00087
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.61e-137
EggNOG OGsCOG1024@1|root,COG1250@1|root,COG1024@2|Bacteria,COG1250@2|Bacteria,1MU9P@1224|Proteobacteria,2VH0Y@28216|Betaproteobacteria,1JZX3@119060|Burkholderiaceae
Ec32 ortholog descriptionenoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
Ec32 orthologEc-14_006530.1
EC1.1.1.35
Description3-hydroxyacyl-coa dehydrogenase
Cds size1104
COG categoryI
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187098.617357-CDS-P-wetherbeei_contig9558:0..11041683187098.617357-CDS-P-wetherbeei_contig9558:0..1104Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9558 1..1104 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9558.1.1prot_P-wetherbeei_contig9558.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig9558 1..1104 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig9558.1.1

>prot_P-wetherbeei_contig9558.1.1 ID=prot_P-wetherbeei_contig9558.1.1|Name=mRNA_P-wetherbeei_contig9558.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=368bp
MSDATTYSVHDGIAVIAMNNPPVNGLGSVLRPGIVDGINKAAADPAVKAL
VIIGSAKAFSGGADIREFNTPKSSMSPTLPEINDIQDKFGKPLVAAIGGF
ALGGGLELALGCHYRVASPKTLLGLPEVKLGILPGSGGTQRLPRVVGAAE
GVKMMTSGNPVPAEKGLQVGLVDEIVQGDLLEGAIAFAKKLVADGKGPRR
IRDLTVKVDGDPKAFFEAARAEVGKASRGYPAPLEIVACVEAAVNLPFDE
GRKEERRRFLGLVEGSESKALRHMFFAERQTSKIPDVPEDTPVRKIEKAA
VIGAGTMGGGITMSLVNVGIPVTIIEMKQDALDRGIATIRKNYASTVSKG
RLKQEDMDKRMALITPAL
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mRNA from alignment at P-wetherbeei_contig9558:1..1104-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig9558.1.1 ID=mRNA_P-wetherbeei_contig9558.1.1|Name=mRNA_P-wetherbeei_contig9558.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1104bp|location=Sequence derived from alignment at P-wetherbeei_contig9558:1..1104- (Phaeothamnion wetherbeei SAG_119_79)
ATGAGCGACGCAACCACCTACTCCGTGCACGACGGCATCGCCGTCATCGC GATGAACAACCCGCCGGTCAACGGCCTGGGCAGCGTGCTGCGCCCCGGCA TCGTCGACGGCATCAACAAGGCGGCCGCCGACCCCGCGGTGAAGGCGCTG GTGATCATCGGCTCGGCCAAGGCCTTCTCCGGCGGCGCGGACATCCGCGA GTTCAACACGCCCAAGTCCTCGATGTCGCCGACGCTGCCCGAGATCAACG ACATCCAGGACAAGTTCGGCAAGCCCCTGGTCGCCGCGATCGGCGGCTTC GCGCTCGGCGGCGGGCTGGAACTCGCGCTGGGCTGCCACTACCGCGTCGC GTCGCCCAAGACGCTGCTGGGCCTGCCCGAGGTCAAGCTCGGCATCCTCC CCGGCTCGGGCGGCACGCAACGCCTGCCGCGCGTCGTCGGCGCCGCCGAG GGCGTGAAGATGATGACCTCCGGCAACCCGGTCCCGGCCGAGAAGGGCCT GCAGGTCGGGCTCGTGGATGAAATCGTGCAGGGCGACCTGCTCGAGGGCG CGATCGCGTTCGCGAAAAAGCTCGTTGCCGACGGCAAAGGCCCGCGCCGC ATCCGCGACCTCACCGTCAAGGTCGACGGCGACCCGAAGGCATTCTTCGA GGCCGCCCGCGCCGAGGTCGGCAAGGCCTCGCGCGGCTACCCCGCGCCGC TCGAGATCGTCGCCTGCGTCGAGGCCGCCGTGAACCTGCCGTTCGACGAA GGCCGCAAGGAGGAGCGCCGCCGTTTCCTCGGCTTGGTAGAGGGCAGCGA ATCGAAGGCGCTGCGCCACATGTTCTTCGCCGAGCGCCAGACCTCGAAGA TCCCGGACGTGCCGGAAGACACGCCGGTCCGCAAGATCGAGAAGGCGGCC GTCATCGGCGCCGGCACCATGGGCGGCGGCATCACGATGAGCCTGGTGAA CGTCGGCATACCGGTGACGATCATCGAGATGAAGCAGGACGCCCTCGATC GCGGCATCGCCACCATCAGGAAGAATTACGCCAGCACCGTCTCCAAGGGC CGCCTGAAGCAGGAGGACATGGACAAGCGCATGGCGCTGATCACGCCGGC CCTC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig9558:1..1104-

>mRNA_P-wetherbeei_contig9558.1.1 ID=mRNA_P-wetherbeei_contig9558.1.1|Name=mRNA_P-wetherbeei_contig9558.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1104bp|location=Sequence derived from alignment at P-wetherbeei_contig9558:1..1104- (Phaeothamnion wetherbeei SAG_119_79)
ATGAGCGACGCAACCACCTACTCCGTGCACGACGGCATCGCCGTCATCGC
GATGAACAACCCGCCGGTCAACGGCCTGGGCAGCGTGCTGCGCCCCGGCA
TCGTCGACGGCATCAACAAGGCGGCCGCCGACCCCGCGGTGAAGGCGCTG
GTGATCATCGGCTCGGCCAAGGCCTTCTCCGGCGGCGCGGACATCCGCGA
GTTCAACACGCCCAAGTCCTCGATGTCGCCGACGCTGCCCGAGATCAACG
ACATCCAGGACAAGTTCGGCAAGCCCCTGGTCGCCGCGATCGGCGGCTTC
GCGCTCGGCGGCGGGCTGGAACTCGCGCTGGGCTGCCACTACCGCGTCGC
GTCGCCCAAGACGCTGCTGGGCCTGCCCGAGGTCAAGCTCGGCATCCTCC
CCGGCTCGGGCGGCACGCAACGCCTGCCGCGCGTCGTCGGCGCCGCCGAG
GGCGTGAAGATGATGACCTCCGGCAACCCGGTCCCGGCCGAGAAGGGCCT
GCAGGTCGGGCTCGTGGATGAAATCGTGCAGGGCGACCTGCTCGAGGGCG
CGATCGCGTTCGCGAAAAAGCTCGTTGCCGACGGCAAAGGCCCGCGCCGC
ATCCGCGACCTCACCGTCAAGGTCGACGGCGACCCGAAGGCATTCTTCGA
GGCCGCCCGCGCCGAGGTCGGCAAGGCCTCGCGCGGCTACCCCGCGCCGC
TCGAGATCGTCGCCTGCGTCGAGGCCGCCGTGAACCTGCCGTTCGACGAA
GGCCGCAAGGAGGAGCGCCGCCGTTTCCTCGGCTTGGTAGAGGGCAGCGA
ATCGAAGGCGCTGCGCCACATGTTCTTCGCCGAGCGCCAGACCTCGAAGA
TCCCGGACGTGCCGGAAGACACGCCGGTCCGCAAGATCGAGAAGGCGGCC
GTCATCGGCGCCGGCACCATGGGCGGCGGCATCACGATGAGCCTGGTGAA
CGTCGGCATACCGGTGACGATCATCGAGATGAAGCAGGACGCCCTCGATC
GCGGCATCGCCACCATCAGGAAGAATTACGCCAGCACCGTCTCCAAGGGC
CGCCTGAAGCAGGAGGACATGGACAAGCGCATGGCGCTGATCACGCCGGC
CCTC
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