mRNA_P-wetherbeei_contig9528.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig9528.4.1
Unique NamemRNA_P-wetherbeei_contig9528.4.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig9528.4.1 vs. uniprot
Match: A0A537DVK7_9PROT (Peptidylprolyl isomerase n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537DVK7_9PROT)

HSP 1 Score: 176 bits (447), Expect = 3.630e-54
Identity = 88/143 (61.54%), Postives = 106/143 (74.13%), Query Frame = 1
Query:    4 IAVAPDHVVSIGLVMHDAQGVLIHESDEPVAYLHGGYGGLFEALEMVLEGKRVGDSVQVQLEPDEAFGDYDADLVRIEQRSRYGXXXXXXXEVEDAFEGEEPRVYVVTDLAGDTVVLDGNHPLAGIALRFECKVLEVRAASED 432
            +AV PD VVS+ + M+DAQG L+  S EPV YLHGGYGGL EALE  LEGK  G+S++VQLEP++AFG+YDA L+R+E  +RYG       EVEDAFEG  PR Y VTDLAG   VLD NHPLAG+ALRF C V  VR A+++
Sbjct:    4 VAVGPDAVVSLKIEMYDAQGALLQASSEPVTYLHGGYGGLLEALEAALEGKHPGESIKVQLEPEQAFGEYDAGLLRVEPAARYGAGLRIGMEVEDAFEGAAPRRYTVTDLAGGKAVLDANHPLAGMALRFSCTVTAVRQATKE 146          
BLAST of mRNA_P-wetherbeei_contig9528.4.1 vs. uniprot
Match: A0A537BTM4_9PROT (Peptidylprolyl isomerase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537BTM4_9PROT)

HSP 1 Score: 168 bits (426), Expect = 4.990e-51
Identity = 84/143 (58.74%), Postives = 105/143 (73.43%), Query Frame = 1
Query:    4 IAVAPDHVVSIGLVMHDAQGVLIHESDEPVAYLHGGYGGLFEALEMVLEGKRVGDSVQVQLEPDEAFGDYDADLVRIEQRSRYGXXXXXXXEVEDAFEGEEPRVYVVTDLAGDTVVLDGNHPLAGIALRFECKVLEVRAASED 432
            + V PD VVS+ + M+DAQG L+  S  PV YLHGG GGL EALE  LEGK  G+S++VQLEP++AFG+YD +L+R+E  +RYG       EVEDAFEG  PR Y VTDLAGD VVLD NHPLAG+ALRF C +  +R A+++
Sbjct:    4 VGVGPDTVVSVKIEMYDAQGALLQASPGPVTYLHGGDGGLLEALEAALEGKHPGESIKVQLEPEQAFGEYDTNLLRVEPAARYGAGLRIGMEVEDAFEGGAPRRYTVTDLAGDKVVLDANHPLAGMALRFFCTITGLRRATKE 146          
BLAST of mRNA_P-wetherbeei_contig9528.4.1 vs. uniprot
Match: A0A521YZY1_9PROT (Peptidylprolyl isomerase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521YZY1_9PROT)

HSP 1 Score: 146 bits (369), Expect = 1.950e-42
Identity = 73/143 (51.05%), Postives = 101/143 (70.63%), Query Frame = 1
Query:    4 IAVAPDHVVSIGLVMHDAQGVLIHESDEPVAYLHGGYGGLFEALEMVLEGKRVGDSVQVQLEPDEAFGDYDADLVRIEQRSRYGXXXXXXXEVEDAFEGEEPRVYVVTDLAGDTVVLDGNHPLAGIALRFECKVLEVRAASED 432
            + VA D VVS+ + ++DA G L+    EP+ YLHGGYGG+ EALE  LEGK  G++++VQLEP++AFG+YDA L+R+E   RYG       ++E     E+ R+Y +TD+A  +VVLDGNHPLAGI+LRF C V  VR A+++
Sbjct:    4 VPVARDTVVSLRIELYDAHGTLLDAPAEPLTYLHGGYGGMLEALERALEGKLPGETLRVQLEPEQAFGEYDAALLRVEPAERYGEGLEVGMQIE-----EDSRIYAITDVAAGSVVLDGNHPLAGISLRFTCTVTAVRPATKE 141          
BLAST of mRNA_P-wetherbeei_contig9528.4.1 vs. uniprot
Match: A0A3A6NRE7_9BURK (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Oxalobacter sp. TaxID=2093374 RepID=A0A3A6NRE7_9BURK)

HSP 1 Score: 142 bits (358), Expect = 1.810e-40
Identity = 72/145 (49.66%), Postives = 99/145 (68.28%), Query Frame = 1
Query:   10 VAPDHVVSIGLVMHDAQGVLIHESDEPVAYLHGGYGGLFEALEMVLEGKRVGDSVQVQLEPDEAFGDYDADLVRIEQRSRYGXXXXXXXEVEDAFEGE----EPRVYVVTDLAGDTVVLDGNHPLAGIALRFECKVLEVRAASED 432
            +A + VV++   + DAQ  L+ E+ EP+ YLHGGY     ++E  LEGK+VGDSV +Q+EP++AFG+YDADLV+IE R R+        + E   EGE    E  +YVVTD+  D V+LDGNHPLAG+ALRF  +V EVR A+++
Sbjct:    3 IAKNTVVTVHYTLFDAQNNLLEENGEPIVYLHGGYESTLPSIEQALEGKKVGDSVTIQVEPEDAFGEYDADLVKIEARDRFPTPLEVGMQFEGVPEGEDDDEEAMIYVVTDIVDDKVILDGNHPLAGMALRFALRVSEVRGATKE 147          
BLAST of mRNA_P-wetherbeei_contig9528.4.1 vs. uniprot
Match: A0A6J5FZ16_9BURK (FKBP-type peptidyl-prolyl cis-trans isomerase SlyD n=39 Tax=Burkholderiaceae TaxID=119060 RepID=A0A6J5FZ16_9BURK)

HSP 1 Score: 142 bits (358), Expect = 2.300e-40
Identity = 80/149 (53.69%), Postives = 97/149 (65.10%), Query Frame = 1
Query:   10 VAPDHVVSIGLVMHDAQGVLIHESDEPVAYLHGGYGGLFEALEMVLEGKRVGDSVQVQLEPDEAFGDYDADLVRIEQRSRYGXXXXXXXEVEDAFEGE--------EPRVYVVTDLAGDTVVLDGNHPLAGIALRFECKVLEVRAASED 432
            +A D VVS+   + DAQG LI ESDEP+ YLHGGY G F  +E VL+GK  G   Q+QLEP +AFG+YD DLV+IE R+R+        EV   FEG         +  +Y VTD+A D VVLDGNHPLAG+ALRF   V EVR A+ED
Sbjct:    3 IAKDTVVSVAYKLSDAQGNLIEESDEPMVYLHGGYDGTFPKIEEVLDGKEPGFETQIQLEPSDAFGEYDPDLVKIEPRNRF----PEPLEVGMQFEGTPEEGDDDLDTLIYTVTDVAEDKVVLDGNHPLAGMALRFALSVKEVRQATED 147          
BLAST of mRNA_P-wetherbeei_contig9528.4.1 vs. uniprot
Match: A0A0F5JX86_9BURK (Peptidylprolyl isomerase n=1 Tax=Robbsia andropogonis TaxID=28092 RepID=A0A0F5JX86_9BURK)

HSP 1 Score: 140 bits (354), Expect = 9.540e-40
Identity = 75/145 (51.72%), Postives = 96/145 (66.21%), Query Frame = 1
Query:   10 VAPDHVVSIGLVMHDAQGVLIHESDEPVAYLHGGYGGLFEALEMVLEGKRVGDSVQVQLEPDEAFGDYDADLVRIEQRSRYGXXXXXXXEVE----DAFEGEEPRVYVVTDLAGDTVVLDGNHPLAGIALRFECKVLEVRAASED 432
            +A + VV++   + DAQG LI ESDEP+ YLHGGY G F  +E  L+G+  G   Q+QLEP +AFGDYD +LV++E R+R+        + E    +A E  E  +Y VTDLA D VVLDGNHPLAG+ALRF   V EVR A+ED
Sbjct:    3 IAKNTVVALKYTLSDAQGNLIEESDEPLVYLHGGYDGTFPKIEEALDGQENGFETQIQLEPSDAFGDYDPELVKVEARTRFPEPLEVGMQFEGAPDEADEASETLIYTVTDLAEDKVVLDGNHPLAGMALRFALTVTEVREATED 147          
BLAST of mRNA_P-wetherbeei_contig9528.4.1 vs. uniprot
Match: E5AS59_MYCRK (Peptidyl-prolyl cis-trans isomerase n=5 Tax=Mycetohabitans TaxID=2571159 RepID=E5AS59_MYCRK)

HSP 1 Score: 140 bits (353), Expect = 1.560e-39
Identity = 78/145 (53.79%), Postives = 95/145 (65.52%), Query Frame = 1
Query:   10 VAPDHVVSIGLVMHDAQGVLIHESDEPVAYLHGGYGGLFEALEMVLEGKRVGDSVQVQLEPDEAFGDYDADLVRIEQRSRYGXXXXXXXEVEDAFEGEEPRV----YVVTDLAGDTVVLDGNHPLAGIALRFECKVLEVRAASED 432
            +A + VVS+   + DAQG LI ESDEP+ YLHGGY G F  +E VLEG+  G S Q+QLEP +AFGDYD +LV+IE R R+        + E   EG +  V    Y VTDLA D VVLDGNHPLAG+ALRF   V +VR A+ D
Sbjct:    3 IAKNTVVSVAYKLSDAQGNLIEESDEPMVYLHGGYDGTFPKIEEVLEGQEAGFSTQIQLEPVDAFGDYDPELVKIEPRDRFPEPLEVGMQFEGTPEGGDDEVDTLIYTVTDLAEDKVVLDGNHPLAGMALRFLLTVRDVREATAD 147          
BLAST of mRNA_P-wetherbeei_contig9528.4.1 vs. uniprot
Match: A0A4R3YEZ7_9PROT (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Sulfurirhabdus autotrophica TaxID=1706046 RepID=A0A4R3YEZ7_9PROT)

HSP 1 Score: 139 bits (349), Expect = 2.760e-39
Identity = 70/140 (50.00%), Postives = 96/140 (68.57%), Query Frame = 1
Query:   10 VAPDHVVSIGLVMHDAQGVLIHESDEPVAYLHGGYGGLFEALEMVLEGKRVGDSVQVQLEPDEAFGDYDADLVRIEQRSRYGXXXXXXXEVEDAFEG-EEPRVYVVTDLAGDTVVLDGNHPLAGIALRFECKVLEVRAAS 426
            +A D VV+I   + D +G ++ +SD+PV YLHGGY G+F  +E  L+GK+ GDS +V LEPD AFG+YD +LVR+E R+++        + E A EG EE  +Y +TD+A D V++DGNHPLAG  L F C + EVRAAS
Sbjct:    3 IAKDTVVTINYELKDKEGKILEKSDQPVTYLHGGYDGIFPVVEDSLDGKKAGDSCEVMLEPDNAFGEYDENLVRVEPRNQFPENAEVGMQFEGAPEGSEEILIYTITDMAEDKVIVDGNHPLAGQTLVFNCTIQEVRAAS 142          
BLAST of mRNA_P-wetherbeei_contig9528.4.1 vs. uniprot
Match: A0A069PU62_9BURK (Peptidylprolyl isomerase n=6 Tax=Caballeronia TaxID=1827195 RepID=A0A069PU62_9BURK)

HSP 1 Score: 139 bits (350), Expect = 3.960e-39
Identity = 73/145 (50.34%), Postives = 94/145 (64.83%), Query Frame = 1
Query:   10 VAPDHVVSIGLVMHDAQGVLIHESDEPVAYLHGGYGGLFEALEMVLEGKRVGDSVQVQLEPDEAFGDYDADLVRIEQRSRYGXXXXXXXEVE----DAFEGEEPRVYVVTDLAGDTVVLDGNHPLAGIALRFECKVLEVRAASED 432
            +A D VVS+   + DAQG LI ESDEP+ YLHGGY G F  +E  L+G   G   Q+QLEP +AFG+YD +LV++E RSR+        + E    D  +  +  +Y VTD+A D VVLDGNHPLAG+ALRF   V EVR A++D
Sbjct:    3 IAKDTVVSVAYKLSDAQGNLIEESDEPMVYLHGGYDGTFPKIEEALDGHEAGYQTQIQLEPQDAFGEYDPELVKVEARSRFPEPLEVGMQFEGTPEDGEDDADSLIYTVTDVAEDKVVLDGNHPLAGMALRFALSVQEVRTATDD 147          
BLAST of mRNA_P-wetherbeei_contig9528.4.1 vs. uniprot
Match: UPI00124B6A33 (peptidylprolyl isomerase n=1 Tax=Lacisediminimonas profundi TaxID=2603856 RepID=UPI00124B6A33)

HSP 1 Score: 139 bits (349), Expect = 4.850e-39
Identity = 74/143 (51.75%), Postives = 97/143 (67.83%), Query Frame = 1
Query:   10 VAPDHVVSIGLVMHDAQGVLIHESDEPVAYLHGGYGGLFEALEMVLEGKRVGDSVQVQLEPDEAFGDYDADLVRIEQRSRYGXXXXXXXEVEDA--FEGEEPRVYVVTDLAGDTVVLDGNHPLAGIALRFECKVLEVRAASED 432
            +A D VV++   + DAQG LI ES EP+ YLHGGYG     LE  L GK VGD + VQ+EP++AFG+YD++LVRIE R+R         + E A   + EE  ++ VTD+A D VVLDGNHPLAG+ALRF  +V+ VR AS++
Sbjct:    3 IAQDTVVTLNYKLSDAQGNLIEESREPMVYLHGGYGNTLPKLEEALAGKNVGDKLDVQVEPEDAFGEYDSELVRIEARNRLPDPLEVGMQFEGAPDADDEESVIFTVTDIADDKVVLDGNHPLAGMALRFSLEVVAVRPASDE 145          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9528.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A537DVK7_9PROT3.630e-5461.54Peptidylprolyl isomerase n=2 Tax=Betaproteobacteri... [more]
A0A537BTM4_9PROT4.990e-5158.74Peptidylprolyl isomerase n=1 Tax=Betaproteobacteri... [more]
A0A521YZY1_9PROT1.950e-4251.05Peptidylprolyl isomerase n=1 Tax=Betaproteobacteri... [more]
A0A3A6NRE7_9BURK1.810e-4049.66Peptidyl-prolyl cis-trans isomerase n=1 Tax=Oxalob... [more]
A0A6J5FZ16_9BURK2.300e-4053.69FKBP-type peptidyl-prolyl cis-trans isomerase SlyD... [more]
A0A0F5JX86_9BURK9.540e-4051.72Peptidylprolyl isomerase n=1 Tax=Robbsia andropogo... [more]
E5AS59_MYCRK1.560e-3953.79Peptidyl-prolyl cis-trans isomerase n=5 Tax=Myceto... [more]
A0A4R3YEZ7_9PROT2.760e-3950.00Peptidyl-prolyl cis-trans isomerase n=1 Tax=Sulfur... [more]
A0A069PU62_9BURK3.960e-3950.34Peptidylprolyl isomerase n=6 Tax=Caballeronia TaxI... [more]
UPI00124B6A334.850e-3951.75peptidylprolyl isomerase n=1 Tax=Lacisediminimonas... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9528contigP-wetherbeei_contig9528:2096..2527 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog159450.NH14_23480
Preferred nameslyD
PFAMsFKBP_C
Model size432
Max annot lvl28216|Betaproteobacteria
KEGG koko:K03775
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.66e-41
EggNOG OGsCOG1047@1|root,COG1047@2|Bacteria,1RD35@1224|Proteobacteria,2VQA2@28216|Betaproteobacteria,1JZN6@119060|Burkholderiaceae
EC5.2.1.8
Descriptionpeptidyl-prolyl
Cds size432
COG categoryG
BRITEko00000,ko01000,ko03110
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187097.5502765-CDS-P-wetherbeei_contig9528:2095..25271683187097.5502765-CDS-P-wetherbeei_contig9528:2095..2527Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9528 2096..2527 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9528.4.1prot_P-wetherbeei_contig9528.4.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig9528 2096..2527 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig9528.4.1

>prot_P-wetherbeei_contig9528.4.1 ID=prot_P-wetherbeei_contig9528.4.1|Name=mRNA_P-wetherbeei_contig9528.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=144bp
MIAVAPDHVVSIGLVMHDAQGVLIHESDEPVAYLHGGYGGLFEALEMVLE
GKRVGDSVQVQLEPDEAFGDYDADLVRIEQRSRYGDGLEVGMEVEDAFEG
EEPRVYVVTDLAGDTVVLDGNHPLAGIALRFECKVLEVRAASED
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mRNA from alignment at P-wetherbeei_contig9528:2096..2527+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig9528.4.1 ID=mRNA_P-wetherbeei_contig9528.4.1|Name=mRNA_P-wetherbeei_contig9528.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=432bp|location=Sequence derived from alignment at P-wetherbeei_contig9528:2096..2527+ (Phaeothamnion wetherbeei SAG_119_79)
ATGATTGCCGTAGCCCCCGATCACGTTGTCTCCATTGGGCTCGTGATGCA TGACGCCCAGGGTGTCCTGATCCATGAGTCGGACGAACCGGTCGCATACC TGCACGGAGGGTACGGCGGCCTGTTCGAGGCGCTGGAGATGGTCCTCGAA GGCAAGCGCGTGGGCGATTCGGTGCAGGTGCAACTGGAACCCGACGAGGC GTTCGGCGACTACGACGCCGACCTCGTTCGCATCGAGCAGCGCTCGCGCT ATGGCGACGGCCTCGAGGTCGGCATGGAGGTCGAGGACGCATTCGAAGGC GAAGAGCCGCGCGTTTACGTGGTCACCGACCTGGCGGGCGATACCGTCGT GCTCGATGGCAACCATCCGCTCGCCGGCATCGCGTTGCGCTTCGAGTGCA AGGTCCTCGAAGTTCGCGCGGCGAGCGAGGAT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig9528:2096..2527+

>mRNA_P-wetherbeei_contig9528.4.1 ID=mRNA_P-wetherbeei_contig9528.4.1|Name=mRNA_P-wetherbeei_contig9528.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=432bp|location=Sequence derived from alignment at P-wetherbeei_contig9528:2096..2527+ (Phaeothamnion wetherbeei SAG_119_79)
ATGATTGCCGTAGCCCCCGATCACGTTGTCTCCATTGGGCTCGTGATGCA
TGACGCCCAGGGTGTCCTGATCCATGAGTCGGACGAACCGGTCGCATACC
TGCACGGAGGGTACGGCGGCCTGTTCGAGGCGCTGGAGATGGTCCTCGAA
GGCAAGCGCGTGGGCGATTCGGTGCAGGTGCAACTGGAACCCGACGAGGC
GTTCGGCGACTACGACGCCGACCTCGTTCGCATCGAGCAGCGCTCGCGCT
ATGGCGACGGCCTCGAGGTCGGCATGGAGGTCGAGGACGCATTCGAAGGC
GAAGAGCCGCGCGTTTACGTGGTCACCGACCTGGCGGGCGATACCGTCGT
GCTCGATGGCAACCATCCGCTCGCCGGCATCGCGTTGCGCTTCGAGTGCA
AGGTCCTCGAAGTTCGCGCGGCGAGCGAGGAT
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