mRNA_P-wetherbeei_contig9528.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig9528.3.1
Unique NamemRNA_P-wetherbeei_contig9528.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig9528.3.1 vs. uniprot
Match: A0A1F4F543_9PROT (Thioredoxin peroxidase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_20 TaxID=1797505 RepID=A0A1F4F543_9PROT)

HSP 1 Score: 256 bits (653), Expect = 2.380e-85
Identity = 116/155 (74.84%), Postives = 140/155 (90.32%), Query Frame = 1
Query:    1 MLRTGQTAPSFSLPDADMQTVSLAAFKGRKNVVLYFYPRDGTPGCTMEAIEFSDHEEQFGRHDCVILGISRDDCMVHAEFRDKHGLSVNLLSDYEGEVCRKYGVLQEKESEGVKRLFLVRSTFVIDKKGVIRHAHYGVTPRGHALEVFEAVKKLK 465
            ML+ GQ AP F+LPDADMQTVSL+ FKG+K+VVLYFYPRDGTPGCT+ A +FSDHE+QFGRHDCV++G+SRDDC+ HA FRD+HGL+++LLSD EG+VCR YGVLQE+E+EGV+R  LVRSTFVIDKKGVIRHA YGVTPRGHA EV++ VK+L+
Sbjct:    1 MLQPGQPAPPFALPDADMQTVSLSEFKGKKHVVLYFYPRDGTPGCTLVATDFSDHEDQFGRHDCVVVGVSRDDCLTHATFRDQHGLTISLLSDPEGDVCRMYGVLQEQENEGVRRECLVRSTFVIDKKGVIRHAAYGVTPRGHAAEVYDVVKRLR 155          
BLAST of mRNA_P-wetherbeei_contig9528.3.1 vs. uniprot
Match: A0A0S8B694_9PROT (Thioredoxin peroxidase n=1 Tax=Betaproteobacteria bacterium SG8_39 TaxID=1703390 RepID=A0A0S8B694_9PROT)

HSP 1 Score: 254 bits (649), Expect = 9.680e-85
Identity = 116/155 (74.84%), Postives = 136/155 (87.74%), Query Frame = 1
Query:    1 MLRTGQTAPSFSLPDADMQTVSLAAFKGRKNVVLYFYPRDGTPGCTMEAIEFSDHEEQFGRHDCVILGISRDDCMVHAEFRDKHGLSVNLLSDYEGEVCRKYGVLQEKESEGVKRLFLVRSTFVIDKKGVIRHAHYGVTPRGHALEVFEAVKKLK 465
            M+RTG+ AP+FSLPDADMQ V+L+AFKG+KNVVL+FYPRDGTPGC M+A++FSDHE  F RHDCVILG+SRDDC+ HAEFRD HG+S+ LLSD EG VCR YGVLQEKE+EGV+R  LVRSTFVIDKKGV+RH  YGV PRGHA EVF+ V++LK
Sbjct:    1 MMRTGKPAPNFSLPDADMQVVTLSAFKGKKNVVLFFYPRDGTPGCIMQAVDFSDHESDFDRHDCVILGVSRDDCLRHAEFRDAHGVSIGLLSDTEGAVCRDYGVLQEKETEGVRRESLVRSTFVIDKKGVLRHVAYGVNPRGHAAEVFDVVRRLK 155          
BLAST of mRNA_P-wetherbeei_contig9528.3.1 vs. uniprot
Match: A0A1F4CVW3_9PROT (Thioredoxin peroxidase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_19 TaxID=1797504 RepID=A0A1F4CVW3_9PROT)

HSP 1 Score: 253 bits (645), Expect = 4.070e-84
Identity = 114/156 (73.08%), Postives = 139/156 (89.10%), Query Frame = 1
Query:    1 MLRTGQTAPSFSLPDADMQTVSLAAFKGRKNVVLYFYPRDGTPGCTMEAIEFSDHEEQFGRHDCVILGISRDDCMVHAEFRDKHGLSVNLLSDYEGEVCRKYGVLQEKESE-GVKRLFLVRSTFVIDKKGVIRHAHYGVTPRGHALEVFEAVKKLK 465
            ML+ GQ APSF LPDADMQTV+L+AFKG+K+VVLYFYPRDGTPGCTM   EFSDHE+QFG+HDCV+LG+SRDDC+ HA+FRD+HG+++ LLSD EGEVCRKYGV+QEK++E G +R  +VRSTF+IDKKGVIRHA YGV PRGHA EVF+ V++L+
Sbjct:    1 MLQPGQPAPSFELPDADMQTVNLSAFKGKKHVVLYFYPRDGTPGCTMVTTEFSDHEDQFGKHDCVVLGVSRDDCLTHADFRDRHGVTIGLLSDPEGEVCRKYGVIQEKQAEDGARRECMVRSTFIIDKKGVIRHAAYGVNPRGHAAEVFDVVRRLR 156          
BLAST of mRNA_P-wetherbeei_contig9528.3.1 vs. uniprot
Match: A0A521YZY5_9PROT (Thioredoxin peroxidase n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A521YZY5_9PROT)

HSP 1 Score: 252 bits (643), Expect = 7.940e-84
Identity = 112/155 (72.26%), Postives = 137/155 (88.39%), Query Frame = 1
Query:    1 MLRTGQTAPSFSLPDADMQTVSLAAFKGRKNVVLYFYPRDGTPGCTMEAIEFSDHEEQFGRHDCVILGISRDDCMVHAEFRDKHGLSVNLLSDYEGEVCRKYGVLQEKESEGVKRLFLVRSTFVIDKKGVIRHAHYGVTPRGHALEVFEAVKKLK 465
            ML  GQ AP F+LPDADMQTV L+AFKG+KNVVLYFYP+DGTPGCT+   +FSDHE+QF +HDCV+LG+SRDDC+ HA+FRD++G++++LLSD EGEVCRKYGV+QEKE+EGV+R  LVRSTF+IDKKGVIRH  YGV PRGHA EVF+ VK+L+
Sbjct:    1 MLEPGQPAPEFALPDADMQTVDLSAFKGKKNVVLYFYPKDGTPGCTLVTTDFSDHEDQFQKHDCVVLGVSRDDCLTHADFRDRNGVTISLLSDTEGEVCRKYGVIQEKETEGVRRECLVRSTFIIDKKGVIRHVTYGVNPRGHAAEVFDVVKRLR 155          
BLAST of mRNA_P-wetherbeei_contig9528.3.1 vs. uniprot
Match: A0A1F3YS53_9PROT (Thioredoxin peroxidase n=1 Tax=Betaproteobacteria bacterium RBG_16_66_20 TaxID=1797479 RepID=A0A1F3YS53_9PROT)

HSP 1 Score: 249 bits (635), Expect = 1.320e-82
Identity = 113/155 (72.90%), Postives = 139/155 (89.68%), Query Frame = 1
Query:    1 MLRTGQTAPSFSLPDADMQTVSLAAFKGRKNVVLYFYPRDGTPGCTMEAIEFSDHEEQFGRHDCVILGISRDDCMVHAEFRDKHGLSVNLLSDYEGEVCRKYGVLQEKESEGVKRLFLVRSTFVIDKKGVIRHAHYGVTPRGHALEVFEAVKKLK 465
            ML+ GQTAP+F+LPDADMQTV+L++F G+K +VLYFYPRD TPGCT++A EFSDHE +FGR +CVILG+SRDDC+ HA+FRDKHGLS+ LLSD EGEVCR+YGVLQEKE++GV+R  +VRSTFVIDKKGVIRHA YGV+PR HA E+++ V+KLK
Sbjct:    1 MLQPGQTAPAFTLPDADMQTVALSSFIGKKRIVLYFYPRDNTPGCTLQAAEFSDHEGEFGRCNCVILGVSRDDCLTHADFRDKHGLSIGLLSDPEGEVCRRYGVLQEKETDGVRRECVVRSTFVIDKKGVIRHAAYGVSPRHHAAEIYDVVRKLK 155          
BLAST of mRNA_P-wetherbeei_contig9528.3.1 vs. uniprot
Match: UPI0019A60AF0 (Peroxiredoxin n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=UPI0019A60AF0)

HSP 1 Score: 248 bits (632), Expect = 3.770e-82
Identity = 115/155 (74.19%), Postives = 134/155 (86.45%), Query Frame = 1
Query:    1 MLRTGQTAPSFSLPDADMQTVSLAAFKGRKNVVLYFYPRDGTPGCTMEAIEFSDHEEQFGRHDCVILGISRDDCMVHAEFRDKHGLSVNLLSDYEGEVCRKYGVLQEKESEGVKRLFLVRSTFVIDKKGVIRHAHYGVTPRGHALEVFEAVKKLK 465
            ML+ GQ AP F+LPDADMQ+V L++F G+K++VLYFYPRD TPGCTMEA EFSDHE +F + +CVILG+SRDDCM HAEFRDKHGL + LLSD EGEVCR+YGVLQEKE +GV+R  LVRSTFVIDKKGVIRHA YGV PR HALE+F+ V+KLK
Sbjct:    1 MLQPGQNAPVFTLPDADMQSVELSSFLGKKHIVLYFYPRDNTPGCTMEAAEFSDHENEFAQRNCVILGVSRDDCMKHAEFRDKHGLCIGLLSDPEGEVCRRYGVLQEKEIDGVRREHLVRSTFVIDKKGVIRHAAYGVNPRHHALEIFDVVRKLK 155          
BLAST of mRNA_P-wetherbeei_contig9528.3.1 vs. uniprot
Match: A0A536X9C1_9PROT (Thioredoxin peroxidase n=4 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536X9C1_9PROT)

HSP 1 Score: 248 bits (632), Expect = 3.900e-82
Identity = 111/156 (71.15%), Postives = 136/156 (87.18%), Query Frame = 1
Query:    1 MLRTGQTAPSFSLPDADMQTVSLAAFKGRKNVVLYFYPRDGTPGCTMEAIEFSDHEEQFGRHDCVILGISRDDCMVHAEFRDKHGLSVNLLSDYEGEVCRKYGVLQEKESEGV-KRLFLVRSTFVIDKKGVIRHAHYGVTPRGHALEVFEAVKKLK 465
            ML+ GQ AP+F LPDADMQTV+L+ FKG+K VVLYFYPRDGTPGCT+   +FSDHE+QFG+HDCV++G+SRDDC+ HA+FRD+HG+++ LLSD EGEVCRKYGVLQEKE EG  +R  LVRSTF++DKKGVIRHA YGV PRGHA EVF+ +K+L+
Sbjct:    1 MLQPGQPAPTFELPDADMQTVALSTFKGKKTVVLYFYPRDGTPGCTLVTTDFSDHEDQFGKHDCVVIGVSRDDCLTHADFRDRHGVTIALLSDTEGEVCRKYGVLQEKEVEGAGRRECLVRSTFIVDKKGVIRHAAYGVNPRGHAAEVFDLIKRLR 156          
BLAST of mRNA_P-wetherbeei_contig9528.3.1 vs. uniprot
Match: A0A177R0E9_9PROT (Thioredoxin peroxidase n=1 Tax=Betaproteobacteria bacterium SCGC AG-212-J23 TaxID=1799662 RepID=A0A177R0E9_9PROT)

HSP 1 Score: 245 bits (625), Expect = 4.390e-81
Identity = 110/155 (70.97%), Postives = 133/155 (85.81%), Query Frame = 1
Query:    1 MLRTGQTAPSFSLPDADMQTVSLAAFKGRKNVVLYFYPRDGTPGCTMEAIEFSDHEEQFGRHDCVILGISRDDCMVHAEFRDKHGLSVNLLSDYEGEVCRKYGVLQEKESEGVKRLFLVRSTFVIDKKGVIRHAHYGVTPRGHALEVFEAVKKLK 465
            ML  GQ AP+F LPDADMQ V L+AFKG+K+VVLYFYP+DGTPGCT+   +FSDHE+QF +HDCV+LG+SRDDC+ HA+FRD++GL++ LLSD EGEVCRKYGVLQEKE  G +R  LVRSTF+IDKKGVIRHA YGV PRGHA EVF+ V++L+
Sbjct:    1 MLEPGQAAPTFELPDADMQPVDLSAFKGKKHVVLYFYPKDGTPGCTLVTTDFSDHEDQFVKHDCVVLGVSRDDCLTHADFRDRNGLTIGLLSDPEGEVCRKYGVLQEKEENGCRRECLVRSTFIIDKKGVIRHAAYGVNPRGHAAEVFDVVRRLR 155          
BLAST of mRNA_P-wetherbeei_contig9528.3.1 vs. uniprot
Match: A0A1F4ATK1_9PROT (Thioredoxin peroxidase n=4 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4ATK1_9PROT)

HSP 1 Score: 244 bits (624), Expect = 6.240e-81
Identity = 111/154 (72.08%), Postives = 136/154 (88.31%), Query Frame = 1
Query:    1 MLRTGQTAPSFSLPDADMQTVSLAAFKGRKNVVLYFYPRDGTPGCTMEAIEFSDHEEQFGRHDCVILGISRDDCMVHAEFRDKHGLSVNLLSDYEGEVCRKYGVLQEKESEGVKRLFLVRSTFVIDKKGVIRHAHYGVTPRGHALEVFEAVKKL 462
            M++ GQTAP+F+L DADMQ V LA+FKG++NVVL+FYPRDGTPGCT+EA +FSDHE+QF RHDCVILG+SRDDC+ HAEFRD++GLS+ LL+D EGEVCR YGVLQEK++EGV+R  LVRSTFVIDK+GV+RHA YGV PR HA E+F+ V+ L
Sbjct:    1 MIQKGQTAPAFALHDADMQPVKLASFKGKRNVVLFFYPRDGTPGCTLEACDFSDHEDQFVRHDCVILGVSRDDCLTHAEFRDRNGLSIRLLADPEGEVCRLYGVLQEKQTEGVRRECLVRSTFVIDKRGVVRHAAYGVNPRHHAAEIFDVVRTL 154          
BLAST of mRNA_P-wetherbeei_contig9528.3.1 vs. uniprot
Match: A0A537CRT8_9PROT (Thioredoxin peroxidase n=4 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537CRT8_9PROT)

HSP 1 Score: 240 bits (613), Expect = 3.060e-79
Identity = 111/156 (71.15%), Postives = 135/156 (86.54%), Query Frame = 1
Query:    1 MLRTGQTAPSFSLPDADMQTVSLAAFKGRKNVVLYFYPRDGTPGCTMEAIEFSDHEEQFGRHDCVILGISRDDCMVHAEFRDKHGLSVNLLSDYEGEVCRKYGVLQEKESE-GVKRLFLVRSTFVIDKKGVIRHAHYGVTPRGHALEVFEAVKKLK 465
            ML+ GQ APSF+LPDADMQTVSL AF+G+K+VV+YFYPRDGTPGCT+   +FSDHE+QF + DCV+LG+SRDDC+ HA+FRDKHG+++ LLSD EGEVCR YGVLQEK+SE G +R  L+RSTFVIDKKGVIRHA Y V PRGHA EV++ VK+L+
Sbjct:    1 MLQPGQPAPSFALPDADMQTVSLQAFRGKKHVVIYFYPRDGTPGCTLVTTDFSDHEDQFDKFDCVVLGVSRDDCLTHADFRDKHGVTIALLSDPEGEVCRMYGVLQEKQSEDGARRECLIRSTFVIDKKGVIRHAAYDVKPRGHAAEVYDLVKRLR 156          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9528.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1F4F543_9PROT2.380e-8574.84Thioredoxin peroxidase n=1 Tax=Betaproteobacteria ... [more]
A0A0S8B694_9PROT9.680e-8574.84Thioredoxin peroxidase n=1 Tax=Betaproteobacteria ... [more]
A0A1F4CVW3_9PROT4.070e-8473.08Thioredoxin peroxidase n=1 Tax=Betaproteobacteria ... [more]
A0A521YZY5_9PROT7.940e-8472.26Thioredoxin peroxidase n=2 Tax=unclassified Betapr... [more]
A0A1F3YS53_9PROT1.320e-8272.90Thioredoxin peroxidase n=1 Tax=Betaproteobacteria ... [more]
UPI0019A60AF03.770e-8274.19Peroxiredoxin n=1 Tax=Candidatus Parcubacteria bac... [more]
A0A536X9C1_9PROT3.900e-8271.15Thioredoxin peroxidase n=4 Tax=Betaproteobacteria ... [more]
A0A177R0E9_9PROT4.390e-8170.97Thioredoxin peroxidase n=1 Tax=Betaproteobacteria ... [more]
A0A1F4ATK1_9PROT6.240e-8172.08Thioredoxin peroxidase n=4 Tax=unclassified Betapr... [more]
A0A537CRT8_9PROT3.060e-7971.15Thioredoxin peroxidase n=4 Tax=Betaproteobacteria ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig9528contigP-wetherbeei_contig9528:1615..2085 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog640081.Dsui_2873
PFAMsAhpC-TSA
Model size471
Max annot lvl206389|Rhodocyclales
KEGG koko:K03564
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.13e-73
EggNOG OGsCOG1225@1|root,COG1225@2|Bacteria,1RD4R@1224|Proteobacteria,2VRCR@28216|Betaproteobacteria,2KW89@206389|Rhodocyclales
EC1.11.1.15
DescriptionBacterial protein of unknown function (DUF899)
Cds size471
COG categoryO
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683187097.5180676-CDS-P-wetherbeei_contig9528:1614..20851683187097.5180676-CDS-P-wetherbeei_contig9528:1614..2085Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig9528 1615..2085 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig9528.3.1prot_P-wetherbeei_contig9528.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig9528 1615..2085 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig9528.3.1

>prot_P-wetherbeei_contig9528.3.1 ID=prot_P-wetherbeei_contig9528.3.1|Name=mRNA_P-wetherbeei_contig9528.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=157bp
MLRTGQTAPSFSLPDADMQTVSLAAFKGRKNVVLYFYPRDGTPGCTMEAI
EFSDHEEQFGRHDCVILGISRDDCMVHAEFRDKHGLSVNLLSDYEGEVCR
KYGVLQEKESEGVKRLFLVRSTFVIDKKGVIRHAHYGVTPRGHALEVFEA
VKKLKP*
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mRNA from alignment at P-wetherbeei_contig9528:1615..2085+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig9528.3.1 ID=mRNA_P-wetherbeei_contig9528.3.1|Name=mRNA_P-wetherbeei_contig9528.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=471bp|location=Sequence derived from alignment at P-wetherbeei_contig9528:1615..2085+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGCGTACGGGACAAACAGCGCCTTCGTTCTCCCTGCCGGATGCGGA CATGCAGACGGTCAGCCTCGCCGCGTTCAAGGGGCGCAAGAACGTGGTCC TGTACTTCTATCCGCGCGACGGCACGCCTGGGTGCACGATGGAAGCGATC GAGTTTTCCGACCACGAGGAGCAGTTCGGCCGGCACGATTGCGTCATACT CGGCATTTCCCGCGACGATTGCATGGTGCACGCGGAATTCCGGGACAAGC ACGGCCTCTCGGTCAACCTGCTGTCCGACTACGAGGGCGAGGTATGCCGC AAGTACGGCGTGCTGCAGGAAAAGGAGTCCGAAGGCGTGAAGCGGCTGTT CCTGGTGCGTTCCACTTTCGTGATCGACAAGAAGGGCGTGATCCGCCACG CCCACTACGGCGTCACCCCGCGCGGCCACGCGCTCGAGGTGTTCGAGGCC GTGAAGAAACTTAAGCCCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig9528:1615..2085+

>mRNA_P-wetherbeei_contig9528.3.1 ID=mRNA_P-wetherbeei_contig9528.3.1|Name=mRNA_P-wetherbeei_contig9528.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=471bp|location=Sequence derived from alignment at P-wetherbeei_contig9528:1615..2085+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCTGCGTACGGGACAAACAGCGCCTTCGTTCTCCCTGCCGGATGCGGA
CATGCAGACGGTCAGCCTCGCCGCGTTCAAGGGGCGCAAGAACGTGGTCC
TGTACTTCTATCCGCGCGACGGCACGCCTGGGTGCACGATGGAAGCGATC
GAGTTTTCCGACCACGAGGAGCAGTTCGGCCGGCACGATTGCGTCATACT
CGGCATTTCCCGCGACGATTGCATGGTGCACGCGGAATTCCGGGACAAGC
ACGGCCTCTCGGTCAACCTGCTGTCCGACTACGAGGGCGAGGTATGCCGC
AAGTACGGCGTGCTGCAGGAAAAGGAGTCCGAAGGCGTGAAGCGGCTGTT
CCTGGTGCGTTCCACTTTCGTGATCGACAAGAAGGGCGTGATCCGCCACG
CCCACTACGGCGTCACCCCGCGCGGCCACGCGCTCGAGGTGTTCGAGGCC
GTGAAGAAACTTAAGCCCTGA
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