mRNA_P-wetherbeei_contig9522.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig9522.1.1 vs. uniprot
Match: B8C3C1_THAPS (Nuclear transport factor 2 n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C3C1_THAPS) HSP 1 Score: 79.7 bits (195), Expect = 1.270e-17 Identity = 36/58 (62.07%), Postives = 43/58 (74.14%), Query Frame = 1 Query: 37 KTLDVQPSVDPNALCIFVTGHVKIDGGNPLQFAEFFHLVKTPTGQWIVHNEMFRFIYS 210 KT D+QPS DPNA+ IFVTG ++I G NPL F EFFHLV T GQ+ VHN++FR Y Sbjct: 63 KTTDIQPSNDPNAIVIFVTGAIQIGGDNPLHFCEFFHLVGTGPGQYYVHNDVFRLNYG 120
BLAST of mRNA_P-wetherbeei_contig9522.1.1 vs. uniprot
Match: A0A836CA84_9STRA (Nuclear transport factor 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA84_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 1.750e-17 Identity = 34/63 (53.97%), Postives = 45/63 (71.43%), Query Frame = 1 Query: 22 LDFSAKTLDVQPSVDPNALCIFVTGHVKIDGGNPLQFAEFFHLVKTPTGQWIVHNEMFRFIYS 210 L F TLDVQPSVD NA+CI +TG VKID NP+ + +FF LV + Q+ VHN++FR +Y+ Sbjct: 58 LAFDQNTLDVQPSVDANAICIHITGKVKIDSNNPIHYTQFFQLVASGPSQYYVHNDIFRLVYA 120
BLAST of mRNA_P-wetherbeei_contig9522.1.1 vs. uniprot
Match: A0A7S1UZF9_9STRA (Nuclear transport factor 2 n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UZF9_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 1.180e-15 Identity = 33/58 (56.90%), Postives = 41/58 (70.69%), Query Frame = 1 Query: 37 KTLDVQPSVDPNALCIFVTGHVKIDGGNPLQFAEFFHLVKTPTGQWIVHNEMFRFIYS 210 K+ DVQPS DPNA+ IFVTG VKI G NPL + E F L+ T GQ+++HN +FR Y Sbjct: 63 KSTDVQPSNDPNAILIFVTGAVKIGGDNPLHYCEMFQLIATAPGQYVIHNNVFRLNYG 120
BLAST of mRNA_P-wetherbeei_contig9522.1.1 vs. uniprot
Match: A0A7S3L787_9STRA (Nuclear transport factor 2 (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L787_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 1.210e-15 Identity = 34/58 (58.62%), Postives = 42/58 (72.41%), Query Frame = 1 Query: 37 KTLDVQPSVDPNALCIFVTGHVKIDGGNPLQFAEFFHLVKTPTGQWIVHNEMFRFIYS 210 K++DVQPS +P A+ IFVTG V+IDGGNPL F E F LV T G + VHN++FR Y Sbjct: 64 KSMDVQPSQNPQAMIIFVTGTVRIDGGNPLHFCEVFQLVSTGPGAYYVHNDVFRLNYG 121
BLAST of mRNA_P-wetherbeei_contig9522.1.1 vs. uniprot
Match: B7G8V7_PHATC (Nuclear transport factor 2 n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G8V7_PHATC) HSP 1 Score: 73.9 bits (180), Expect = 2.370e-15 Identity = 34/66 (51.52%), Postives = 43/66 (65.15%), Query Frame = 1 Query: 13 TTHLDFSAKTLDVQPSVDPNALCIFVTGHVKIDGGNPLQFAEFFHLVKTPTGQWIVHNEMFRFIYS 210 T + + K+ DVQPS +PNA+ IFVTG +KI G NPL F E F LV T G + VHN++FR Y Sbjct: 55 TGQVQHTVKSTDVQPSSNPNAILIFVTGSIKIGGDNPLHFCEMFQLVSTAPGAYYVHNDIFRLNYG 120
BLAST of mRNA_P-wetherbeei_contig9522.1.1 vs. uniprot
Match: A0A7S3NPH7_9STRA (Nuclear transport factor 2 n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NPH7_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 1.250e-12 Identity = 29/58 (50.00%), Postives = 42/58 (72.41%), Query Frame = 1 Query: 37 KTLDVQPSVDPNALCIFVTGHVKIDGGNPLQFAEFFHLVKTPTGQWIVHNEMFRFIYS 210 +T++VQPSV PNA+ IFVTG + I+ PL++ + F LV GQ+ +HN++FRF YS Sbjct: 64 QTIEVQPSVTPNAILIFVTGQIMIEQDKPLKYTQLFQLVGEGPGQYYLHNDIFRFNYS 121
BLAST of mRNA_P-wetherbeei_contig9522.1.1 vs. uniprot
Match: A0A7S1FRI8_9STRA (Nuclear transport factor 2 n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FRI8_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 5.940e-11 Identity = 30/56 (53.57%), Postives = 37/56 (66.07%), Query Frame = 1 Query: 43 LDVQPSVDPNALCIFVTGHVKIDGGNPLQFAEFFHLVKTPTGQWIVHNEMFRFIYS 210 +D QPS +PNA+ IFVTG VKI G N + F E F L+ T G + VHNE+FR Y Sbjct: 67 VDCQPSNNPNAILIFVTGSVKIGGPNAVHFCEMFQLLSTGPGAYHVHNEIFRLNYG 122
BLAST of mRNA_P-wetherbeei_contig9522.1.1 vs. uniprot
Match: M2QBP8_CERS8 (Nuclear transport factor 2 n=1 Tax=Ceriporiopsis subvermispora (strain B) TaxID=914234 RepID=M2QBP8_CERS8) HSP 1 Score: 55.1 bits (131), Expect = 6.140e-8 Identity = 28/65 (43.08%), Postives = 41/65 (63.08%), Query Frame = 1 Query: 19 HLDFSAKTLDVQPSVDPNALCIFVTGHVKIDGG-NPLQFAEFFHLVKTPTGQWIVHNEMFRFIYS 210 ++ TLD QPS +P A+ + VTG + +DGG NPLQF++ F LV + G + V N++FR Y Sbjct: 60 NVQHKVTTLDAQPSTNPGAIIVSVTGLLLVDGGENPLQFSQVFQLVPSD-GTYFVFNDIFRLNYG 123
BLAST of mRNA_P-wetherbeei_contig9522.1.1 vs. uniprot
Match: A0A2C6ABI9_9HYPO (Nuclear transport factor 2 n=1 Tax=Cordyceps sp. RAO-2017 TaxID=2004951 RepID=A0A2C6ABI9_9HYPO) HSP 1 Score: 53.5 bits (127), Expect = 2.490e-7 Identity = 23/59 (38.98%), Postives = 37/59 (62.71%), Query Frame = 1 Query: 37 KTLDVQPSVDPNALCIFVTGHVKIDGGN-PLQFAEFFHLVKTPTGQWIVHNEMFRFIYS 210 TLD QPS+ ++ I VTG + +D P+ F + F LV+ P+GQ+ V N++F+ +Y Sbjct: 67 STLDAQPSITEGSIVILVTGQLLVDEEQRPMNFTQTFQLVRDPSGQYFVFNDIFKLVYG 125
BLAST of mRNA_P-wetherbeei_contig9522.1.1 vs. uniprot
Match: A0A024GPP1_9STRA (Nuclear transport factor 2 n=2 Tax=Albugo TaxID=65356 RepID=A0A024GPP1_9STRA) HSP 1 Score: 50.8 bits (120), Expect = 2.560e-6 Identity = 24/55 (43.64%), Postives = 33/55 (60.00%), Query Frame = 1 Query: 46 DVQPSVDPNALCIFVTGHVKIDGGNPLQFAEFFHLVKTPTGQWIVHNEMFRFIYS 210 DVQ S A+ IFV G V+ID +QF + F LV +GQ+ +HN++FR Y Sbjct: 67 DVQMSTSNTAMIIFVQGKVQIDENPQVQFTQVFQLVAIASGQYYIHNDIFRLQYG 121 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig9522.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig9522.1.1 >prot_P-wetherbeei_contig9522.1.1 ID=prot_P-wetherbeei_contig9522.1.1|Name=mRNA_P-wetherbeei_contig9522.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=71bp MWLQTTHLDFSAKTLDVQPSVDPNALCIFVTGHVKIDGGNPLQFAEFFHLback to top mRNA from alignment at P-wetherbeei_contig9522:1886..2271+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig9522.1.1 ID=mRNA_P-wetherbeei_contig9522.1.1|Name=mRNA_P-wetherbeei_contig9522.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=386bp|location=Sequence derived from alignment at P-wetherbeei_contig9522:1886..2271+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig9522:1886..2271+ >mRNA_P-wetherbeei_contig9522.1.1 ID=mRNA_P-wetherbeei_contig9522.1.1|Name=mRNA_P-wetherbeei_contig9522.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=213bp|location=Sequence derived from alignment at P-wetherbeei_contig9522:1886..2271+ (Phaeothamnion wetherbeei SAG_119_79)back to top |