mRNA_P-wetherbeei_contig949.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig949.1.1 vs. uniprot
Match: D7FN17_ECTSI (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN17_ECTSI) HSP 1 Score: 214 bits (545), Expect = 8.170e-67 Identity = 116/219 (52.97%), Postives = 145/219 (66.21%), Query Frame = 1 Query: 10 SKVKVVYLALYNWWCAAGWCFVGSVIFKAVRDGKPPAAAYAESEFVLKSVQTLALLEVVHAAVGLVRSPWTTTLVQVLSRLLVVWCFLDRCHECEASVGFLLCAGSWAAVEVPRYLFYAFNVLGGVPEALFFLRYTLFAVLYPTGITGEIVTMLAGLPCIKALPANFNLG----PVTPYHMALFALATYVPGAPYMYLHMVKTRKSAFKKRREGAAVKA 654 S +K VYL YN CA+GW +V + G P A Y E E VL+ VQT AL+EV+HA +G+VRSPW TTL+QV SR+++VW F+ + +G +LC SWA VE+PRYLFY F VL P LF+LRY+LFAVLYPTGI GE++TMLAGLP +K LG V+ Y + L LA YVPG PYMY++MV R+SAFKKR GA+ KA Sbjct: 3 SPIKDVYLIAYNLACASGWSYVLFACVSHILAGNEPQALYDEVEKVLQIVQTAALMEVLHAMLGVVRSPWVTTLMQVSSRIILVWGFMWAVPSTQGQLGSMLCITSWACVEIPRYLFYTFGVLKSSPFPLFYLRYSLFAVLYPTGIAGEVMTMLAGLPDLKNAQDTLRLGVGPISVSGYIVTLALLAVYVPGGPYMYMNMVGNRRSAFKKRNAGASKKA 221
BLAST of mRNA_P-wetherbeei_contig949.1.1 vs. uniprot
Match: A0A835ZGJ3_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGJ3_9STRA) HSP 1 Score: 199 bits (507), Expect = 4.080e-61 Identity = 106/204 (51.96%), Postives = 135/204 (66.18%), Query Frame = 1 Query: 28 YLALYNWWCAAGWCFVGSVIFKAVRDGKPPAAAYAESEFVLKSVQTLALLEVVHAAVGLVRSPWTTTLVQVLSRLLVVWCFLDRCHECEASVGFLLCAGSWAAVEVPRYLFYAFNVLGGVPEALFFLRYTLFAVLYPTGITGEIVTMLAGLPCIKAL-PANFNLG-PVTPYHMALFALATYVPGAPYMYLHMVKTRKSAFKKRR 633 YL YN CA GW F + KA +G + + +VQT+A++E++H+ VGLV SPW TTL+QV SRL+V W FL C + L SWA VEVPRYLFY FN++G VP LF+LRY+LFAVLYP+GITGEI+T++ G C+KAL P G ++ YHMAL LATYVPGAP+MY HMV TR+ FK+R+ Sbjct: 7 YLGAYNLACAGGWAFALVLFAKAQYEGASWRETWNSMSTTVMAVQTVAVMEILHSLVGLVPSPWMTTLLQVSSRLVVAWGFLYSCEASQDHYAMALTTVSWALVEVPRYLFYVFNIMGNVPYPLFWLRYSLFAVLYPSGITGEIMTIVNGFDCLKALKPVPLAGGISISMYHMALLVLATYVPGAPFMYSHMVTTRRKQFKRRK 210
BLAST of mRNA_P-wetherbeei_contig949.1.1 vs. uniprot
Match: A0A6G0XHX3_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XHX3_9STRA) HSP 1 Score: 168 bits (425), Expect = 1.230e-48 Identity = 96/222 (43.24%), Postives = 133/222 (59.91%), Query Frame = 1 Query: 16 VKVVYLALYNWWCAAGWCFVGSVIFKAVRDGK----PPAAAYAESEFVLKSVQTLALLEVVHAAVGLVRSPWTTTLVQVLSRLLVVWCFLDRCHECEASVGFLLCAGSWAAVEVPRYLFYAFNVLGGVPEALFFLRYTLFAVLYPTGITGEIVTMLAGLPCIK------ALPANFNLGPVTPYHMALFALATYVPGAPYMYLHMVKTRKSAFKKRREGAAVK 651 +K +YL LYN C AGW +V + F+ V + A +A E LK VQT A++E++HA VG+VRSP +T++QV SRL ++W D E A GF++ SW+ VEVPRY FYA N+ VP+ LFFLRY LF VLYPTGI+GE+ ML+ LP + +P + N+ ++ M L YVPG+P+MY +M RK A+ K+ E +K Sbjct: 2 IKNLYLTLYNLACCAGWAYVLGLTFQTVNQDRNIDVSAAKLWAIVEIPLKIVQTAAIMEILHAMVGIVRSPVFSTVLQVSSRLALLWMINDLVPETRAHWGFVMMVTSWSLVEVPRYAFYALNLWNAVPDWLFFLRYHLFMVLYPTGISGEVSCMLSALPYVTNGAYAIQMPNDHNVA-ISLQFMIYLTLVVYVPGSPFMYQNMNNMRKKAYAKKNEAKTLK 222
BLAST of mRNA_P-wetherbeei_contig949.1.1 vs. uniprot
Match: A0A7S3HHK7_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HHK7_9STRA) HSP 1 Score: 165 bits (418), Expect = 1.470e-47 Identity = 94/210 (44.76%), Postives = 124/210 (59.05%), Query Frame = 1 Query: 16 VKVVYLALYNWWCAAGWCFVGSVIFKAVRDGKPPAAAYAESEFVLKSVQTLALLEVVHAAVGLVRSPWTTTLVQVLSRLLVVWCFLDRCHECEASVGFLLCAGSWAAVEVPRYLFYAFNVLGGVPEALFFLRYTLFAVLYPTGITGEIVTMLAGLPCIKALPANFNLGPVTPYHMALFALA--TYVPGAPYMYLHMVKTRKSAFKKRREG 639 + +VYL YN C AGW +V + K +R + A ++E E LK VQT A+LEV+H+ VGLV+SPW T +QV SR+ +W +D + +V F+L SW VEVPRYLFYA N+L VP LF+LRY+LFAVLYPTGITGE+ TM + H+ L TY+PG+P M+ HMVKTR F+ + G Sbjct: 5 LALVYLLAYNLACCAGWAYVLFICVKHIR-AETIADTWSEVELPLKIVQTAAVLEVLHSMVGLVKSPWATAFMQVFSRVWTLWAIMDTTDAAQTTVFFVLACTSWGLVEVPRYLFYALNLLNAVPYPLFWLRYSLFAVLYPTGITGELGTMYHAFNFFITQAPIQDQPLFRQIHLVSIVLVAITYIPGSPKMFGHMVKTRSKQFELYKNG 213
BLAST of mRNA_P-wetherbeei_contig949.1.1 vs. uniprot
Match: A0A024TZ79_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024TZ79_9STRA) HSP 1 Score: 162 bits (411), Expect = 1.670e-46 Identity = 96/225 (42.67%), Postives = 131/225 (58.22%), Query Frame = 1 Query: 7 LSKVKVVYLALYNWWCAAGWCFVGSVIFKAVRDGKPPAAAYAESEFV----LKSVQTLALLEVVHAAVGLVRSPWTTTLVQVLSRLLVVWCFLDRCHECEASVGFLLCAGSWAAVEVPRYLFYAFNVLGGVPEALFFLRYTLFAVLYPTGITGEIVTMLAGLPCIKA------LPANFNLGPVTPYHMALFALATYVPGAPYMYLHMVKTRKSAFKKRREGAAVK 651 ++ +K YL L+N + GW +V F+ V + A + A+ V LK VQT+A+ EV+HA +GLVRSP +TL+QV SRL +VW C + GF+L SW+ VEVPRY FYA N+L VP+ LFFLRY LF VLYP+G+TGE+ M+ LP + +P N+ V+ Y + L L Y PG P+MY HM RK A+ K+ E +K Sbjct: 1 MALIKTAYLVLFNLASSLGWAYVLGQTFQLVYADQDIALSSAKLWGVIDTPLKVVQTMAVFEVLHAMLGLVRSPVGSTLMQVSSRLFLVWAINVLCPDSRYHWGFILMVASWSLVEVPRYAFYALNLLEAVPDWLFFLRYHLFMVLYPSGVTGEVTCMVKALPFLSTGAYSIQMPNTHNIS-VSLYVIVLLTLVVYAPGLPFMYTHMNVQRKKAYAKKNETKTLK 224
BLAST of mRNA_P-wetherbeei_contig949.1.1 vs. uniprot
Match: A0A067CBA8_SAPPC (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CBA8_SAPPC) HSP 1 Score: 162 bits (410), Expect = 2.230e-46 Identity = 96/222 (43.24%), Postives = 126/222 (56.76%), Query Frame = 1 Query: 16 VKVVYLALYNWWCAAGWCFV-GSVIFKAVRDGKPPAAAYAESEFV---LKSVQTLALLEVVHAAVGLVRSPWTTTLVQVLSRLLVVWCFLDRCHECEASVGFLLCAGSWAAVEVPRYLFYAFNVLGGVPEALFFLRYTLFAVLYPTGITGEIVTMLAGLPCIKA------LPANFNLGPVTPYHMALFALATYVPGAPYMYLHMVKTRKSAFKKRREGAAVK 651 +K YL L+N GW +V G + + D + + + LK VQT+A++EVVHA +GLVRSP +T +QV SRL +VW C E GF+L SW VEVPRY FYA N+L VP+ LFFLRY LF VLYP+G+TGE+ ML LP + +P N+ V+ Y + L L YVPG P MY HM RK A+ K+ E ++K Sbjct: 2 IKTTYLVLFNVASCLGWAYVLGQTLQQLYADKDVATTSAGLWDLIGEPLKIVQTMAIMEVVHALIGLVRSPVGSTFMQVSSRLWLVWAINVLCPESRTHWGFVLMVASWGLVEVPRYAFYALNLLDAVPDWLFFLRYHLFMVLYPSGVTGEVTCMLKALPLLSTGAYSITMPNTHNIA-VSLYVIVLLTLVVYVPGLPVMYTHMNVQRKRAYAKKNETKSIK 222
BLAST of mRNA_P-wetherbeei_contig949.1.1 vs. uniprot
Match: A0A485KQR1_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KQR1_9STRA) HSP 1 Score: 160 bits (406), Expect = 8.900e-46 Identity = 93/217 (42.86%), Postives = 127/217 (58.53%), Query Frame = 1 Query: 16 VKVVYLALYNWWCAAGWCFVGSVIFKAVRDG----KPPAAAYAESEFVLKSVQTLALLEVVHAAVGLVRSPWTTTLVQVLSRLLVVWCFLDRCHECEASVGFLLCAGSWAAVEVPRYLFYAFNVLGGVPEALFFLRYTLFAVLYPTGITGEIVTMLAGLPCIKA------LPANFNLGPVTPYHMALFALATYVPGAPYMYLHMVKTRKSAFKKRRE 636 +K YL L+N GW +V F+ V K + E LK VQT+AL+EV+HA +GLVRSP +T +QV SRL ++W C + GF+L SW+ VEVPRY FYA N+L VP+ LFFLRY LF VLYP+GITGE+ ML LP + + +P N+ ++ Y + + L TY+PG+P+M+ HM RK A+ K+ E Sbjct: 2 IKTTYLVLFNLASCLGWAYVLGQTFQLVYADQDIEKSSQTLWGVVEGPLKIVQTMALMEVLHAMLGLVRSPVGSTFMQVSSRLFLLWAINVLCPDSRYHWGFILMVASWSLVEVPRYAFYALNLLDAVPDWLFFLRYHLFMVLYPSGITGEVTCMLKALPLLASGAYSVQMPNTHNVA-ISLYIVVVITLITYIPGSPFMFNHMNIQRKKAYAKKNE 217
BLAST of mRNA_P-wetherbeei_contig949.1.1 vs. uniprot
Match: A0A1V9YMC0_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YMC0_9STRA) HSP 1 Score: 160 bits (404), Expect = 1.780e-45 Identity = 96/222 (43.24%), Postives = 126/222 (56.76%), Query Frame = 1 Query: 16 VKVVYLALYNWWCAAGWCFVGSVIFKAVRDGKPPAAAYAESEFV----LKSVQTLALLEVVHAAVGLVRSPWTTTLVQVLSRLLVVWCFLDRCHECEASVGFLLCAGSWAAVEVPRYLFYAFNVLGGVPEALFFLRYTLFAVLYPTGITGEIVTMLAGLPCIKA------LPANFNLGPVTPYHMALFALATYVPGAPYMYLHMVKTRKSAFKKRREGAAVK 651 +K YL L+N GW +V + + K AA A + LK VQT+AL+EV+HA VGLVRSP +T +QV SRL +VW C E GF+L SW VEVPRY FYA N+L VP LFFLRY LF VLYP+G+TGE+ M+ LP + + +P N+ V+ Y + L + Y+PG P MY HM RK A+ K+ E ++K Sbjct: 2 IKTAYLVLFNVASCLGWAYVLGQTLQTLYTDKNIAATSAGLWDIIGEPLKIVQTMALMEVIHALVGLVRSPVGSTFMQVSSRLWLVWAINVLCPESRTHWGFVLMVMSWGLVEVPRYAFYALNLLDAVPNWLFFLRYHLFMVLYPSGVTGEVTCMIKSLPLLASGAYSITMPNTHNIA-VSLYVIVLIIMVIYIPGLPIMYSHMNVQRKKAYAKKNETKSIK 222
BLAST of mRNA_P-wetherbeei_contig949.1.1 vs. uniprot
Match: A0A8K1FNL1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FNL1_PYTOL) HSP 1 Score: 155 bits (391), Expect = 1.750e-43 Identity = 89/215 (41.40%), Postives = 126/215 (58.60%), Query Frame = 1 Query: 25 VYLALYNWWCAAGWCFV----GSVIFKAVRDGKP----PAAAYAESEFVLKSVQTLALLEVVHAAVGLVRSPWTTTLVQVLSRLLVVWCFLDRCHECEASVGFLLCAGSWAAVEVPRYLFYAFNVLGGVPEALFFLRYTLFAVLYPTGITGEIVTMLAGLPCIKA------LPANFNLGPVTPYHMALFALATYVPGAPYMYLHMVKTRKSAFKK 627 +YL YN AAGW FV + ++ + GK A + E+ LK VQT+A +E++HAA+G VRSP +TL+QV SRL +VW + C +GF L SW VEVPRY FYA N+ VP LFFLRY LF VLYP+G+ GE++ +++ LP ++ +P N+ ++ Y + L ++ TY+PG P MY HM+ R A+ K Sbjct: 8 LYLLAYNAVSAAGWAFVLYLAATTVWASYEQGKDVEAIARATWNAVEWPLKIVQTMAAMEIIHAALGFVRSPLGSTLIQVSSRLWLVWAINELCPISRYQIGFPLMVLSWGLVEVPRYSFYALNLYNLVPSFLFFLRYHLFMVLYPSGVAGEVLCLISALPYLQTGVYAIQMPNAHNVA-ISLYTVVLMSIVTYIPGLPVMYGHMLTQRNRAYSK 221
BLAST of mRNA_P-wetherbeei_contig949.1.1 vs. uniprot
Match: A0A0S4JJY4_BODSA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4JJY4_BODSA) HSP 1 Score: 165 bits (417), Expect = 1.930e-43 Identity = 98/215 (45.58%), Postives = 135/215 (62.79%), Query Frame = 1 Query: 28 YLALYNWWCAAGWCFVGSVIFKAVRDGKPPAAAYAESEFVLKSVQTLALLEVVHAAVGLVRSPWTTTLVQVLSRLLVVWCFLDRCHECEASVGFLLCAGSWAAVEVPRYLFYAFNVLGGVPEALFFLRYTLFAVLYPTGITGEIVTMLAGLPCIKALPANFNLGPVTPYHMALFALATYVPGAPYMYLHMVKTRKSAFKKRRE---GAAVKAAPA 663 YL LYN A GW +V + + +GK PAAA+ + L Q+LA LE++H+ + LV SP +T +QV SR V+W + E +A L SW+ VEVPRYLFYA N+LG VP LF+LRYTLFA+LYPTGI+GEI+ ++ LP + V ++++LF L+ Y+PG+P+M+LHMV RK +FK R+E A+ KAAPA Sbjct: 4 YLVLYNLVNAIGWAYVLYLSVTSFLEGKSPAAAWKAIQLPLLVTQSLAGLEILHSFLRLVPSPIMSTFMQVFSRYAVMWGYTYVFAEAQAHWSLYLMVTSWSLVEVPRYLFYAVNLLGSVPFPLFWLRYTLFAILYPTGISGEILQIVTSLPVLLRTS-------VPCWYLSLFLLSLYLPGSPFMFLHMVTQRKKSFKARKEKQLAASGKAAPA 211 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig949.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig949.1.1 >prot_P-wetherbeei_contig949.1.1 ID=prot_P-wetherbeei_contig949.1.1|Name=mRNA_P-wetherbeei_contig949.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=228bp SFLSKVKVVYLALYNWWCAAGWCFVGSVIFKAVRDGKPPAAAYAESEFVLback to top mRNA from alignment at P-wetherbeei_contig949:6..689+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig949.1.1 ID=mRNA_P-wetherbeei_contig949.1.1|Name=mRNA_P-wetherbeei_contig949.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=684bp|location=Sequence derived from alignment at P-wetherbeei_contig949:6..689+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig949:6..689+ >mRNA_P-wetherbeei_contig949.1.1 ID=mRNA_P-wetherbeei_contig949.1.1|Name=mRNA_P-wetherbeei_contig949.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=684bp|location=Sequence derived from alignment at P-wetherbeei_contig949:6..689+ (Phaeothamnion wetherbeei SAG_119_79)back to top |